BLASTX nr result
ID: Bupleurum21_contig00000387
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000387
(1778 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like... 488 e-135
ref|XP_002511787.1| DNA binding protein, putative [Ricinus commu... 474 e-131
gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago trun... 473 e-131
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago... 473 e-131
ref|XP_003534589.1| PREDICTED: flap endonuclease GEN-like 1-like... 462 e-127
>ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
gi|449472478|ref|XP_004153607.1| PREDICTED: flap
endonuclease GEN-like 1-like [Cucumis sativus]
gi|449516535|ref|XP_004165302.1| PREDICTED: flap
endonuclease GEN-like 1-like [Cucumis sativus]
Length = 606
Score = 488 bits (1257), Expect = e-135
Identities = 260/498 (52%), Positives = 322/498 (64%), Gaps = 3/498 (0%)
Frame = -1
Query: 1778 RECVELLKLLGMPVLRAKGEAEALCAQLNKEGHVDACITADSDVFLFGANCVIKSIRPNS 1599
+ECVELL+L G+PVL AKGEAEALCA+LN++G VDACITADSD FLFGA CVIKS PNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNQKGFVDACITADSDAFLFGAKCVIKSFNPNS 180
Query: 1598 KEPFECYYMPDIEAGLGLKREHLIAISLLVGNDYDSIGVPGIGLETALKFVKYFSEDEIL 1419
KEP ECY+M DIEA LG R HLIAISLLVGND+D GV G+GL+TA+ FV+ +++DEIL
Sbjct: 181 KEPLECYFMSDIEAALGFNRNHLIAISLLVGNDHDLNGVQGVGLDTAVCFVQDYTDDEIL 240
Query: 1418 NRLYEAGRGDKLQFPADICSVGGSVSCSYENLPEAKCRHCSLCGHPGSKKEHLKFPCEYC 1239
N+LYE G D + + V S N + KC HCS CGHPGSK+ H+KFPCEYC
Sbjct: 241 NKLYEIGNEDTTPLQSGLELVNNYGQSSETNSRKIKCSHCSFCGHPGSKRAHIKFPCEYC 300
Query: 1238 KSNAVEGCSKKPVAFKCNCSSCNMDRXXXXXXXXXXXXXKICNKISLEQNFPNKDIIAIY 1059
+ EGC KKP FKCNCSSCNMDR ++ NKI++E NFP+ ++I +Y
Sbjct: 301 DVSHGEGCIKKPDGFKCNCSSCNMDREEKEKKKQENWRLRVRNKIAMEPNFPSSELIQMY 360
Query: 1058 LKNDQESFIDADHKLTWESPNVEMLADFLNYYQKWEPSYTRQRILPMLSTIFLRKMASNL 879
++ F D D L+W SP EML DFL ++ +WEPSY RQR+LPMLSTIFLR+MA+N
Sbjct: 361 QCDNHSYFSDDDLVLSWGSPRTEMLVDFLVFHLQWEPSYIRQRMLPMLSTIFLREMANNP 420
Query: 878 TDDLLHEQYVFDSIHRVRIKFGHQLYVVKWKIATPAVGDTTSTIISKETVSSEPEESI-- 705
T LL+ QY FDSI R +I++GH YVVKWK A PA+ T S + P+++I
