BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000448
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communi...   427   e-117
ref|XP_002886035.1| hypothetical protein ARALYDRAFT_899930 [Arab...   426   e-117
ref|NP_565456.2| histone-binding protein RBBP4 [Arabidopsis thal...   426   e-117
gb|AFK36675.1| unknown [Medicago truncatula]                          424   e-116
ref|XP_003595171.1| Nucleosome/chromatin assembly factor group [...   424   e-116

>ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communis]
           gi|223546569|gb|EEF48067.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 503

 Score =  427 bits (1097), Expect = e-117
 Identities = 208/305 (68%), Positives = 242/305 (79%), Gaps = 25/305 (8%)
 Frame = -3

Query: 842 QQPKKRGR-PKGSKNKDDKESAGK---GAAVKMRTAGGGDKKVVVDEKYLQWKNLVPVLY 675
           Q PKKRGR PK  ++KD ++   +   G+ +K        ++  VDEKY QWK+LVPVLY
Sbjct: 6   QVPKKRGRKPKPKEDKDQQQQQQQQSAGSKMKEGKKSQQQQQHTVDEKYTQWKSLVPVLY 65

Query: 674 DWFANHNLIWPSLSCRWGPLLEELENKNRQRIYISEQTDGSVPNTLVIANCEVVKKRVAA 495
           DW ANHNL+WPSLSCRWGP LE+   KNRQR+Y+SEQTDGSVPNTLVIANCEVVK RVAA
Sbjct: 66  DWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAA 125

Query: 494 ADHVANFNEESRSPFVKKYKTIIHPGEVNRIRELPLNKNIIATHTDCPEVLIWDIEAQPN 315
           A+H+A FNEE+RSPFVKKYKTIIHPGEVNRIRELP N  I+ATHTD P+VLIWD+EAQPN
Sbjct: 126 AEHIAQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVATHTDGPDVLIWDVEAQPN 185

Query: 314 RHAVLGAAESHPDLVLTGHEENAEYALAMCPTEPYVLSGGRDRRVVFWSIQDHISTS--- 144
           RHAVLGA  S PDL+LTGH++NAE+ALAMCPTEP+VLSGG+D+ VV WSIQDHI+ S   
Sbjct: 186 RHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITASATD 245

Query: 143 ----------GSVVK--------PADSPSIGPRGIFQGHEDTVEDVQFCPTSAQEFCSVG 18
                     GS++K         A+SPS+GPRGI+QGHEDTVEDV FCP+SAQEFCSVG
Sbjct: 246 PATAKSPGSGGSIIKRAGEGNDRAAESPSVGPRGIYQGHEDTVEDVTFCPSSAQEFCSVG 305

Query: 17  DDSCL 3
           DDSCL
Sbjct: 306 DDSCL 310


>ref|XP_002886035.1| hypothetical protein ARALYDRAFT_899930 [Arabidopsis lyrata subsp.
           lyrata] gi|297331875|gb|EFH62294.1| hypothetical protein
           ARALYDRAFT_899930 [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score =  426 bits (1094), Expect = e-117
 Identities = 206/304 (67%), Positives = 242/304 (79%), Gaps = 18/304 (5%)
 Frame = -3

Query: 860 TTP---TASQQPKKRGRPKGSKNKDDKESAGKGAAVKMRTAGGGDKKVV-VDEKYLQWKN 693
           TTP   T +  PKKRGR   SK+     S+ + +  KM+ +G   ++   VDEKY QWK 
Sbjct: 14  TTPSGGTGASGPKKRGRKPKSKDYSQTPSSQQQSGGKMKESGKKTQQTPSVDEKYSQWKG 73

Query: 692 LVPVLYDWFANHNLIWPSLSCRWGPLLEELENKNRQRIYISEQTDGSVPNTLVIANCEVV 513
           LVP+LYDW ANHNL+WPSLSCRWGP LE+   KNRQR+Y+SEQTDGSVPNTLVIANCEVV
Sbjct: 74  LVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVV 133

Query: 512 KKRVAAADHVANFNEESRSPFVKKYKTIIHPGEVNRIRELPLNKNIIATHTDCPEVLIWD 333
           K RVAAA+H++ FNEE+RSPFVKKYKTIIHPGEVNRIRELP N  I+ATHTD P+VLIWD
Sbjct: 134 KPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWD 193

