BLASTX nr result

ID: Bupleurum21_contig00000426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000426
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524598.1| transcription factor, putative [Ricinus comm...   194   1e-47
ref|XP_002265377.2| PREDICTED: zinc finger protein CONSTANS-LIKE...   191   1e-46
ref|XP_002264506.2| PREDICTED: zinc finger protein CONSTANS-LIKE...   187   9e-46
gb|ADL36678.1| COL domain class transcription factor [Malus x do...   186   2e-45
ref|XP_002321208.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45

>ref|XP_002524598.1| transcription factor, putative [Ricinus communis]
           gi|223536151|gb|EEF37806.1| transcription factor,
           putative [Ricinus communis]
          Length = 414

 Score =  194 bits (492), Expect = 1e-47
 Identities = 95/154 (61%), Positives = 115/154 (74%), Gaps = 4/154 (2%)
 Frame = -3

Query: 589 CRSDAACLCLSCDRKIHSANALSRRHSRTLICEKCNLQPAVVRCAEESLSLCQNCDWTAH 410
           CRSDAACLCLSCDR +HSANALSRRHSRTL+CE+CN QPA++RCA+E LSLCQ CDW  H
Sbjct: 17  CRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALIRCADERLSLCQKCDWMVH 76

Query: 409 VN---ASGHKRQAVSCYSGCPSADELSSIWSFLLELPSAVG-SACEQGMGSMSIGDDSLT 242
            N   +S HKRQ ++CY+GCPSA ELSS+WSF+L+ PS  G S CEQ +G MSI +DS T
Sbjct: 77  GNSNSSSTHKRQTINCYTGCPSASELSSLWSFVLDFPSVDGESTCEQELGLMSIAEDSST 136

Query: 241 NAKAPPRSNKDQDISINVTSFENVNDSNDWKPSS 140
           N   PP    D+ IS NV+    VN++ +   SS
Sbjct: 137 NTWGPP----DKTISQNVSGAAAVNNACEIPKSS 166


>ref|XP_002265377.2| PREDICTED: zinc finger protein CONSTANS-LIKE 10 [Vitis vinifera]
          Length = 414

 Score =  191 bits (484), Expect = 1e-46
 Identities = 92/155 (59%), Positives = 112/155 (72%), Gaps = 5/155 (3%)
 Frame = -3

Query: 589 CRSDAACLCLSCDRKIHSANALSRRHSRTLICEKCNLQPAVVRCAEESLSLCQNCDWTAH 410
           CRSDAACLCLSCDR +HSANALSRRHSRTL+CE+CN QPA VRC EE +SLCQNC+W  H
Sbjct: 17  CRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPATVRCVEEKISLCQNCNWIGH 76

Query: 409 ---VNASGHKRQAVSCYSGCPSADELSSIWSFLLELPSAVGSACEQGMGSMSIGDDSLTN 239
               +AS HKRQ ++CYSGCPSA ELS IWSF+LE  S   S CEQGM  MS+ ++S+ +
Sbjct: 77  GSTTSASDHKRQTINCYSGCPSAAELSRIWSFVLEFLSVDDSNCEQGMVLMSLTENSVGS 136

Query: 238 AKAPPRSN--KDQDISINVTSFENVNDSNDWKPSS 140
              PP +N   D  ++    + ENV+ S+ W  SS
Sbjct: 137 CSLPPVNNNINDSTVAGRTNAQENVDKSDLWMASS 171


>ref|XP_002264506.2| PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Vitis
           vinifera] gi|296085061|emb|CBI28476.3| unnamed protein
           product [Vitis vinifera]
          Length = 415

 Score =  187 bits (476), Expect = 9e-46
 Identities = 100/211 (47%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
 Frame = -3

Query: 589 CRSDAACLCLSCDRKIHSANALSRRHSRTLICEKCNLQPAVVRCAEESLSLCQNCDWTAH 410
           CRSDAA LCLSCDR +HSANALSRRHSRTL+CE+CN QPA VRC EE +SLCQNCDWT H
Sbjct: 17  CRSDAASLCLSCDRHVHSANALSRRHSRTLLCERCNSQPAFVRCIEEKISLCQNCDWTGH 76

