BLASTX nr result

ID: Bupleurum21_contig00000421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000421
         (1925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22123.3| unnamed protein product [Vitis vinifera]              280   1e-72
ref|XP_002327642.1| predicted protein [Populus trichocarpa] gi|2...   268   5e-69
ref|XP_003548829.1| PREDICTED: uncharacterized protein LOC100794...   259   2e-66
ref|XP_003519856.1| PREDICTED: uncharacterized protein LOC100819...   256   2e-65
ref|XP_003612233.1| ATP synthase subunit a chloroplastic [Medica...   255   3e-65

>emb|CBI22123.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  280 bits (715), Expect = 1e-72
 Identities = 198/501 (39%), Positives = 267/501 (53%), Gaps = 54/501 (10%)
 Frame = -1

Query: 1583 SPWTQVLVKGAESEQSVVIGARVS--EQMTNSIDCV------------KDASVVSNEVDN 1446
            SPWTQV V+G     +    + VS  EQ+  S DC             +D+S V  ++++
Sbjct: 39   SPWTQV-VRGESESITAAPSSPVSSQEQIVVSSDCSPTKATSDSPASPEDSSQVEAQLES 97

Query: 1445 SNAG----GVKQVWGKPLKGNGXXXXXXXXXXXXADEVSPVMDTYSWXXXXXXXXXXXXX 1278
            S+ G    G +  W KP  G                EV PVM   SW             
Sbjct: 98   SDNGNGNAGKRPAWNKPSNGVA--------------EVGPVMGASSWPALSESARASAKS 143

Query: 1277 XXXXXXXXXXXXXXXXXXXSNKQAIANTSSPT-----------STPNHVTNTRQKSMRRG 1131
                                + Q   N SSP+           STP+H   TRQKSM+RG
Sbjct: 144  ASDSLKSPTDGSISTPPAQVHVQGSGNASSPSHKQVNNNPIPSSTPSHALPTRQKSMKRG 203

Query: 1130 -------SNNGGFVQPSSPQPRAPAVELPLGKPGNTTGDSFSNK----EGGPKGGF---- 996
                   S N G  QP++PQ   P +E+P   P N++    +N+    EGG +GGF    
Sbjct: 204  DRSGGSSSANAGLPQPAAPQ--GPVMEVP---PNNSSPRDHTNRSIHPEGGQRGGFVPQS 258

Query: 995  --GNDHQPQRSNSFNRWGSGGQHQRGDGSYHHQSFGGRRDQDRGNQDWSTHRSYGSRENH 822
              GND+  QR +   R G+   H RGDGS+HH  +GGRRDQDR N DW+ HR++ +RE H
Sbjct: 259  HSGNDYPHQRGSY--RKGNSAPHSRGDGSHHH-GYGGRRDQDRVNHDWNPHRNF-NREPH 314

Query: 821  MQQQQRGAPRGYPRAPH--GPPFLTPLPVGPYPGHMGFPTDMPTPV--ILYQPP---ELL 663
            MQ   R   RG+ R P      F+ P  + P+ G+     ++ +PV  ++Y P    + L
Sbjct: 315  MQP--RVVARGFIRPPSHSSAQFIAPPHLRPF-GNPILYQELASPVSQVVYVPAPHADPL 371

Query: 662  RGVGPLMPPVAAHHMYSPSIPDQQVYVKIMNQIEYYFSNENLVKDTFLRRNMDEQGWVSI 483
            R V P + P+  H M+ P   D Q++ K++ QI+YYFSNENL+KD +LR+NMDEQGWV +
Sbjct: 372  RTV-PFVAPMP-HPMFFPP-QDHQLHAKLVAQIDYYFSNENLIKDIYLRQNMDEQGWVPV 428

Query: 482  KLIAGFKKVQNLTESIQQILDALQASTVVEVQNDKIRKRNEWMKWILAPGA-FSPVLSPQ 306
            KLIAGFKKV+ LTE+IQ IL+A++ STVVEVQ DK+RKR +WMKWI+ P   FSP+ SPQ
Sbjct: 429  KLIAGFKKVKLLTENIQLILEAVRTSTVVEVQGDKLRKRGDWMKWIMPPSVQFSPLSSPQ 488

Query: 305  ARAKSGHDMLAGQFQGVTLDE 243
            +   S +D LA +FQ VTL E
Sbjct: 489  SIGSSSYDTLAARFQNVTLGE 509


>ref|XP_002327642.1| predicted protein [Populus trichocarpa] gi|222836727|gb|EEE75120.1|
            predicted protein [Populus trichocarpa]
          Length = 550

