BLASTX nr result

ID: Bupleurum21_contig00000406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000406
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272917.1| PREDICTED: UPF0051 protein ABCI8, chloroplas...   409   e-112
emb|CAN76788.1| hypothetical protein VITISV_038836 [Vitis vinifera]   407   e-111
emb|CBI23255.3| unnamed protein product [Vitis vinifera]              387   e-105
gb|AAX36074.1| non-intrinsic ABC protein [Nicotiana benthamiana]      386   e-105
ref|XP_004153240.1| PREDICTED: UPF0051 protein ABCI8, chloroplas...   370   e-100

>ref|XP_002272917.1| PREDICTED: UPF0051 protein ABCI8, chloroplastic [Vitis vinifera]
          Length = 554

 Score =  409 bits (1052), Expect = e-112
 Identities = 205/277 (74%), Positives = 234/277 (84%), Gaps = 7/277 (2%)
 Frame = +2

Query: 134 MASLLANGISHFSHTETPTFTKGFVPNLVTLKS---SKPRNQNSRIFKVRADVDFKPQTI 304
           MASLLANG+  FS +ETP F KGF P L +LKS     P+N  S +FKVRADV F+ +TI
Sbjct: 1   MASLLANGLPRFSPSETPKFPKGFCPKLESLKSLNPKTPKNPTSSVFKVRADVGFESKTI 60

Query: 305 ESD---ALQGKLLSDETD-QLHKFLKRDYKWGFNQEIDSFSIPKGLSEETIRLISSRKNE 472
           +SD   A  GK  +  TD +L K L RDYKWG+ + IDS +IPKGLSE+TIR+IS RKNE
Sbjct: 61  DSDSPTASPGKHATSSTDDKLQKILNRDYKWGWFENIDSDAIPKGLSEKTIRMISERKNE 120

Query: 473 PDWMLEFRLNSYKKFCKMTEPKWSDNTYPAINFQDLCYYSEPKKKPTLNSLDEADPELVK 652
           PDWMLEFRL SY+KF KM EPKWSDN YP I+FQD+CYYSEPKKKP+LNSLDEADPEL++
Sbjct: 121 PDWMLEFRLKSYEKFLKMKEPKWSDNRYPPIDFQDMCYYSEPKKKPSLNSLDEADPELLR 180

Query: 653 YFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIKEYPDLVKK 832
           YFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAI+EYPDLV+K
Sbjct: 181 YFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIREYPDLVRK 240

Query: 833 YLGKVVPPEDNFYAALNAAVFSDGSFVYIPKDTRSPM 943
           YLG+VVP +DN+YAALN+AVFSDGSF Y+PKDT+ PM
Sbjct: 241 YLGRVVPSDDNYYAALNSAVFSDGSFCYVPKDTKCPM 277


>emb|CAN76788.1| hypothetical protein VITISV_038836 [Vitis vinifera]
          Length = 554

 Score =  407 bits (1047), Expect = e-111
 Identities = 204/277 (73%), Positives = 233/277 (84%), Gaps = 7/277 (2%)
 Frame = +2

Query: 134 MASLLANGISHFSHTETPTFTKGFVPNLVTLKS---SKPRNQNSRIFKVRADVDFKPQTI 304
           MASLLANG+  FS +ETP F KGF P L +LKS     P+N  S +FKVRADV F+ +TI
Sbjct: 1   MASLLANGLPRFSPSETPKFPKGFCPKLESLKSLNPKTPKNPTSSVFKVRADVGFESKTI 60

Query: 305 ESD---ALQGKLLSDETD-QLHKFLKRDYKWGFNQEIDSFSIPKGLSEETIRLISSRKNE 472
           +SD   A  GK  +  TD +L K L RDYKWG+ + IDS +IPKGLSE+TIR+IS RKNE
Sbjct: 61  DSDSPTASPGKXATSSTDDKLQKILNRDYKWGWFENIDSDAIPKGLSEKTIRMISERKNE 120

Query: 473 PDWMLEFRLNSYKKFCKMTEPKWSDNTYPAINFQDLCYYSEPKKKPTLNSLDEADPELVK 652
           P WMLEFRL SY+KF KM EPKWSDN YP I+FQD+CYYSEPKKKP+LNSLDEADPEL++
Sbjct: 121 PXWMLEFRLKSYEKFLKMKEPKWSDNRYPPIDFQDMCYYSEPKKKPSLNSLDEADPELLR 180

Query: 653 YFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIKEYPDLVKK 832
           YFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAI+EYPDLV+K
Sbjct: 181 YFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIREYPDLVRK 240

Query: 833 YLGKVVPPEDNFYAALNAAVFSDGSFVYIPKDTRSPM 943
           YLG+VVP +DN+YAALN+AVFSDGSF Y+PKDT+ PM
Sbjct: 241 YLGRVVPSDDNYYAALNSAVFSDGSFCYVPKDTKCPM 277


>emb|CBI23255.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  387 bits (995), Expect = e-105
 Identities = 194/270 (71%), Positives = 219/270 (81%), Gaps = 3/270 (1%)
 Frame = +2

Query: 134 MASLLANGISHFSHTETPTFTKGFVPNLVTLKS---SKPRNQNSRIFKVRADVDFKPQTI 304
           MASLLANG+  FS +ETP F KGF P L +LKS     P+N  S +FKVRAD        
Sbjct: 1   MASLLANGLPRFSPSETPKFPKGFCPKLESLKSLNPKTPKNPTSSVFKVRAD-------- 52

