BLASTX nr result

ID: Bupleurum21_contig00000381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000381
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform...    72   6e-25
emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]              74   4e-24
ref|XP_004141395.1| PREDICTED: putative cyclin-A3-1-like [Cucumi...    69   9e-24
dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]                    67   1e-23
ref|XP_003527726.1| PREDICTED: putative cyclin-A3-1-like [Glycin...    71   1e-23

>ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform 1 [Vitis vinifera]
           gi|302142243|emb|CBI19446.3| unnamed protein product
           [Vitis vinifera]
          Length = 365

 Score = 72.0 bits (175), Expect(2) = 6e-25
 Identities = 34/57 (59%), Positives = 44/57 (77%)
 Frame = -1

Query: 414 FMTLKIASSEEVVMMEANVLKSLKFEMGNPTVKTFLRRYNSVAQETQKIPCLKLQFL 244
           ++T    + EEVV MEA++LKSL FEMGNPT+KTFLRR+  +AQE  K P L+L+FL
Sbjct: 200 YITDNTYTKEEVVKMEADILKSLNFEMGNPTIKTFLRRFTRIAQENYKTPNLQLEFL 256



 Score = 67.0 bits (162), Expect(2) = 6e-25
 Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
 Frame = -3

Query: 241 YLAELSLLDYECIKFLPSLVAASVIFLARLTINSDVHPWVNVPKTKKTYCKS--KEC 77
           YLAELSLLDY C+KFLPS+VAASVIFL+R T+    HPW +  +    Y  S  KEC
Sbjct: 259 YLAELSLLDYGCVKFLPSMVAASVIFLSRFTLRPKTHPWCSSLQHHSGYKPSELKEC 315


>emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 384

 Score = 74.3 bits (181), Expect(2) = 4e-24
 Identities = 37/58 (63%), Positives = 45/58 (77%)
 Frame = -1

Query: 414 FMTLKIASSEEVVMMEANVLKSLKFEMGNPTVKTFLRRYNSVAQETQKIPCLKLQFLG 241
           ++T    + EEVV MEA+VLK+L FEMGNPTVKTFLRR+  VAQE  K P L+L+FLG
Sbjct: 218 YITDNTYTKEEVVKMEADVLKTLNFEMGNPTVKTFLRRFTGVAQEDYKTPNLQLEFLG 275



 Score = 62.0 bits (149), Expect(2) = 4e-24
 Identities = 24/39 (61%), Positives = 34/39 (87%)
 Frame = -3

Query: 241 YLAELSLLDYECIKFLPSLVAASVIFLARLTINSDVHPW 125
           YLAELS+LDY C+K++PSL+AA+V+FL+R T+  + HPW
Sbjct: 277 YLAELSILDYSCVKYVPSLLAAAVVFLSRFTLQPNTHPW 315


>ref|XP_004141395.1| PREDICTED: putative cyclin-A3-1-like [Cucumis sativus]
           gi|449511717|ref|XP_004164035.1| PREDICTED: putative
           cyclin-A3-1-like [Cucumis sativus]
          Length = 376

 Score = 68.9 bits (167), Expect(2) = 9e-24
 Identities = 33/58 (56%), Positives = 44/58 (75%)
 Frame = -1

Query: 414 FMTLKIASSEEVVMMEANVLKSLKFEMGNPTVKTFLRRYNSVAQETQKIPCLKLQFLG 241
           ++T    + EEVV MEA +LKSL+FE+GNPT+KTFLRR+  VAQET +   L+ +FLG
Sbjct: 211 YITDNTYNREEVVEMEAEILKSLEFELGNPTIKTFLRRFTLVAQETYEFNTLQFEFLG 268



 Score = 66.2 bits (160), Expect(2) = 9e-24
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -3

Query: 241 YLAELSLLDYECIKFLPSLVAASVIFLARLTINSDVHPWVN 119
           YLAELSLLDY C+KFLPSLVAASV FLAR  I S  HPW +
Sbjct: 270 YLAELSLLDYNCVKFLPSLVAASVTFLARFMIQSKKHPWTS 310


>dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]
          Length = 372

 Score = 67.4 bits (163), Expect(2) = 1e-23
 Identities = 34/58 (58%), Positives = 41/58 (70%)
 Frame = -1

Query: 414 FMTLKIASSEEVVMMEANVLKSLKFEMGNPTVKTFLRRYNSVAQETQKIPCLKLQFLG 241
           ++T      EEVV MEA+VLK LKFEMGNPT+KTFLRR   V Q+  K P L+ +FLG
Sbjct: 209 YITDNTYKKEEVVKMEADVLKFLKFEMGNPTIKTFLRRLTRVVQDGDKNPNLQFEFLG 266



 Score = 67.4 bits (163), Expect(2) = 1e-23
 Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
 Frame = -3

Query: 241 YLAELSLLDYECIKFLPSLVAASVIFLARLTINSDVHPWVNVPKTKKTY--CKSKEC 77
           YLAELSLLDY C+KFLPSL+A+SVIFL+R T+   VHPW ++ +    Y     KEC
Sbjct: 268 YLAELSLLDYGCVKFLPSLIASSVIFLSRFTLQPKVHPWNSLLQHNSGYKPADLKEC 324


>ref|XP_003527726.1| PREDICTED: putative cyclin-A3-1-like [Glycine max]
          Length = 358

 Score = 70.9 bits (172), Expect(2) = 1e-23
 Identities = 34/50 (68%), Positives = 40/50 (80%)
 Frame = -1

Query: 384 EVVMMEANVLKSLKFEMGNPTVKTFLRRYNSVAQETQKIPCLKLQFLGTW 235
           EVV MEA++LKSLKFEMGNPTV TFLRRY  VA   QK P L++ FLG++
Sbjct: 197 EVVKMEADILKSLKFEMGNPTVSTFLRRYADVASNDQKTPNLQIDFLGSY 246



 Score = 63.5 bits (153), Expect(2) = 1e-23
 Identities = 27/41 (65%), Positives = 35/41 (85%)
 Frame = -3

Query: 241 YLAELSLLDYECIKFLPSLVAASVIFLARLTINSDVHPWVN 119
           Y+ ELSLLDY+C++FLPS+VAASVIFLA+  I  +VHPW +
Sbjct: 246 YIGELSLLDYDCLRFLPSIVAASVIFLAKFIICPEVHPWTS 286


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