 Score =  268 bits (684), Expect = 5e-69
 Identities = 183/486 (37%), Positives = 261/486 (53%), Gaps = 18/486 (3%)
 Frame = -1

Query: 1646 MAANVLSSVSGGDTSINSPRRS------PWTQVLVKGAESEQSVVIGARVSEQMTNSIDC 1485
            +AA+ +SS S   +S  S R +      PW ++ V+GAESE S    + V+EQ    +  
Sbjct: 23   IAADNISSSSNPVSSPQSRRAAGKQVSPPWARI-VRGAESEFSST-ASTVAEQAAAVL-- 78

Query: 1484 VKDASVVSNE-VDNSNAGGVKQVWGKPLKG-NGXXXXXXXXXXXXADEVSPVMDTYSWXX 1311
                 VV  E V++ N    + VW KPL   NG               +S      S   
Sbjct: 79   -----VVEEESVESENNASKRPVWNKPLTASNGPVEIGNVMGADSWPALSESAARASSST 133

Query: 1310 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNKQAIANTSSPTSTPNHVTNTRQKSMRRG 1131
                                          S+++ +AN+++  ST NH+   RQ+SM+R 
Sbjct: 134  KSSSDSLKGSLSDGSSSSVSVSQGIGTASSSSQKQVANSANTNSTSNHIVPVRQRSMKRS 193

Query: 1130 SNNGGFVQPSSPQPRAPAVELPLGKPGNTTGDSFSNKEGGPKGGFGNDHQPQRSNSFNRW 951
              N      +   P++P  +   G+  +    S  + +   +    NDH  Q+ NSF R 
Sbjct: 194  GAN---TTSNGGAPQSPGSQGATGEGHSNNSSSGDHGQRNSQSRSFNDHPQQQRNSF-RN 249

Query: 950  GSGGQHQRGDGSYHHQSFGGRR-DQDRGNQDWSTHRSYGSRENHMQQQQRGAPR--GYPR 780
             +GG H RGDGS+HH S+GGRR DQDR NQDW+ HR++     H+Q     + R   +P 
Sbjct: 250  RNGGPHSRGDGSHHH-SYGGRRNDQDRSNQDWNAHRNFNRDGGHVQPSPGVSARLMRHPP 308

Query: 779  APHGPP-----FLTPLPVGPYPGHMGFPTDMPTPVILYQP-PELLRGVGPLMPPVAAHHM 618
             P  PP     F+ P PV P+   MGFP DM +P+    P P+ +RGV  +  P+  H +
Sbjct: 309  PPPPPPAAATTFVAPPPVRPF-SPMGFP-DMRSPLYYVAPHPDSMRGVPIIAAPIPPHAV 366

Query: 617  YSPSIPDQQVYVKIMNQIEYYFSNENLVKDTFLRRNMDEQGWVSIKLIAGFKKVQNLTES 438
            +  S  D Q++ KI+ QI+YYFSNENL+KD +LR+NMD+QGWV IKLIA F KV  LT++
Sbjct: 367  FFSS--DPQLHNKILCQIDYYFSNENLIKDLYLRKNMDDQGWVPIKLIASFNKVLLLTDN 424

Query: 437  IQQILDALQASTVVEVQNDKIRKRNEWMKWIL-APGAFSPVLSPQARAKSGHDMLAGQFQ 261
            IQ ILDA++ S+VVE+Q +K+RKRN+W++WI+  P  F  V SPQ+  KSGHDMLA   Q
Sbjct: 425  IQLILDAIRNSSVVEIQGEKVRKRNDWLRWIMTTPIQFPNVSSPQSGEKSGHDMLAANVQ 484

Query: 260  GVTLDE 243
            G++L+E
Sbjct: 485  GISLEE 490


>ref|XP_003548829.1| PREDICTED: uncharacterized protein LOC100794531 [Glycine max]
          Length = 483

 Score =  259 bits (661), Expect = 2e-66
 Identities = 148/323 (45%), Positives = 195/323 (60%), Gaps = 14/323 (4%)
 Frame = -1

Query: 1172 NHVTNTRQKSMRRGSNN----GGFVQPSSPQPRAPAVELPLGKPGNTTGDSFSNKEGGPK 1005
            N+   T  KS +R ++N    GG+  P    P+ P        P  +   + + KE  P+
Sbjct: 133  NNTGQTHPKSFKRSNSNTYSNGGYHPPHMSGPQGPIA------PAGSHNYNSALKEHQPR 186