Sbjct: 421 TQTLLYGQYEFDSILREKIRYGHSFYVVKWKKAVPAISSTYED--SSGEFGTGPDDAIDV 478
Query: 704 -KYIDLLDESDIPETHFSSNDGCSYLLTDENMELVRAAFPEKVDQFLKEKELKETKSRRK 528
+ ++L DESD P+ H DGCS+LLTDENMELV AA+PE+ +FL+EKE+K R+K
Sbjct: 479 DEAVNLTDESDSPKIHI--QDGCSFLLTDENMELVAAAYPEQAAKFLQEKEMK----RQK 532
Query: 527 GTGLRCQGTPEQSAGTSTKSVQLSIKEFYRXXXXXXXXXXXXXXXKFTENIDXXXXXXXX 348
T +S + K VQLSI EFYR T +
Sbjct: 533 TPSTPACETSGKSDSSKAKGVQLSITEFYR----ATKTQQTADTTDLTNEDEETSTGKRK 588
Query: 347 XXXXXNLSKSARRRLLFD 294
LSKS RRRLLFD
Sbjct: 589 ASSSSTLSKSVRRRLLFD 606
>ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
gi|223548967|gb|EEF50456.1| DNA binding protein, putative
[Ricinus communis]
Length = 609
Score = 474 bits (1220), Expect = e-131
Identities = 256/498 (51%), Positives = 325/498 (65%), Gaps = 4/498 (0%)
Frame = -1
Query: 1778 RECVELLKLLGMPVLRAKGEAEALCAQLNKEGHVDACITADSDVFLFGANCVIKSIRPNS 1599
+ECVELL+L GMPVL+A GEAEALCAQLN +G VDACITADSD FLFGA CVIKSI+PNS
Sbjct: 121 KECVELLELFGMPVLKANGEAEALCAQLNSQGLVDACITADSDAFLFGAKCVIKSIKPNS 180
Query: 1598 KEPFECYYMPDIEAGLGLKREHLIAISLLVGNDYDSIGVPGIGLETALKFVKYFSEDEIL 1419
KEPFECY M DIE+GL LKR+HLIAI+LLVGND+D GV GIG++TAL+FV+ F EDEIL
Sbjct: 181 KEPFECYQMSDIESGLALKRKHLIAIALLVGNDHDLNGVQGIGVDTALRFVQTFHEDEIL 240
Query: 1418 NRLYEAGRGDKLQFPADICSVGGSVSCSYENLPEAKCRHCSLCGHPGSKKEHLKFPCEYC 1239
N L E G+G+ F V + +EN ++K HCS CGHPGSK+ H K CEYC
Sbjct: 241 NCLREIGKGNTNIFLGVSRVVEDLMIDPHENSLKSKISHCSFCGHPGSKRAHFKSSCEYC 300
Query: 1238 KSNAVEGCSKKPVAFKCNCSSCNMDRXXXXXXXXXXXXXKICNKISLEQNFPNKDIIAIY 1059
++ EGC+KK AF+CNC SCN DR K+C+K+ +E NFPN DII +Y
Sbjct: 301 GNSNGEGCTKKSGAFRCNCGSCNKDRKAKEEQKRENWQIKVCDKMFMEPNFPNDDIIEMY 360
Query: 1058 LKNDQESFI-DADHKLTWESPNVEMLADFLNYYQKWEPSYTRQRILPMLSTIFLRKMASN 882
L N+ F D D L+W SPN +ML DFL +++ W PSY RQRILP+LSTI+LR MA+
Sbjct: 361 LCNNHAEFTEDDDTCLSWGSPNTDMLVDFLAFHKLWHPSYIRQRILPVLSTIYLRDMAAK 420
Query: 881 LTDDLLHEQYVFDSIHRVRIKFGHQLYVVKWKIATPAVGDTTSTIISKETVSSEPEESIK 702
LL+ QY FDSI R+++++GH+ YV+KWK A + I +E + E+ +K
Sbjct: 421 PEKALLYGQYEFDSIQRIKVRYGHESYVIKWKKAANTISSNICINIVEE-LDKHQEDIVK 479
Query: 701 ---YIDLLDESDIPETHFSSNDGCSYLLTDENMELVRAAFPEKVDQFLKEKELKETKSRR 531
