BLASTX nr result

ID: Bupleurum21_contig00000417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000417
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC59769.1| 3-ketoacyl-CoA thiolase 1 [Rehmannia glutinosa]        355   1e-95
gb|AGC24176.1| 3-ketoacyl-CoA thiolase 2 [Rehmannia glutinosa]        355   1e-95
pir||S72532 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor...   349   9e-94
dbj|BAJ34444.1| unnamed protein product [Thellungiella halophila]     348   1e-93
pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From A...   348   2e-93

>gb|AGC59769.1| 3-ketoacyl-CoA thiolase 1 [Rehmannia glutinosa]
          Length = 464

 Score =  355 bits (912), Expect = 1e-95
 Identities = 177/227 (77%), Positives = 193/227 (85%)
 Frame = +1

Query: 553  PGSQRAAECRMAAFYAGFPETVPIRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLES 732
            PGSQRA+ECRMAAFYAGFPETVP+RTVNRQCSSGLQ           GFYDIGIGAGLES
Sbjct: 110  PGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLES 169

Query: 733  MTANSMGWDGTVNPRVKSMADAQNCLLPMGITSENVASRYGITRLEQDQAAVDSHKKXXX 912
            MT N M W+G+VNPRVKSMA AQ+CLLPMGITSENVA R+G+TR EQDQAAVDSH+K   
Sbjct: 170  MTVNPMAWEGSVNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAA 229

Query: 913  XXXXGKFKDEIVPVHTKIVDPKTGDETPVTISADDGIRADTNVAGLAKLRPSFKKDGTTT 1092
                GKFKDEI+PV TKIVDPK+GDE PVTIS DDGIR +T+VA L KL+P FKKDG+TT
Sbjct: 230  ATASGKFKDEIIPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTT 289

Query: 1093 AGNSSQVSDAAAAVLLMKRSVAMQKGLPILGVFRTFVAVGVDPAVMG 1233
            AGNSSQVSD A AVLLMKRSVAMQKGLPILGVFR+F AVGVDPA+MG
Sbjct: 290  AGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAIMG 336



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 47/75 (62%), Positives = 52/75 (69%)
 Frame = +2

Query: 206 MEKAIERQRVLLQHLRPXXXXXXXXXXXXXXXXXXXXXGDTSAYHRTSVFGDDVVIVAAQ 385
           MEKA ERQRVLLQHLRP                     GD++AYHR+SVFGDDVVIVAA 
Sbjct: 1   MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60

Query: 386 RTAICKAKRGGFKDT 430
           RTA+CK+KRGGFKDT
Sbjct: 61  RTALCKSKRGGFKDT 75


>gb|AGC24176.1| 3-ketoacyl-CoA thiolase 2 [Rehmannia glutinosa]
          Length = 464

 Score =  355 bits (912), Expect = 1e-95
 Identities = 177/227 (77%), Positives = 193/227 (85%)
 Frame = +1

Query: 553  PGSQRAAECRMAAFYAGFPETVPIRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLES 732
            PGSQRA+ECRMAAFYAGFPETVP+RTVNRQCSSGLQ           GFYDIGIGAGLES
Sbjct: 110  PGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLES 169

Query: 733  MTANSMGWDGTVNPRVKSMADAQNCLLPMGITSENVASRYGITRLEQDQAAVDSHKKXXX 912
            MT N M W+G+VNPRVKSMA AQ+CLLPMGITSENVA R+G+TR EQDQAAVDSH+K   
Sbjct: 170  MTVNPMAWEGSVNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAA 229

Query: 913  XXXXGKFKDEIVPVHTKIVDPKTGDETPVTISADDGIRADTNVAGLAKLRPSFKKDGTTT 1092
                GKFKDEI+PV TKIVDPK+GDE PVTIS DDGIR +T+VA L KL+P FKKDG+TT
Sbjct: 230  ATASGKFKDEIIPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTT 289

Query: 1093 AGNSSQVSDAAAAVLLMKRSVAMQKGLPILGVFRTFVAVGVDPAVMG 1233
            AGNSSQVSD A AVLLMKRSVAMQKGLPILGVFR+F AVGVDPA+MG
Sbjct: 290  AGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAIMG 336



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 47/75 (62%), Positives = 52/75 (69%)
 Frame = +2

Query: 206 MEKAIERQRVLLQHLRPXXXXXXXXXXXXXXXXXXXXXGDTSAYHRTSVFGDDVVIVAAQ 385
           MEKA ERQRVLLQHLRP                     GD++AYHR+SVFGDDVVIVAA 
Sbjct: 1   MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60

Query: 386 RTAICKAKRGGFKDT 430
           RTA+CK+KRGGFKDT
Sbjct: 61  RTALCKSKRGGFKDT 75


>pir||S72532 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit
            gi|1694621|dbj|BAA11117.1| 3-ketoacyl-CoA thiolase
            [Cucurbita cv. Kurokawa Amakuri]
          Length = 461

 Score =  349 bits (895), Expect = 9e-94
 Identities = 172/227 (75%), Positives = 189/227 (83%)
 Frame = +1

Query: 553  PGSQRAAECRMAAFYAGFPETVPIRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLES 732
            PGSQRA+ECRMA FY GFPETVP+RTVNRQCSSGLQ           GFYDIGIGAGLES
Sbjct: 107  PGSQRASECRMATFYPGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLES 166

Query: 733  MTANSMGWDGTVNPRVKSMADAQNCLLPMGITSENVASRYGITRLEQDQAAVDSHKKXXX 912
            MT N M WDG+VNPRVKSM +AQNCLLPMG+TSENVA R+G++R EQD+AAV+SH+K   
Sbjct: 167  MTVNPMAWDGSVNPRVKSMENAQNCLLPMGVTSENVAQRFGVSREEQDKAAVESHRKAAA 226