Query: 1004 GGF-GNDHQPQRSNSFNRWGSGGQHQRGDGSYHHQSFGGRRDQDRGNQDWSTHRSYGSRE 828
             GF  NDH P R NSF     GG HQRGDG +HH ++GGRRDQD GNQDW+ HR++  R+
Sbjct: 187  AGFLPNDHPPHR-NSFRHRNGGGPHQRGDGHHHHNNYGGRRDQDPGNQDWNNHRNFNGRD 245

Query: 827  NHMQQQQRGAPRGYPRAPHGPP-------FLTPLPVGPYPGHMGFPTDMPTPVILYQPPE 669
            N M      +PR  PR    PP       F  P P+ PY G +GF T++P  ++   PP 
Sbjct: 246  NFM------SPRFGPRFIRPPPPPNPAQLFPPPPPLRPYGGSIGF-TELPPQMVYVPPPP 298

Query: 668  L--LRGVGPLMPPVAAHHMYSPSIPDQQVYVKIMNQIEYYFSNENLVKDTFLRRNMDEQG 495
            L  +RGV P + P+  + M+   + D Q++ KI+NQI+YYFSNENLVKDT+LRRNMD+QG
Sbjct: 299  LESMRGV-PFVSPIPPNAMFFQPL-DNQLHTKIVNQIDYYFSNENLVKDTYLRRNMDDQG 356

Query: 494  WVSIKLIAGFKKVQNLTESIQQILDALQASTVVEVQNDKIRKRNEWMKWILAPGAFSPVL 315
            WV I LIAGFKKV+ LTE+IQ +LDA++ S+VVEVQ DKIR+RN+W +WIL  G     L
Sbjct: 357  WVPINLIAGFKKVKYLTENIQIVLDAVRTSSVVEVQGDKIRRRNDWRRWILPAG-----L 411

Query: 314  SPQARAKSGHDMLAGQFQGVTLD 246
             P  R       LA Q Q + L+
Sbjct: 412  VPNVRGSQTVGQLAEQVQNIALE 434


>ref|XP_003519856.1| PREDICTED: uncharacterized protein LOC100819612 [Glycine max]
          Length = 497

 Score =  256 bits (654), Expect = 2e-65
 Identities = 155/330 (46%), Positives = 200/330 (60%), Gaps = 12/330 (3%)
 Frame = -1

Query: 1199 NTSSPTSTPNHVTNTRQKSMRRG----SNNGGFVQPSSPQPRAPAVELPLGKPGNTTGDS 1032
            N     +  N+   T QKS +R     S+NGG   P    P+ P        P  +   +
Sbjct: 138  NVRDNANADNNTVQTHQKSFKRSNSNTSSNGGHHPPQMSGPQGPIA------PAGSHNYN 191

Query: 1031 FSNKEGGPKGGF-GNDHQPQRSNSFNRWGSGGQHQRGDGSYHHQSFGGRRDQD-RGNQDW 858
             S KE  P+ GF  NDH PQR NSF     GG HQRGDG +HH ++GGRRDQD RGNQDW
Sbjct: 192  SSPKEHQPRAGFFPNDHLPQR-NSFRYRNGGGPHQRGDG-HHHHNYGGRRDQDHRGNQDW 249

Query: 857  STHRSYGSRENHMQQQQRGAPRGY--PRAPHGPP-FLTPLPVGPYPGHMGFPTDMPTPVI 687
            + HRS+  R+N M    R  PR    P  P+  P F  P P+ PY G +GFP ++P  +I
Sbjct: 250  NNHRSFNGRDNFMSP--RFGPRFIRPPLPPNPAPLFPPPPPLHPYGGSIGFP-ELPPQMI 306

Query: 686  LYQPPEL--LRGVGPLMPPVAAHHMY-SPSIPDQQVYVKIMNQIEYYFSNENLVKDTFLR 516
               PP L  +RGV P + P+  + M+  PS  D Q++ KI+NQI+YYFSNENLVKD +LR
Sbjct: 307  YVPPPPLESMRGV-PFVSPIPPNAMFFQPS--DNQLHTKIVNQIDYYFSNENLVKDIYLR 363