Query: 409 ---VNASGHKRQAVSCYSGCPSADELSSIWSFLLELPSAVGSACEQGMGSMSIGDDSLTN 239
                 S HK++ ++CYSGCPS++ LS++W F+L+LPS   S CEQG+  M + + S  N
Sbjct: 77  GGSTTTSSHKKETINCYSGCPSSEGLSTMWPFVLDLPSTGNSTCEQGLSLMCLNETSEMN 136

Query: 238 AKAPPRSNKDQDISINVTSFENVNDSNDWKPSS----------MPQPDEKL--VCQQYEF 95
           +  PP ++  QD S+ V     VND+N+   SS          +  P +KL       + 
Sbjct: 137 SWGPPGNSSRQDASLTV----EVNDANNVDKSSILIGSSSVPELNSPSQKLDQPSGSADL 192

Query: 94  TKSALSKIGAXXXXXXXXXXXXXDFNMDELD 2
           T   L   G              DFNMDE+D
Sbjct: 193 TLPKLLCPGTDDLGFCEDDSLYEDFNMDEVD 223


>gb|ADL36678.1| COL domain class transcription factor [Malus x domestica]
          Length = 409

 Score =  186 bits (473), Expect = 2e-45
 Identities = 89/134 (66%), Positives = 103/134 (76%), Gaps = 3/134 (2%)
 Frame = -3

Query: 589 CRSDAACLCLSCDRKIHSANALSRRHSRTLICEKCNLQPAVVRCAEESLSLCQNCDWTAH 410
           CRSDAACLCLSCDR +HSANALSRRH RTLICE+CN QPA+VRC EE +SLCQNCDW  H
Sbjct: 17  CRSDAACLCLSCDRNVHSANALSRRHLRTLICERCNSQPALVRCTEERVSLCQNCDWMGH 76

Query: 409 ---VNASGHKRQAVSCYSGCPSADELSSIWSFLLELPSAVGSACEQGMGSMSIGDDSLTN 239
               +ASGHKRQ ++CYSGCPS+ ELSSIWSF+ +LPS   SACEQ MG MSI ++S  +
Sbjct: 77  QASTSASGHKRQTLNCYSGCPSSAELSSIWSFVSDLPSNGESACEQEMGLMSIAENSTRS 136

Query: 238 AKAPPRSNKDQDIS 197
             +   SN  Q  S
Sbjct: 137 EWSQTESNTRQSAS 150


>ref|XP_002321208.1| predicted protein [Populus trichocarpa] gi|222861981|gb|EEE99523.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  186 bits (473), Expect = 2e-45
 Identities = 99/201 (49%), Positives = 126/201 (62%), Gaps = 5/201 (2%)
 Frame = -3

Query: 589 CRSDAACLCLSCDRKIHSANALSRRHSRTLICEKCNLQPAVVRCAEESLSLCQNCDWTAH 410
           CRSDAA LCLSCDR +HSANALS+RHSRTL+CE+CN QPA+VRCAEE +SLCQNCDW  H
Sbjct: 17  CRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSQPALVRCAEERISLCQNCDWIGH 76

Query: 409 ---VNASGHKRQAVSCYSGCPSADELSSIWSFLLELPSAVGSACEQGMGSMSIGDDSLTN 239
               +AS H+RQ ++ YSGCPSA ELSSIWSF+L+ PS   S CEQ +G MSI ++S T+
Sbjct: 77  GTSTSASTHRRQTINSYSGCPSASELSSIWSFVLDFPSRGESTCEQELGLMSIAENSTTD 136

Query: 238 AKAPPRSNKDQDIS--INVTSFENVNDSNDWKPSSMPQPDEKLVCQQYEFTKSALSKIGA 65
           +  P  +   Q+ S  + V     +  S  W  SS       +     + T+SA + +  
Sbjct: 137 SWGPTENTIGQNASGVVEVNDRREIAKSGVWLGSSSIPESSSVPNNLDQTTRSANTSL-- 194

Query: 64  XXXXXXXXXXXXXDFNMDELD 2
                        DFNMDE+D
Sbjct: 195 -----------PKDFNMDEMD 204


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