BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000385
         (1644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]    75   7e-11
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               69   1e-10
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...    71   1e-09
gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]    69   1e-09
gb|ABI34316.1| S haplotype-specific F-box protein, putative [Sol...    70   2e-09

>gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]
          Length = 386

 Score = 74.7 bits (182), Expect = 7e-11
 Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 8/226 (3%)
 Frame = +3

Query: 3   LVRCRCVCKSWNSKFYNPDFLLSHLNPKTDDNDNDDYHILMNSYRERFNNVCIRSXXXXX 182
           L +  CV KSW     +P F+ +H+    DD     + ++  +    F    +       
Sbjct: 29  LSKFMCVSKSWLQLISSPTFVKNHIKLTADDKGYIHHRLIFRNIDGNFKFCSLPP----- 83

Query: 183 XXXXXXXXWCLSIFSRKQLSETRI-IDNYVPALSLSTSYIVNLVGSINGLVCMAFQFQHQ 359
                       +F+++Q +E    ID+ +   +LST    ++VGS+NGL+C+      Q
Sbjct: 84  ------------LFTKQQHTEELFHIDSPIERSTLST----HIVGSVNGLICVV---HGQ 124

Query: 360 QQFVLSNPTIRFSKKIIVPEHVGNDCFSPLLYGFGWDSVTNDYKLI-VKPIRNYEVSP-- 530
           ++  + NPTI  SK++  P+   N C S + YGFG+D   +DYK++ +    N+  S   
Sbjct: 125 KEAYIWNPTITKSKEL--PKFTSNMCSSSIKYGFGYDESRDDYKVVFIHYPYNHSSSSNM 182

Query: 531 ---AGVYSCKTDCW-SITENLRCPYLDATHHYNRPPCVVINGSPYW 656
                +YS + + W +  + L+C      +HY R     +NG  YW
Sbjct: 183 TTVVHIYSLRNNSWTTFRDQLQC---FLVNHYGR----FVNGKLYW 221


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 68.9 bits (167), Expect(2) = 1e-10
 Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
 Frame = +3

Query: 3   LVRCRCVCKSWNSKFYNPDFLLSHL-NPKTDDNDNDDYHILMNSYRERFNNVCIRSXXXX 179
           +VR RCVCKSW + F +PDF+  HL     + N    +  L +S +E +           
Sbjct: 37  IVRFRCVCKSWCTLFDDPDFISMHLRQASANSNGRLLFKHLSSSEQEIY----------- 85

Query: 180 XXXXXXXXXWCLSIFSRKQLSETRIIDNYVPALSLSTSYIVNLVGSINGLVCMA---FQF 350
                       S+ S    +E R ++  VP+    T Y   +VGS NGL+C+    F+ 
Sbjct: 86  ------------SLRSNIAFAEVRRLEVPVPS---KTDY-YQIVGSSNGLICLTESNFKG 129

Query: 351 QH-QQQFVLSNPTIRFSKKIIVPEHVGNDCFSPLL---YGFGWDSVTNDYKL--IVKPIR 512
            +      L NP IR  + +  P++  N+  SPL+    GF +  V NDYK+  IV  +R
Sbjct: 130 SYLSLNLFLWNPAIREFQTL--PKYHINNFTSPLMVVGLGFAFHPVINDYKVVRIVYFMR 187

Query: 513 NYEVSPAGVYSCKTDCWSITENLRCPYLDATHHYNRPPCVVINGSPYW 656
           N + S A VYS +T  W   +   C Y+     ++      ING+ +W
Sbjct: 188 N-KTSEADVYSLRTGSWRKVDANICCYI-----HSNVSRTFINGALHW 229



 Score = 25.0 bits (53), Expect(2) = 1e-10
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 13/104 (12%)
 Frame = +2

Query: 731  ILKFDTTSNEFKYLDLPNCAFYNLINLNDCLALITGK----YYSSPGGIGIVYSFDEEHN 898
            IL FD   + FK + LP+  +  LI    CLA   G     +Y +       Y  +E  +
Sbjct: 244  ILSFDMAKDVFKEIMLPDFGYDELI--RKCLADYKGSLSVLFYDA-------YHSNENCD 294

Query: 899  TWMKMYTIIDYTCMKHMKV---------YCFKSGGEIVFQENKN 1003
             W+     +  +  KH  +         + F   GE + Q+ K+
Sbjct: 295  VWVMEEYGVAKSWTKHFTIRHEIEIIIPFEFFDNGEAILQKKKS 338


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 4/222 (1%)
 Frame = +3

Query: 3   LVRCRCVCKSWNSKFYNPDFLLSHLNPKTDDNDNDDYHILMNSYRERFNNVCIRSXXXXX 182
           L +  CV KSW     +P F+  H+    +D     + ++  +    F    +       
Sbjct: 28  LSKFMCVSKSWLQLISSPAFVKKHIKLTANDKGYIYHRLIFRNTNNDFKFCPLPP----- 82