Query: 913  XXXXGKFKDEIVPVHTKIVDPKTGDETPVTISADDGIRADTNVAGLAKLRPSFKKDGTTT 1092
                GKFKDEI+PV TKI+DPKTG+E PVTIS DDGIR +T  A L KL+P FKKDGTTT
Sbjct: 227  ATASGKFKDEIIPVSTKIIDPKTGEERPVTISVDDGIRPNTTQADLGKLKPVFKKDGTTT 286

Query: 1093 AGNSSQVSDAAAAVLLMKRSVAMQKGLPILGVFRTFVAVGVDPAVMG 1233
            AGNSSQVSD A AVLLMKRSVAMQKGLPILGVFRTF AVGVDPA+MG
Sbjct: 287  AGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRTFTAVGVDPAIMG 333



 Score = 80.5 bits (197), Expect = 8e-13
 Identities = 43/75 (57%), Positives = 49/75 (65%)
 Frame = +2

Query: 206 MEKAIERQRVLLQHLRPXXXXXXXXXXXXXXXXXXXXXGDTSAYHRTSVFGDDVVIVAAQ 385
           MEKAI RQ +LL HLRP                     GD+++Y RTSVFGDDVVIVAA 
Sbjct: 1   MEKAINRQSILLHHLRPSSSAYSHESSLSASVCAA---GDSASYQRTSVFGDDVVIVAAY 57

Query: 386 RTAICKAKRGGFKDT 430
           RTA+CK+KRGGFKDT
Sbjct: 58  RTALCKSKRGGFKDT 72


>dbj|BAJ34444.1| unnamed protein product [Thellungiella halophila]
          Length = 462

 Score =  348 bits (894), Expect = 1e-93
 Identities = 170/227 (74%), Positives = 188/227 (82%)
 Frame = +1

Query: 553  PGSQRAAECRMAAFYAGFPETVPIRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLES 732
            PGSQRA+ECRM+AFYAGFPETV +RTVNRQCSSGLQ           GFYDIGIGAGLES
Sbjct: 108  PGSQRASECRMSAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLES 167

Query: 733  MTANSMGWDGTVNPRVKSMADAQNCLLPMGITSENVASRYGITRLEQDQAAVDSHKKXXX 912
            MT N M W+G+VNP VK  A AQNCLLPMG+TSENVA R+G++R EQDQAAVDSH+K   
Sbjct: 168  MTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAA 227

Query: 913  XXXXGKFKDEIVPVHTKIVDPKTGDETPVTISADDGIRADTNVAGLAKLRPSFKKDGTTT 1092
                GKFKDEI+PV TK+VDPKTGDETP+T+S DDGIR  T +A L KL+P FKKDGTTT
Sbjct: 228  ATAAGKFKDEIIPVKTKLVDPKTGDETPITVSVDDGIRPSTTLATLGKLKPVFKKDGTTT 287

Query: 1093 AGNSSQVSDAAAAVLLMKRSVAMQKGLPILGVFRTFVAVGVDPAVMG 1233
            AGNSSQVSD A AVLLMKRSVAMQKGLP+LGVFRTF AVGVDPA+MG
Sbjct: 288  AGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMG 334



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 44/75 (58%), Positives = 51/75 (68%)
 Frame = +2

Query: 206 MEKAIERQRVLLQHLRPXXXXXXXXXXXXXXXXXXXXXGDTSAYHRTSVFGDDVVIVAAQ 385
           MEKAIERQRVLL+HLRP                     GD++AY RTS++GDDVVIVAA 
Sbjct: 1   MEKAIERQRVLLEHLRPSSSSSHSFEGSLSASACLA--GDSAAYQRTSLYGDDVVIVAAH 58

Query: 386 RTAICKAKRGGFKDT 430
           RTA+CK+KRG FKDT
Sbjct: 59  RTALCKSKRGNFKDT 73


>pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis
            Thaliana gi|295982058|pdb|2WU9|B Chain B, Crystal
            Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana
          Length = 442

 Score =  348 bits (892), Expect = 2e-93
 Identities = 170/227 (74%), Positives = 187/227 (82%)
 Frame = +1

Query: 553  PGSQRAAECRMAAFYAGFPETVPIRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLES 732
            PGSQRA+ECRMAAFYAGFPETV +RTVNRQCSSGLQ           GFYDIGIGAGLES
Sbjct: 88   PGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLES 147

Query: 733  MTANSMGWDGTVNPRVKSMADAQNCLLPMGITSENVASRYGITRLEQDQAAVDSHKKXXX 912
            MT N M W+G+VNP VK  A AQNCLLPMG+TSENVA R+G++R EQDQAAVDSH+K   
Sbjct: 148  MTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAA 207

Query: 913  XXXXGKFKDEIVPVHTKIVDPKTGDETPVTISADDGIRADTNVAGLAKLRPSFKKDGTTT 1092
                GKFKDEI+PV TK+VDPKTGDE P+T+S DDGIR  T +A L KL+P FKKDGTTT
Sbjct: 208  ATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTT 267

Query: 1093 AGNSSQVSDAAAAVLLMKRSVAMQKGLPILGVFRTFVAVGVDPAVMG 1233
            AGNSSQVSD A AVLLMKRSVAMQKGLP+LGVFRTF AVGVDPA+MG
Sbjct: 268  AGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMG 314



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = +2

Query: 320 GDTSAYHRTSVFGDDVVIVAAQRTAICKAKRGGFKDT 430
           GD++AY RTS++GDDVVIVAA RT +CK+KRG FKDT
Sbjct: 17  GDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDT 53


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