ID L+E ++P+++ +DGC +LLTDENM+LV+ AFP+ VD+FLKEKE KE+K
Sbjct: 480 TDESIDQLEEYNVPKSYV--DDGCWFLLTDENMDLVQNAFPDAVDKFLKEKEQKESKR-- 535
Query: 530 KGTGLRCQGTPEQSAGTSTKSVQLSIKEFYRXXXXXXXXXXXXXXXKFTENIDXXXXXXX 351
R + E+S +K VQL+I EFYR +EN D
Sbjct: 536 -----RLSSSTEKSESVKSKGVQLNITEFYRSTKVQFAASGGEEQADCSENQDDVISTEK 590
Query: 350 XXXXXXNLSKSARRRLLF 297
NL KS RRRLLF
Sbjct: 591 RKISSSNLPKSVRRRLLF 608
>gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago truncatula]
Length = 547
Score = 473 bits (1218), Expect = e-131
Identities = 251/505 (49%), Positives = 331/505 (65%), Gaps = 10/505 (1%)
Frame = -1
Query: 1778 RECVELLKLLGMPVLRAKGEAEALCAQLNKEGHVDACITADSDVFLFGANCVIKSIRPNS 1599
+ECVEL KLLG+PVL+AKGEAEALCAQLN EGHVDACIT DSD FLFGA C+IKS PNS
Sbjct: 56 QECVELAKLLGIPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGAKCIIKSFSPNS 115
Query: 1598 KEPFECYYMPDIEAGLGLKREHLIAISLLVGNDYDSIGVPGIGLETALKFVKYFSEDEIL 1419
KEPFECY M DIEAGLGLKR+HLIAISLLVGND+D GV GIG+++AL+FV+ F ED+IL
Sbjct: 116 KEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFVQAFGEDDIL 175
Query: 1418 NRLYEAGRGDKLQFPADI-----CSVGGSVSCSYENLPEAKCRHCSLCGHPGSKKEHLKF 1254
NRL+E G+G+ Q P DI + G N P K HCS CGHPG+K++H+KF
Sbjct: 176 NRLHEIGKGNAFQVPIDIKAEENMDIDG-------NSPNTKQTHCSFCGHPGNKRDHMKF 228
Query: 1253 PCEYCKSNAVEGCSKKPVAFKCNCSSCNMDRXXXXXXXXXXXXXKICNKISLEQNFPNKD 1074
CE+C ++ EGC KKP FKC+C+SC M+R KIC+KI+ E NFP +
Sbjct: 229 SCEFCVADDNEGCLKKPEGFKCDCNSCCMNRKHKEQKKMENWHTKICDKIAKEPNFPKDE 288
Query: 1073 IIAIYLKNDQESFIDAD-HKLTWESPNVEMLADFLNYYQKWEPSYTRQRILPMLSTIFLR 897
II +YL ND F D +++WE PN+++L DFLN++Q W+PSY R+ + PM+STIFLR
Sbjct: 289 IIDMYLCNDNGYFSANDGPQISWERPNMDLLVDFLNFHQNWDPSYIRRIMFPMMSTIFLR 348
Query: 896 KMASNLTDDLLHEQYVFDSIHRVRIKFGHQLYVVKWKIATPAVGDTT---STIISKETVS 726
+MA+ TD LL Q+ F S+ RV+ ++G+Q YVVKWK A + T + + ++ +
Sbjct: 349 EMATTPTDSLLFGQFEFASLKRVKTRYGYQFYVVKWKRAMGNIASKTPANKSGMQEDVIE 408
Query: 725 SEPEESIKYIDLLDESDIPETHFSSNDGCSYLLTDENMELVRAAFPEKVDQFLKEKELKE 546
+ +E+ +DLLD+ D P+ DGCS+LLTDENM+LV AA+PE+V +F +E+ELK+
Sbjct: 409 LDVDET---VDLLDDCDFPQ--ICEEDGCSFLLTDENMDLVGAAYPEEVKRFRQEQELKD 463