Query: 332 IEAQPNRHAVLGAAESHPDLVLTGHEENAEYALAMCPTEPYVLSGGRDRRVVFWSIQDHI 153
           +E QPNRHAVLGAA S PDL+LTGH++NAE+ALAMCPTEP+VLSGG+D+ VV WSIQDHI
Sbjct: 194 VETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHI 253

Query: 152 ST-------SGSVVKPA-------DSPSIGPRGIFQGHEDTVEDVQFCPTSAQEFCSVGD 15
           +T       SGS++K         +SP++GPRG++ GHEDTVEDV F PTSAQEFCSVGD
Sbjct: 254 TTVGTDSKSSGSIIKQTGEGSDKNESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGD 313

Query: 14  DSCL 3
           DSCL
Sbjct: 314 DSCL 317


>ref|NP_565456.2| histone-binding protein RBBP4 [Arabidopsis thaliana]
           gi|22096353|sp|O22607.3|MSI4_ARATH RecName: Full=WD-40
           repeat-containing protein MSI4; AltName: Full=Altered
           cold-responsive gene 1 protein
           gi|30268748|gb|AAP29474.1|AF498101_1 MSI4 [Arabidopsis
           thaliana] gi|30268750|gb|AAP29475.1|AF498102_1 MSI4
           [Arabidopsis thaliana] gi|16323103|gb|AAL15286.1|
           At2g19520/F3P11.12 [Arabidopsis thaliana]
           gi|16648859|gb|AAL24281.1| putative WD-40 repeat
           protein, MSI4 [Arabidopsis thaliana]
           gi|20148237|gb|AAM10009.1| putative WD-40 repeat
           protein, MSI4 [Arabidopsis thaliana]
           gi|61661316|gb|AAX51264.1| FVE [Arabidopsis thaliana]
           gi|330251797|gb|AEC06891.1| histone-binding protein
           RBBP4 [Arabidopsis thaliana]
          Length = 507

 Score =  426 bits (1094), Expect = e-117
 Identities = 206/304 (67%), Positives = 242/304 (79%), Gaps = 18/304 (5%)
 Frame = -3

Query: 860 TTP---TASQQPKKRGRPKGSKNKDDKESAGKGAAVKMRTAGGGDKKVV-VDEKYLQWKN 693
           TTP   T +  PKKRGR   +K      S+ + + VKM+ +G   ++   VDEKY QWK 
Sbjct: 14  TTPSGGTGASGPKKRGRKPKTKEDSQTPSSQQQSDVKMKESGKKTQQSPSVDEKYSQWKG 73

Query: 692 LVPVLYDWFANHNLIWPSLSCRWGPLLEELENKNRQRIYISEQTDGSVPNTLVIANCEVV 513
           LVP+LYDW ANHNL+WPSLSCRWGP LE+   KNRQR+Y+SEQTDGSVPNTLVIANCEVV
Sbjct: 74  LVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVV 133

Query: 512 KKRVAAADHVANFNEESRSPFVKKYKTIIHPGEVNRIRELPLNKNIIATHTDCPEVLIWD 333
           K RVAAA+H++ FNEE+RSPFVKKYKTIIHPGEVNRIRELP N  I+ATHTD P+VLIWD
Sbjct: 134 KPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWD 193

Query: 332 IEAQPNRHAVLGAAESHPDLVLTGHEENAEYALAMCPTEPYVLSGGRDRRVVFWSIQDHI 153
           +E QPNRHAVLGAA S PDL+LTGH++NAE+ALAMCPTEP+VLSGG+D+ VV WSIQDHI
Sbjct: 194 VETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHI 253

Query: 152 ST-------SGSVVKPA-------DSPSIGPRGIFQGHEDTVEDVQFCPTSAQEFCSVGD 15
           +T       SGS++K         +SP++GPRG++ GHEDTVEDV F PTSAQEFCSVGD
Sbjct: 254 TTIGTDSKSSGSIIKQTGEGTDKNESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGD 313

Query: 14  DSCL 3
           DSCL
Sbjct: 314 DSCL 317


>gb|AFK36675.1| unknown [Medicago truncatula]
          Length = 500

 Score =  424 bits (1090), Expect = e-116
 Identities = 202/305 (66%), Positives = 238/305 (78%), Gaps = 17/305 (5%)
 Frame = -3

Query: 866 METTPTASQQPKKRGRPKGSKNKDDKESA---------GKGAAVKMRTAGGGDKKVVVDE 714
           MET P+     KK  R +  K K+DK             K    + +      ++  VDE
Sbjct: 1   METPPSTGAVKKKETRGRKPKPKEDKREEPSQVKSPRESKKEKQQQQLHQQQQQQASVDE 60

