BLASTX nr result

ID: Bupleurum21_contig00000414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000414
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251...   237   5e-60
emb|CBI25319.3| unnamed protein product [Vitis vinifera]              237   5e-60
ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing fac...   228   2e-57
ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258...   227   5e-57
ref|NP_001168362.1| uncharacterized protein LOC100382130 [Zea ma...   227   5e-57

>ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
          Length = 304

 Score =  237 bits (604), Expect = 5e-60
 Identities = 103/115 (89%), Positives = 110/115 (95%)
 Frame = +1

Query: 229 NRFRRVRDVDMKHDYAFVEFSDPRDADDARYSLNGRDIDGSRLIVEIAKGVPRGPGGSRE 408
           +R+ RVRDVDMKHD+AFVEFSDPRDADDARYSLNGRD DGSR+IVE AKG PRGPGGSRE
Sbjct: 32  SRYGRVRDVDMKHDFAFVEFSDPRDADDARYSLNGRDFDGSRIIVEFAKGGPRGPGGSRE 91

Query: 409 YMGRGPPPGSGRCFNCGLDGHWARDCKSGDWKNKCYRCGERGHIERNCTNSPKKL 573
           Y+GRGPPPGSGRCFNCG+DGHWARDCK+GDWKNKCYRCGERGHIERNC NSPKKL
Sbjct: 92  YLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL 146


>emb|CBI25319.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score =  237 bits (604), Expect = 5e-60
 Identities = 103/115 (89%), Positives = 110/115 (95%)
 Frame = +1

Query: 229 NRFRRVRDVDMKHDYAFVEFSDPRDADDARYSLNGRDIDGSRLIVEIAKGVPRGPGGSRE 408
           +R+ RVRDVDMKHD+AFVEFSDPRDADDARYSLNGRD DGSR+IVE AKG PRGPGGSRE
Sbjct: 64  SRYGRVRDVDMKHDFAFVEFSDPRDADDARYSLNGRDFDGSRIIVEFAKGGPRGPGGSRE 123

Query: 409 YMGRGPPPGSGRCFNCGLDGHWARDCKSGDWKNKCYRCGERGHIERNCTNSPKKL 573
           Y+GRGPPPGSGRCFNCG+DGHWARDCK+GDWKNKCYRCGERGHIERNC NSPKKL
Sbjct: 124 YLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL 178


>ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
           1 [Cucumis sativus] gi|449451691|ref|XP_004143595.1|
           PREDICTED: serine/arginine-rich splicing factor
           RS2Z32-like isoform 2 [Cucumis sativus]
           gi|449507559|ref|XP_004163066.1| PREDICTED:
           serine/arginine-rich splicing factor RS2Z32-like isoform
           1 [Cucumis sativus] gi|449507562|ref|XP_004163067.1|
           PREDICTED: serine/arginine-rich splicing factor
           RS2Z32-like isoform 2 [Cucumis sativus]
          Length = 309

 Score =  228 bits (582), Expect = 2e-57
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = +1

Query: 229 NRFRRVRDVDMKHDYAFVEFSDPRDADDARYSLNGRDIDGSRLIVEIAKGVPRGPGGSRE 408
           +R+ RVRDVDMK DYAFVEFSDPRDADDARYSLNGRD+ GSR+IVEIAKGVPRGPGGSRE
Sbjct: 32  SRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE 91

Query: 409 YMGRGPPPGSGRCFNCGLDGHWARDCKSGDWKNKCYRCGERGHIERNCTNSPKKL 573
           Y+GRG PPG+GRCFNCG+DGHWARDCK+GDWKNKCYRCGERGHIE+NC NSPKKL
Sbjct: 92  YLGRG-PPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKL 145


>ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
          Length = 307

 Score =  227 bits (578), Expect = 5e-57
 Identities = 100/116 (86%), Positives = 109/116 (93%), Gaps = 1/116 (0%)
 Frame = +1

Query: 229 NRFRRVRDVDMKHDYAFVEFSDPRDADDARYSLNGRDIDGSRLIVEIAKGVPRG-PGGSR 405
           +R+ RVRDVDMKHD+AFVEFSDPRDADDARY+LNGRD DGSR+IVE AKG PRG  GGSR
Sbjct: 32  SRYGRVRDVDMKHDFAFVEFSDPRDADDARYNLNGRDFDGSRIIVEFAKGGPRGGSGGSR 91

Query: 406 EYMGRGPPPGSGRCFNCGLDGHWARDCKSGDWKNKCYRCGERGHIERNCTNSPKKL 573
           EY+GRGPPPGSGRCFNCG+DGHWARDCK+GDWKNKCYRCGERGHIERNC NSP+KL
Sbjct: 92  EYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRKL 147


>ref|NP_001168362.1| uncharacterized protein LOC100382130 [Zea mays]
           gi|223945609|gb|ACN26888.1| unknown [Zea mays]
           gi|223947765|gb|ACN27966.1| unknown [Zea mays]
           gi|413950152|gb|AFW82801.1| hypothetical protein
           ZEAMMB73_678679 [Zea mays]
          Length = 315

 Score =  227 bits (578), Expect = 5e-57
 Identities = 95/128 (74%), Positives = 114/128 (89%)
 Frame = +1

Query: 190 FQNLSNDGLTISGNRFRRVRDVDMKHDYAFVEFSDPRDADDARYSLNGRDIDGSRLIVEI 369
           F+   +  L + GN FRR+R+V++K DYAF+EFSDPRDADDA+Y+L+GRD+DGSR+IVE 
Sbjct: 9   FEYFDSRQLIVCGNHFRRIREVELKRDYAFIEFSDPRDADDAQYNLDGRDVDGSRIIVEF 68

Query: 370 AKGVPRGPGGSREYMGRGPPPGSGRCFNCGLDGHWARDCKSGDWKNKCYRCGERGHIERN 549
           AKGVPRG GGSR+Y GRGPPPG+GRCFNCG+DGHWARDC++GDWKNKCYRCGERGHIERN
Sbjct: 69  AKGVPRGSGGSRDYNGRGPPPGTGRCFNCGVDGHWARDCQAGDWKNKCYRCGERGHIERN 128

Query: 550 CTNSPKKL 573
           C NSP+ L
Sbjct: 129 CQNSPRNL 136


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