Query: 545 TKSRRKGTGLRCQGTPEQSAGTSTKSVQLSIKEFY-RXXXXXXXXXXXXXXXKFTENIDX 369
K ++ T + Q + S ++K VQL+I EF+ +N D
Sbjct: 464 VKRKKNPTSI-SQENEKSSTSPNSKGVQLNITEFFPTTKSKHNPKHGEESSSNKNDNQDS 522
Query: 368 XXXXXXXXXXXXNLSKSARRRLLFD 294
N+ KS RRRLLFD
Sbjct: 523 GGSKPKRKSSSPNIPKSVRRRLLFD 547
>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
class 2 [Medicago truncatula] gi|355498862|gb|AES80065.1|
Flap endonuclease GEN-like protein [Medicago truncatula]
Length = 612
Score = 473 bits (1218), Expect = e-131
Identities = 251/505 (49%), Positives = 331/505 (65%), Gaps = 10/505 (1%)
Frame = -1
Query: 1778 RECVELLKLLGMPVLRAKGEAEALCAQLNKEGHVDACITADSDVFLFGANCVIKSIRPNS 1599
+ECVEL KLLG+PVL+AKGEAEALCAQLN EGHVDACIT DSD FLFGA C+IKS PNS
Sbjct: 121 QECVELAKLLGIPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGAKCIIKSFSPNS 180
Query: 1598 KEPFECYYMPDIEAGLGLKREHLIAISLLVGNDYDSIGVPGIGLETALKFVKYFSEDEIL 1419
KEPFECY M DIEAGLGLKR+HLIAISLLVGND+D GV GIG+++AL+FV+ F ED+IL
Sbjct: 181 KEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFVQAFGEDDIL 240
Query: 1418 NRLYEAGRGDKLQFPADI-----CSVGGSVSCSYENLPEAKCRHCSLCGHPGSKKEHLKF 1254
NRL+E G+G+ Q P DI + G N P K HCS CGHPG+K++H+KF
Sbjct: 241 NRLHEIGKGNAFQVPIDIKAEENMDIDG-------NSPNTKQTHCSFCGHPGNKRDHMKF 293
Query: 1253 PCEYCKSNAVEGCSKKPVAFKCNCSSCNMDRXXXXXXXXXXXXXKICNKISLEQNFPNKD 1074
CE+C ++ EGC KKP FKC+C+SC M+R KIC+KI+ E NFP +
Sbjct: 294 SCEFCVADDNEGCLKKPEGFKCDCNSCCMNRKHKEQKKMENWHTKICDKIAKEPNFPKDE 353
Query: 1073 IIAIYLKNDQESFIDAD-HKLTWESPNVEMLADFLNYYQKWEPSYTRQRILPMLSTIFLR 897
II +YL ND F D +++WE PN+++L DFLN++Q W+PSY R+ + PM+STIFLR
Sbjct: 354 IIDMYLCNDNGYFSANDGPQISWERPNMDLLVDFLNFHQNWDPSYIRRIMFPMMSTIFLR 413
Query: 896 KMASNLTDDLLHEQYVFDSIHRVRIKFGHQLYVVKWKIATPAVGDTT---STIISKETVS 726
+MA+ TD LL Q+ F S+ RV+ ++G+Q YVVKWK A + T + + ++ +
Sbjct: 414 EMATTPTDSLLFGQFEFASLKRVKTRYGYQFYVVKWKRAMGNIASKTPANKSGMQEDVIE 473
Query: 725 SEPEESIKYIDLLDESDIPETHFSSNDGCSYLLTDENMELVRAAFPEKVDQFLKEKELKE 546
+ +E+ +DLLD+ D P+ DGCS+LLTDENM+LV AA+PE+V +F +E+ELK+
Sbjct: 474 LDVDET---VDLLDDCDFPQ--ICEEDGCSFLLTDENMDLVGAAYPEEVKRFRQEQELKD 528