Query: 713 KYLQWKNLVPVLYDWFANHNLIWPSLSCRWGPLLEELENKNRQRIYISEQTDGSVPNTLV 534
           KY QWK+LVPVLYDW ANHNL+WPSLSCRWGP LE+   KNRQR+Y+SEQTDGSVPNTLV
Sbjct: 61  KYSQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLV 120

Query: 533 IANCEVVKKRVAAADHVANFNEESRSPFVKKYKTIIHPGEVNRIRELPLNKNIIATHTDC 354
           IANCEVVK RVAAA+H++ FNEE+RSPFVKKYKTIIHPGEVNRIRELP N  I+ATHTD 
Sbjct: 121 IANCEVVKTRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDS 180

Query: 353 PEVLIWDIEAQPNRHAVLGAAESHPDLVLTGHEENAEYALAMCPTEPYVLSGGRDRRVVF 174
           P+VLIWD+E+QPNRHAVLGA  S PDL+LTGH++NAE+ALAMCPT+PYVLSGG+D+ VV 
Sbjct: 181 PDVLIWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTQPYVLSGGKDKTVVL 240

Query: 173 WSIQDHISTS--------GSVVKPADSPSIGPRGIFQGHEDTVEDVQFCPTSAQEFCSVG 18
           WSI+DHI+++        GS+ K ADSP++GPRGI+ GHEDTVEDV FCP+SAQEFCSVG
Sbjct: 241 WSIEDHITSAATDSNKSGGSIAKTADSPTVGPRGIYSGHEDTVEDVAFCPSSAQEFCSVG 300

Query: 17  DDSCL 3
           DDSCL
Sbjct: 301 DDSCL 305


>ref|XP_003595171.1| Nucleosome/chromatin assembly factor group [Medicago truncatula]
           gi|124360783|gb|ABN08755.1| WD40-like [Medicago
           truncatula] gi|217074306|gb|ACJ85513.1| unknown
           [Medicago truncatula] gi|355484219|gb|AES65422.1|
           Nucleosome/chromatin assembly factor group [Medicago
           truncatula]
          Length = 500

 Score =  424 bits (1090), Expect = e-116
 Identities = 202/305 (66%), Positives = 238/305 (78%), Gaps = 17/305 (5%)
 Frame = -3

Query: 866 METTPTASQQPKKRGRPKGSKNKDDKESA---------GKGAAVKMRTAGGGDKKVVVDE 714
           MET P+     KK  R +  K K+DK             K    + +      ++  VDE
Sbjct: 1   METPPSTGAVKKKETRGRKPKPKEDKREEPSQVKSPRESKKEKQQQQLHQQQQQQASVDE 60

Query: 713 KYLQWKNLVPVLYDWFANHNLIWPSLSCRWGPLLEELENKNRQRIYISEQTDGSVPNTLV 534
           KY QWK+LVPVLYDW ANHNL+WPSLSCRWGP LE+   KNRQR+Y+SEQTDGSVPNTLV
Sbjct: 61  KYSQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLV 120

Query: 533 IANCEVVKKRVAAADHVANFNEESRSPFVKKYKTIIHPGEVNRIRELPLNKNIIATHTDC 354
           IANCEVVK RVAAA+H++ FNEE+RSPFVKKYKTIIHPGEVNRIRELP N  I+ATHTD 
Sbjct: 121 IANCEVVKTRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDS 180

Query: 353 PEVLIWDIEAQPNRHAVLGAAESHPDLVLTGHEENAEYALAMCPTEPYVLSGGRDRRVVF 174
           P+VLIWD+E+QPNRHAVLGA  S PDL+LTGH++NAE+ALAMCPT+PYVLSGG+D+ VV 
Sbjct: 181 PDVLIWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTQPYVLSGGKDKTVVL 240

Query: 173 WSIQDHISTS--------GSVVKPADSPSIGPRGIFQGHEDTVEDVQFCPTSAQEFCSVG 18
           WSI+DHI+++        GS+ K ADSP++GPRGI+ GHEDTVEDV FCP+SAQEFCSVG
Sbjct: 241 WSIEDHITSAATDSNKSGGSIAKTADSPTVGPRGIYSGHEDTVEDVAFCPSSAQEFCSVG 300

Query: 17  DDSCL 3
           DDSCL
Sbjct: 301 DDSCL 305