Query: 183 XXXXXXXXWCLSIFSRKQLSETRI-IDNYVPALSLSTSYIVNLVGSINGLVCMAFQFQHQ 359
                       +F+ +QL E  + ID+ +   +LST    ++VGS+NGL+C+A     Q
Sbjct: 83  ------------LFTNQQLIEEILHIDSPIERTTLST----HIVGSVNGLICVAHV--RQ 124

Query: 360 QQFVLSNPTIRFSKKIIVPEHVGNDCFSPLLYGFGWDSVTNDYKLIV--KPIRNYEVSPA 533
           ++  + NP I  SK++  P+   N C   +  GFG+D   +DYK++    PIR+   +  
Sbjct: 125 REAYIWNPAITKSKEL--PKSTSNLCSDGIKCGFGYDESRDDYKVVFIDYPIRHNHRTVV 182

Query: 534 GVYSCKTDCW-SITENLRCPYLDATHHYNRPPCVVINGSPYW 656
            +YS +T+ W ++ + L+  +L   H         +NG  YW
Sbjct: 183 NIYSLRTNSWTTLHDQLQGIFLLNLHGR------FVNGKLYW 218


>gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 327

 Score = 68.9 bits (167), Expect(2) = 1e-09
 Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 5/223 (2%)
 Frame = +3

Query: 3   LVRCRCVCKSWNSKFYNPDFLLSHLNPKTDDNDNDDYHILMNSYRERFNNVCIRSXXXXX 182
           L++  CV KSW     +P F+ +H+    DD     + ++  +  + F    +       
Sbjct: 29  LLKFMCVSKSWLQLISSPAFVKNHIKLTADDKGYIYHRLIFRNTNDDFKFCPLP------ 82

Query: 183 XXXXXXXXWCLSIFSRKQL-SETRIIDNYVPALSLSTSYIVNLVGSINGLVCMAFQFQHQ 359
                       +F+++QL  E   ID+ +   +LST    ++VGS+NGL+C A     Q
Sbjct: 83  -----------PLFTQQQLIKELYHIDSPIERTTLST----HIVGSVNGLICAA--HVRQ 125

Query: 360 QQFVLSNPTIRFSKKIIVPEHVGNDCFSPLLYGFGWDSVTNDYKLIV--KPI-RNYEVSP 530
           ++  + NPTI  SK++  P+   N C   +  GFG+D   +DYK++    PI R+   + 
Sbjct: 126 REAYIWNPTITKSKEL--PKSRSNLCSDGIKCGFGYDESRDDYKVVFIDYPIHRHNHRTV 183

Query: 531 AGVYSCKTDCW-SITENLRCPYLDATHHYNRPPCVVINGSPYW 656
             +YS +T  W ++ + L+  +L   H         +NG  YW
Sbjct: 184 VNIYSLRTKSWTTLHDQLQGFFLLNLHGR------FVNGKLYW 220



 Score = 21.9 bits (45), Expect(2) = 1e-09
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +2

Query: 722 VDGILKFDTTSNEFKYLDLPNCAFYN-LINL----NDCLALITGKYYSSPGGIGIVYSFD 886
           V  I  FD     ++ L+LP+C   N  IN+    +D   L T +  ++   + I+    
Sbjct: 231 VCNITSFDLADGTWERLELPSCGKDNSYINVGVVGSDLSLLYTCQRGAATSDVWIM-KHS 289

Query: 887 EEHNTWMKMYTI 922
             + +W K++TI
Sbjct: 290 GVNVSWTKLFTI 301


>gb|ABI34316.1| S haplotype-specific F-box protein, putative [Solanum demissum]
          Length = 190

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   LVRCRCVCKSWNSKFYNPDFLLSHLNPKTDDNDNDDYHILMNSYRERFNNVCIRSXXXXX 182
           L++ RCV KSW     +  F+ +HL    +D +   + I+       F   C+R      
Sbjct: 26  LLKFRCVSKSWLELISSAKFIKNHLKQTANDKEYSHHRIIFQESACNFKVCCLR------ 79

Query: 183 XXXXXXXXWCLSIFSRKQLSETRIIDNYVPALSLSTSYIVNLVGSINGLVCMAFQFQHQQ 362
                      S+ +++Q +E   I + +   S+ T     +VGS+NGL+C+   +   +
Sbjct: 80  -----------SMLNKEQSTELFDIGSPMENPSIYTW----IVGSVNGLICL---YSKIE 121

Query: 363 QFVLSNPTIRFSKKI-IVPEHVGNDCFSPLLYGFGWDSVTNDYKLIV 500
           + VL NP ++ SKK+  +   + N C   L YGFG+D   +DYK++V
Sbjct: 122 ETVLWNPAVKKSKKLPTLGAKLRNGCSYYLKYGFGYDETRDDYKVVV 168