Query: 545 TKSRRKGTGLRCQGTPEQSAGTSTKSVQLSIKEFY-RXXXXXXXXXXXXXXXKFTENIDX 369
K ++ T + Q + S ++K VQL+I EF+ +N D
Sbjct: 529 VKRKKNPTSI-SQENEKSSTSPNSKGVQLNITEFFPTTKSKHNPKHGEESSSNKNDNQDS 587
Query: 368 XXXXXXXXXXXXNLSKSARRRLLFD 294
N+ KS RRRLLFD
Sbjct: 588 GGSKPKRKSSSPNIPKSVRRRLLFD 612
>ref|XP_003534589.1| PREDICTED: flap endonuclease GEN-like 1-like [Glycine max]
Length = 607
Score = 462 bits (1190), Expect = e-127
Identities = 244/450 (54%), Positives = 312/450 (69%), Gaps = 4/450 (0%)
Frame = -1
Query: 1778 RECVELLKLLGMPVLRAKGEAEALCAQLNKEGHVDACITADSDVFLFGANCVIKSIRPNS 1599
+EC EL++LLGMPVL+AKGEAEALCAQLN EGHVDACITADSD FLFGA C+IK PNS
Sbjct: 122 QECAELVELLGMPVLKAKGEAEALCAQLNSEGHVDACITADSDAFLFGAKCIIKCFCPNS 181
Query: 1598 KEPFECYYMPDIEAGLGLKREHLIAISLLVGNDYDSIGVPGIGLETALKFVKYFSEDEIL 1419
KEPFECY M DIEAGLGLKR+HLIAISLLVG+D+D GV GIGL+TAL FVK FSED+IL
Sbjct: 182 KEPFECYNMSDIEAGLGLKRKHLIAISLLVGDDHDINGVRGIGLDTALHFVKAFSEDDIL 241
Query: 1418 NRLYEAGRGDKLQFPADICSVGGSVSCSYENLPEAKCRHCSLCGHPGSKKEHLKFPCEYC 1239
NRL+E G+G+ Q P I V +V N P K HCS CGHPGSKK+H+KFPCEYC
Sbjct: 242 NRLHEIGKGNTSQIPICI-KVEDNVD---GNSPNRKLSHCSFCGHPGSKKDHMKFPCEYC 297
Query: 1238 KSNAVEGCSKKPVAFKCNCSSCNMDRXXXXXXXXXXXXXKICNKISLEQNFPNKDIIAIY 1059
+ EGC +KP FKC+C SC+M+R +KI+ E NFP +II +Y
Sbjct: 298 VTKDDEGCQRKPEDFKCDCFSCDMNRKHKEKKRLENQHTIFFHKIAEEPNFPKDEIIDMY 357
Query: 1058 LKNDQESFIDADH-KLTWESPNVEMLADFLNYYQKWEPSYTRQRILPMLSTIFLRKMASN 882
L ND F +D + W +PN+EML +FLN++Q WEP+Y R+ + PM+STIFLR M +
Sbjct: 358 LCNDNGYFSASDSPHIVWGNPNIEMLINFLNFHQHWEPAYVRRMMFPMISTIFLRDMTTT 417
Query: 881 LTDDLLHEQYVFDSIHRVRIKFGHQLYVVKWKIATPAVGDTTSTIISKETVSSEPEESI- 705
+ L QY FDS+ RV++++G+Q +VVKWK A G S + + S + +++I
Sbjct: 418 TVETTLFGQYEFDSVERVKMRYGYQFFVVKWKRA----GVNISCKVPLKESSVQQDDAIE 473
Query: 704 --KYIDLLDESDIPETHFSSNDGCSYLLTDENMELVRAAFPEKVDQFLKEKELKETKSRR 531
+ +DLLD+ D PE H +DGCS+LLTDENM+LV AAFP +V +F +E+ELK R
Sbjct: 474 LDEMVDLLDDFDAPEIH--GDDGCSFLLTDENMDLVGAAFPAEVKRFWQEQELK----RI 527
Query: 530 KGTGLRCQGTPEQSAGTSTKSVQLSIKEFY 441
K + R Q E+S +++S+QL+I EFY
Sbjct: 528 KNSTSRSQEN-EKSPSPNSRSIQLNITEFY 556