BLASTX nr result

ID: Bupleurum21_contig00000435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000435
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267915.2| PREDICTED: regulatory protein recX-like [Vit...   214   3e-53
emb|CBI39797.3| unnamed protein product [Vitis vinifera]              214   3e-53
ref|XP_002300573.1| predicted protein [Populus trichocarpa] gi|2...   200   3e-49
ref|XP_003544586.1| PREDICTED: uncharacterized protein LOC100803...   190   3e-46
ref|NP_566448.1| regulatory protein RecX family protein [Arabido...   189   5e-46

>ref|XP_002267915.2| PREDICTED: regulatory protein recX-like [Vitis vinifera]
          Length = 301

 Score =  214 bits (544), Expect = 3e-53
 Identities = 126/286 (44%), Positives = 178/286 (62%), Gaps = 11/286 (3%)
 Frame = +2

Query: 14  PKKSSTTENSRSVVAPVNDLHKKGNHGSSELDVLELDVMDGGKIMGRCNGLG-KTMDRNQ 190
           PKKS   E+S+S+         K +      D + +   DGG+          K   +++
Sbjct: 24  PKKSYKVEDSKSL---------KSSEDEEIQDCVRIRASDGGRSYRTTFAWDEKNKIQDK 74

Query: 191 RPMDNLNFNDKAVEEETSD-------FESLEDTEELVQEMT--GKEDSGKL-AFQSNKSN 340
           RPM+NL F+ ++  E+  D       FE +++ E++V+E     ++D  +L   Q +KS 
Sbjct: 75  RPMNNLIFDAESESEDAIDCDVRVVDFEFMQEPEDVVKEFRIYQEKDYPELDVSQVSKSK 134

Query: 341 LDAVNLAVGYLSRRALTTVQLRKKLIAKRYPLHVVDEVIANFQIRKLLDDCQYAEAFSRS 520
            DA  LA+  L+ RA T V+L+KKL  KR    + + VI +FQ R L++D  YAE FSRS
Sbjct: 135 QDAEKLAIELLATRAYTAVELKKKLHGKRVACDITEAVINDFQSRGLINDALYAETFSRS 194

Query: 521 RFSSLSWGPGRIKQALYQKGVSEEDAEKAIKLVFKDGESAEDHQSSIGLSNSSLDQLFSQ 700
           R+SS SWGP RIKQAL++KGVSE DAEKA+KLVFKD  S  D +S  GLSN ++D LF Q
Sbjct: 195 RWSSSSWGPRRIKQALFKKGVSEADAEKAVKLVFKDDGSGGDQESRHGLSNLAMDHLFVQ 254

Query: 701 ASKRWLQSQVHPVDKRKSKLIQWLRYRGFNWGVVNVVLKKLESEFP 838
           ASK+WL+    P + RKS++I+WL+YRGF W VV+ +LKKLES++P
Sbjct: 255 ASKQWLRGHDVPRETRKSRIIRWLQYRGFTWAVVSFILKKLESQYP 300


>emb|CBI39797.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score =  214 bits (544), Expect = 3e-53
 Identities = 126/286 (44%), Positives = 178/286 (62%), Gaps = 11/286 (3%)
 Frame = +2

Query: 14  PKKSSTTENSRSVVAPVNDLHKKGNHGSSELDVLELDVMDGGKIMGRCNGLG-KTMDRNQ 190
           PKKS   E+S+S+         K +      D + +   DGG+          K   +++
Sbjct: 105 PKKSYKVEDSKSL---------KSSEDEEIQDCVRIRASDGGRSYRTTFAWDEKNKIQDK 155

Query: 191 RPMDNLNFNDKAVEEETSD-------FESLEDTEELVQEMT--GKEDSGKL-AFQSNKSN 340
           RPM+NL F+ ++  E+  D       FE +++ E++V+E     ++D  +L   Q +KS 
Sbjct: 156 RPMNNLIFDAESESEDAIDCDVRVVDFEFMQEPEDVVKEFRIYQEKDYPELDVSQVSKSK 215

Query: 341 LDAVNLAVGYLSRRALTTVQLRKKLIAKRYPLHVVDEVIANFQIRKLLDDCQYAEAFSRS 520
            DA  LA+  L+ RA T V+L+KKL  KR    + + VI +FQ R L++D  YAE FSRS
Sbjct: 216 QDAEKLAIELLATRAYTAVELKKKLHGKRVACDITEAVINDFQSRGLINDALYAETFSRS 275

Query: 521 RFSSLSWGPGRIKQALYQKGVSEEDAEKAIKLVFKDGESAEDHQSSIGLSNSSLDQLFSQ 700
           R+SS SWGP RIKQAL++KGVSE DAEKA+KLVFKD  S  D +S  GLSN ++D LF Q
Sbjct: 276 RWSSSSWGPRRIKQALFKKGVSEADAEKAVKLVFKDDGSGGDQESRHGLSNLAMDHLFVQ 335

Query: 701 ASKRWLQSQVHPVDKRKSKLIQWLRYRGFNWGVVNVVLKKLESEFP 838
           ASK+WL+    P + RKS++I+WL+YRGF W VV+ +LKKLES++P
Sbjct: 336 ASKQWLRGHDVPRETRKSRIIRWLQYRGFTWAVVSFILKKLESQYP 381


>ref|XP_002300573.1| predicted protein [Populus trichocarpa] gi|222847831|gb|EEE85378.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  200 bits (509), Expect = 3e-49
 Identities = 108/203 (53%), Positives = 144/203 (70%), Gaps = 2/203 (0%)
 Frame = +2