Query: 515  RNMDEQGWVSIKLIAGFKKVQNLTESIQQILDALQASTVVEVQNDKIRKRNEWMKWILAP 336
            RNMD+QGWV+I LIAGFKKV+ LTE+IQ +LDA++ S+VVEVQ DKIR+RN+W +WI+  
Sbjct: 364  RNMDDQGWVTINLIAGFKKVKYLTENIQIVLDAVRTSSVVEVQGDKIRRRNDWRRWIMPG 423

Query: 335  GAFSPVLSPQARAKSGHDMLAGQFQGVTLD 246
            G       P  R       LA + Q +TL+
Sbjct: 424  GQV-----PNVRGSQTVGQLAERVQNITLE 448


>ref|XP_003612233.1| ATP synthase subunit a chloroplastic [Medicago truncatula]
            gi|355513568|gb|AES95191.1| ATP synthase subunit a
            chloroplastic [Medicago truncatula]
          Length = 670

 Score =  255 bits (652), Expect = 3e-65
 Identities = 177/488 (36%), Positives = 250/488 (51%), Gaps = 35/488 (7%)
 Frame = -1

Query: 1604 SINSPRRSPWTQVLVKGAESEQSVVIGARVSEQ----MTNSIDCVKDASVVSNEVDNS-- 1443
            ++ S R  PW QV V+G     + V    +SE+    +T  +D    A V+S+  DN   
Sbjct: 15   NLQSRRLPPWNQV-VRGESESIAAVPAVSLSEESFPIVTAPVDDSTSAEVISDNADNGGE 73

Query: 1442 -NAG-GVKQVWGKPLKGNGXXXXXXXXXXXXADEVSPVMDTYSWXXXXXXXXXXXXXXXX 1269
             N G G +  W +   GNG              EV PVMD +SW                
Sbjct: 74   RNGGTGKRPAWNRS-SGNGGV-----------SEVQPVMDAHSWPALSDSARGSTKSESS 121

Query: 1268 XXXXXXXXXXXXXXXXSN-KQAIANTSSPTSTPNHVTNTRQKSMRRGSNN----GGFVQP 1104
                            S    ++          N++  TRQKS++  S+N    GG  Q 
Sbjct: 122  KGLLDGSSVSPWQGMESTPSSSMQRQVGDNVNVNNMAPTRQKSIKHNSSNASSNGGHTQQ 181

Query: 1103 SSPQPRAPAV-----------ELPLGKPGNTTGDSFSNKEGGPKGGFGNDHQPQRSNSFN 957
            S+PQ    A            + P     +    + S ++   + GF     PQ+ NSF 
Sbjct: 182  SAPQVSIAATGSHTSSSRDHTQSPRDHTQSPRDHAQSPRDHTQRSGFVPSDHPQQRNSF- 240

Query: 956  RWGSGGQHQRGDGSYHHQSFGGRRDQDRGNQDWSTHRSYGSRENHMQQQQRGAPRGYPRA 777
            R  +GG HQRGDGS+HH ++G RRDQD     W++ R+Y  R+ H+       PR  PR 
Sbjct: 241  RHRNGGPHQRGDGSHHHHNYGNRRDQD-----WNSRRNYNGRDMHVP------PRVSPRI 289

Query: 776  ------PHGPPFLTPLPVGPYPGHMGFPTDMPTPVILYQPP----ELLRGVGPLMPPVAA 627
                  P+  PF+ P P+ P+ GHMGF  ++  PV+L+  P    + LRGV P +PP+  
Sbjct: 290  IRPSLPPNSAPFIHPPPLRPFGGHMGFH-ELAAPVVLFAGPPPPIDSLRGV-PFVPPMPL 347

Query: 626  HHMYSPSIPDQQVYVKIMNQIEYYFSNENLVKDTFLRRNMDEQGWVSIKLIAGFKKVQNL 447
            ++    + PD Q++ KI+NQI+YYFSNENLVKD FLR+NMD QGWV I LIAGFKKV +L
Sbjct: 348  YY----AGPDPQLHSKIVNQIDYYFSNENLVKDIFLRKNMDAQGWVPITLIAGFKKVMDL 403

Query: 446  TESIQQILDALQASTVVEVQNDKIRKRNEWMKWIL-APGAFSPVLSPQARAKSGHDMLAG 270
            T++IQ I+DA++ S+VVEVQ DKIR++N+W KWI+ +P  F  V SP+       DMLA 
Sbjct: 404  TDNIQLIIDAIRTSSVVEVQGDKIRRQNDWEKWIMPSPVQFPNVTSPEV---LNQDMLAE 460

Query: 269  QFQGVTLD 246
            + + + L+
Sbjct: 461  KMRNIALE 468


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