Query: 305 ESDALQGKLLSDETDQLHKFLKRDYKWGFNQEIDSFSIPKGLSEETIRLISSRKNEPDWM 484
                     S   D+L K L RDYKWG+ + IDS +IPKGLSE+TIR+IS RKNEPDWM
Sbjct: 53  -------HATSSTDDKLQKILNRDYKWGWFENIDSDAIPKGLSEKTIRMISERKNEPDWM 105

Query: 485 LEFRLNSYKKFCKMTEPKWSDNTYPAINFQDLCYYSEPKKKPTLNSLDEADPELVKYFDK 664
           LEFRL SY+KF KM EPKWSDN YP I+FQD+CYYSEPKKKP+LNSLDEADPEL++YFDK
Sbjct: 106 LEFRLKSYEKFLKMKEPKWSDNRYPPIDFQDMCYYSEPKKKPSLNSLDEADPELLRYFDK 165

Query: 665 LGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIKEYPDLVKKYLGK 844
           LGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAI+EYPDLV+KYLG+
Sbjct: 166 LGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIREYPDLVRKYLGR 225

Query: 845 VVPPEDNFYAALNAAVFSDGSFVYIPKDTR 934
           VVP +DN+YAALN+AVFSDGSF Y+PKDT+
Sbjct: 226 VVPSDDNYYAALNSAVFSDGSFCYVPKDTK 255


>gb|AAX36074.1| non-intrinsic ABC protein [Nicotiana benthamiana]
          Length = 546

 Score =  386 bits (992), Expect = e-105
 Identities = 196/273 (71%), Positives = 224/273 (82%), Gaps = 3/273 (1%)
 Frame = +2

Query: 134 MASLLANGISHFSH---TETPTFTKGFVPNLVTLKSSKPRNQNSRIFKVRADVDFKPQTI 304
           MASL+ NGIS FS    TE P   KG        KS+  R  NSR  KV+A  +    T+
Sbjct: 1   MASLVTNGISCFSPQQITEQPKLPKGCQ---FLQKSATSRYPNSRNLKVKA-AELTSSTL 56

Query: 305 ESDALQGKLLSDETDQLHKFLKRDYKWGFNQEIDSFSIPKGLSEETIRLISSRKNEPDWM 484
           E+        ++E DQL KFLKRDYKWGFN++I+SF++PKGLSEET++LIS++K+EP WM
Sbjct: 57  ETPGKDSSFSTNENDQLQKFLKRDYKWGFNEKIESFALPKGLSEETVKLISAKKSEPSWM 116

Query: 485 LEFRLNSYKKFCKMTEPKWSDNTYPAINFQDLCYYSEPKKKPTLNSLDEADPELVKYFDK 664
           LEFRL SY+KF KM EP WSDN YP I+FQD+ YYSEPKKKPTLNSLDEADPEL+KYFDK
Sbjct: 117 LEFRLKSYEKFIKMKEPNWSDNRYPDIDFQDIVYYSEPKKKPTLNSLDEADPELIKYFDK 176

Query: 665 LGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIKEYPDLVKKYLGK 844
           LGVPLNE+NRLANVAVDAVLDSVSIATTHRKTLEK+GVIFCSISEAI+EYPDLVKKYLG+
Sbjct: 177 LGVPLNERNRLANVAVDAVLDSVSIATTHRKTLEKSGVIFCSISEAIREYPDLVKKYLGR 236

Query: 845 VVPPEDNFYAALNAAVFSDGSFVYIPKDTRSPM 943
           VVPPEDNFYAALN+AVFSDGSFVYIPK+TR PM
Sbjct: 237 VVPPEDNFYAALNSAVFSDGSFVYIPKNTRCPM 269


>ref|XP_004153240.1| PREDICTED: UPF0051 protein ABCI8, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 482

 Score =  370 bits (951), Expect = e-100
 Identities = 193/277 (69%), Positives = 222/277 (80%), Gaps = 7/277 (2%)
 Frame = +2

Query: 134 MASLLANGISHFSHTETPTFTKGFVPNLVTLKSSKPRNQNSRIFKVRADVDFKPQTIESD 313
           MASLLANGIS F H  T    K  +P L + + +  +   S+ F+VRADV + P+T  S 
Sbjct: 1   MASLLANGISRFPHNPTWELHKDAIPKLHSPRIANLKISKSKPFRVRADVGYDPKTANSG 60

Query: 314 AL-QGKLLSDET---DQLHKFLK-RDY--KWGFNQEIDSFSIPKGLSEETIRLISSRKNE 472
            + QGK     T   +++   L+ RDY  K+GF  +IDSFSIPKGLS+ETIRLISS K E
Sbjct: 61  PISQGKSSPSSTTTDEKIQDILRNRDYDRKFGFTVDIDSFSIPKGLSKETIRLISSLKEE 120

Query: 473 PDWMLEFRLNSYKKFCKMTEPKWSDNTYPAINFQDLCYYSEPKKKPTLNSLDEADPELVK 652
           PDWMLEFRLN+++KF KM EP WSDN YP I+FQD+CYYS PKKKPTLNSLDEADPEL+ 
Sbjct: 121 PDWMLEFRLNAFEKFLKMKEPTWSDNRYPPIDFQDVCYYSAPKKKPTLNSLDEADPELLM 180

Query: 653 YFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIKEYPDLVKK 832
           YFD+LGVPLNE+NRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIKEYPDLV+K
Sbjct: 181 YFDRLGVPLNERNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIKEYPDLVRK 240

Query: 833 YLGKVVPPEDNFYAALNAAVFSDGSFVYIPKDTRSPM 943
           YLG+VVP EDNFYAALN+AVFSDGSF YIPKDT+ PM
Sbjct: 241 YLGRVVPSEDNFYAALNSAVFSDGSFCYIPKDTKCPM 277


Top