Query: 230 EEETSDFESLEDTEELVQE--MTGKEDSGKLAFQSNKSNLDAVNLAVGYLSRRALTTVQL 403
           E E    E + + EE V+E  M  ++D    +   +K   DA  +AVG L+RRA T V+L
Sbjct: 172 ESEPRSHELMGEPEEDVEESVMQQEKDISNQSMIVHKIMQDAEKVAVGLLARRAYTAVEL 231

Query: 404 RKKLIAKRYPLHVVDEVIANFQIRKLLDDCQYAEAFSRSRFSSLSWGPGRIKQALYQKGV 583
           RKKL  KR+P  +V+ VI +F+ R L++D  YAE +SRSR+SS SWGP RIK+AL  KGV
Sbjct: 232 RKKLHGKRFPPDIVEAVIGDFESRGLVNDGLYAETYSRSRWSSSSWGPRRIKKALSNKGV 291

Query: 584 SEEDAEKAIKLVFKDGESAEDHQSSIGLSNSSLDQLFSQASKRWLQSQVHPVDKRKSKLI 763
           SE D +KA+KLVF+DG+S ++ +S +G+S  S+DQL  QASK+WL+ Q  P D RKS+LI
Sbjct: 292 SEADTDKALKLVFEDGDS-DEQESKVGMSKISMDQLLIQASKQWLRGQDVPKDTRKSRLI 350

Query: 764 QWLRYRGFNWGVVNVVLKKLESE 832
           +WL+YRGFNW VVN VLKKLES+
Sbjct: 351 RWLQYRGFNWDVVNFVLKKLESQ 373


>ref|XP_003544586.1| PREDICTED: uncharacterized protein LOC100803154 [Glycine max]
          Length = 317

 Score =  190 bits (483), Expect = 3e-46
 Identities = 96/201 (47%), Positives = 139/201 (69%)
 Frame = +2

Query: 230 EEETSDFESLEDTEELVQEMTGKEDSGKLAFQSNKSNLDAVNLAVGYLSRRALTTVQLRK 409
           + E   F+ +E+  EL     G     +L  Q +K   D    A+  L+ RALT ++LRK
Sbjct: 113 DSEQDSFDQMEEVGELTIHEGGDSCDQEL-IQIDKFTSDVEEAAIKLLASRALTALELRK 171

Query: 410 KLIAKRYPLHVVDEVIANFQIRKLLDDCQYAEAFSRSRFSSLSWGPGRIKQALYQKGVSE 589
           KL+ KR+    V+ VI  FQ R  ++D  YAE FS+SR++S SWGP RIKQAL++KGVS+
Sbjct: 172 KLLGKRFSPDSVEAVINKFQRRGFINDRLYAETFSQSRWTSSSWGPRRIKQALFKKGVSQ 231

Query: 590 EDAEKAIKLVFKDGESAEDHQSSIGLSNSSLDQLFSQASKRWLQSQVHPVDKRKSKLIQW 769
            DAEKA+++VFKD + AEDH+S IGLS  S+D L++QASK+W +SQ    + RKS++++W
Sbjct: 232 ADAEKAVEVVFKDNDCAEDHKSVIGLSKHSMDHLYTQASKQWFRSQNVLKETRKSRIVRW 291

Query: 770 LRYRGFNWGVVNVVLKKLESE 832
           L+YRGF+W V+N++LKKL+ +
Sbjct: 292 LQYRGFDWHVINIILKKLDRQ 312


>ref|NP_566448.1| regulatory protein RecX family protein [Arabidopsis thaliana]
           gi|110743293|dbj|BAE99536.1| hypothetical protein
           [Arabidopsis thaliana] gi|332641798|gb|AEE75319.1|
           regulatory protein RecX family protein [Arabidopsis
           thaliana]
          Length = 382

 Score =  189 bits (481), Expect = 5e-46
 Identities = 94/179 (52%), Positives = 134/179 (74%), Gaps = 3/179 (1%)
 Frame = +2

Query: 302 DSGKLAFQSNKSNLDAVNLAVGYLSRRALTTVQLRKKLIAKRYPLHVVDEVIANFQIRKL 481
           +  K + ++ K+  DA ++A+ YL  RA +   L+KKLI K+YP+ VVD+VI +FQIR  
Sbjct: 200 EQAKSSKEACKTTQDAEHMAIRYLGLRAYSAADLKKKLIGKKYPIEVVDKVIDDFQIRGF 259

Query: 482 LDDCQYAEAFSRSRFSSLSWGPGRIKQALYQKGVSEEDAEKAIKLVFKD---GESAEDHQ 652
           ++D  YAE+F+RSR+SSLSWGP RIKQAL++KG+S +D+E AIKLVF+     E  E+ +
Sbjct: 260 VNDSLYAESFTRSRWSSLSWGPRRIKQALFKKGISNKDSETAIKLVFEKRQCNEGDEEAE 319

Query: 653 SSIGLSNSSLDQLFSQASKRWLQSQVHPVDKRKSKLIQWLRYRGFNWGVVNVVLKKLES 829
            + GLS  ++DQL+ QASKRWLQ +  P + RK+++I+WL+YRGFNWGVV  +LK+LES
Sbjct: 320 LNHGLSKEAVDQLYVQASKRWLQGRDLPTETRKTRVIRWLQYRGFNWGVVTQLLKRLES 378


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