BLASTX nr result

ID: Bupleurum21_contig00000375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000375
         (4367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog...   291   8e-76
ref|XP_003633386.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore ...   290   2e-75
ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog...   288   9e-75
ref|XP_003633385.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore ...   287   2e-74
emb|CAN66776.1| hypothetical protein VITISV_035303 [Vitis vinifera]   286   3e-74

>ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  291 bits (746), Expect = 8e-76
 Identities = 159/290 (54%), Positives = 195/290 (67%), Gaps = 1/290 (0%)
 Frame = +2

Query: 20   KDVLEEQKNVLVENMNELEGKVESLNNGPSPKDVLEEQKNVLEEDVKKFFYTMIEH-GHI 196
            +D + E    L + + E EG++E L +GPS K+V+E+ + VLEEDVKKF   + E  G I
Sbjct: 205  RDAVAEGVKALEKEVAEREGRLEELRSGPSAKEVVEKVRGVLEEDVKKFHAIIAEFSGRI 264

Query: 197  VNVQKTLDXXXXXXXXXXXXXXMICEENEELKIRVKEQAFNLEDAERMKRDFMGVERDIG 376
             +V+K L+               ICEENEELK RV+ Q FN  DAERMKR+   VERDI 
Sbjct: 265  ASVEKILEEKEKELGVKVEENNRICEENEELKKRVELQTFNARDAERMKRELQAVERDIT 324

Query: 377  EAEAARNTWEEKFWELDGEIGKKFKELQSLMIECNQAIRKLNIGNGFQYELNAKGSTPAE 556
            EAE ARN WEEK W+LD  IG KFKEL++L IECNQA+R+L +GNG QY LNAKGS+P E
Sbjct: 325  EAEVARNGWEEKSWDLDTTIGHKFKELEALSIECNQALRRLKLGNGLQYVLNAKGSSPTE 384

Query: 557  VLGVGYXXXXXXXXXXXXDEIKKSSMVMLEEQISLQKISVENANQIEAKRNRIDALQSHI 736
            VLG+ Y            D+I KSSM  LEE ISLQ+ SVENA +IEAKRNR+ ALQS  
Sbjct: 385  VLGIDYKSALKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSRS 444

Query: 737  DEVVFQLNLLKDESQEYISRCMMEARKLVEFVEAEEQHFNVVEGEAAELL 886
            DEV  QLN LK E+Q Y SRC MEA+KLVE VE E  + ++VE E A++L
Sbjct: 445  DEVEAQLNFLKKETQNYTSRCAMEAKKLVEDVEIETHNVDIVEREVADVL 494


>ref|XP_003633386.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore protein NDC80 homolog
            [Vitis vinifera]
          Length = 627

 Score =  290 bits (743), Expect = 2e-75
 Identities = 157/292 (53%), Positives = 197/292 (67%), Gaps = 1/292 (0%)
 Frame = +2

Query: 20   KDVLEEQKNVLVENMNELEGKVESLNNGPSPKDVLEEQKNVLEEDVKKFFYTMIEH-GHI 196
            +D + +    L + + E EG++E L +GPS K+V+E+++ VLEEDVKKF   + E  G I
Sbjct: 251  RDAVAKGVKALEKEVAEREGRLEELRSGPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRI 310

Query: 197  VNVQKTLDXXXXXXXXXXXXXXMICEENEELKIRVKEQAFNLEDAERMKRDFMGVERDIG 376
             +V+K LD               ICEENEELK RV+ Q FN  DAERMKR+   VERDI 
Sbjct: 311  ASVEKILDEKEKELGVKVEENNRICEENEELKKRVELQTFNARDAERMKRELQAVERDIT 370

Query: 377  EAEAARNTWEEKFWELDGEIGKKFKELQSLMIECNQAIRKLNIGNGFQYELNAKGSTPAE 556
            EAE ARN WEEK W++D  IG KFKEL++L IECNQA+R+L +GNG QY LNAKGS PAE
Sbjct: 371  EAEVARNGWEEKSWDVDTTIGHKFKELEALSIECNQALRRLKLGNGLQYVLNAKGSLPAE 430

Query: 557  VLGVGYXXXXXXXXXXXXDEIKKSSMVMLEEQISLQKISVENANQIEAKRNRIDALQSHI 736
            VLG+ Y            D+I K SM+ LEE ISLQ+ SVENA +IEAKRNR+ ALQ+  
Sbjct: 431  VLGIDYKSTLKPALDSFADDINKCSMLKLEELISLQEQSVENAAKIEAKRNRLAALQTSS 490

Query: 737  DEVVFQLNLLKDESQEYISRCMMEARKLVEFVEAEEQHFNVVEGEAAELLRV 892
            DEV  QLN LK E+Q Y SRC MEA+KLVE VE E  + ++VE E A++L +
Sbjct: 491  DEVEAQLNFLKKETQNYTSRCAMEAKKLVEDVEIETYNVDIVEREVADVLEM 542


>ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  288 bits (737), Expect = 9e-75
 Identities = 159/290 (54%), Positives = 194/290 (66%), Gaps = 1/290 (0%)
 Frame = +2

Query: 20   KDVLEEQKNVLVENMNELEGKVESLNNGPSPKDVLEEQKNVLEEDVKKFFYTMIEH-GHI 196
            +D + E    L + + E EG++E L  GPS K+V+E+++ VLEEDVKKF   + E  G I
Sbjct: 205  RDAVAEGVKALEKEVAEREGRLEELRLGPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRI 264

Query: 197  VNVQKTLDXXXXXXXXXXXXXXMICEENEELKIRVKEQAFNLEDAERMKRDFMGVERDIG 376
             +V+K L+               ICEENEELK RV+ Q FN  DAERMKR+   VERDI 
Sbjct: 265  ASVEKILEEKEKELGVKVEENNRICEENEELKKRVELQTFNARDAERMKRELQAVERDIT 324

Query: 377  EAEAARNTWEEKFWELDGEIGKKFKELQSLMIECNQAIRKLNIGNGFQYELNAKGSTPAE 556
            EAE ARN WEEK W+LD  IG KFKEL++L IECNQA+R+L +GNG QY LNAKGS+PAE
Sbjct: 325  EAEVARNGWEEKSWDLDTTIGHKFKELEALSIECNQALRRLKLGNGLQYVLNAKGSSPAE 384

Query: 557  VLGVGYXXXXXXXXXXXXDEIKKSSMVMLEEQISLQKISVENANQIEAKRNRIDALQSHI 736
            VLG+ Y            D+I KSSM  LEE ISLQ+ SVENA +IEAKRNR+ ALQS  
Sbjct: 385  VLGIDYKSTLKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSSS 444

Query: 737  DEVVFQLNLLKDESQEYISRCMMEARKLVEFVEAEEQHFNVVEGEAAELL 886
            DEV  QL  LK ESQ Y SRC  EA+KLVE VE E  + ++VE E A++L
Sbjct: 445  DEVEAQLIFLKKESQNYTSRCATEAKKLVEDVEIETHNVDIVEREVADVL 494


>ref|XP_003633385.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore protein ndc80-like [Vitis
            vinifera]
          Length = 552

 Score =  287 bits (734), Expect = 2e-74
 Identities = 155/292 (53%), Positives = 196/292 (67%), Gaps = 1/292 (0%)
 Frame = +2

Query: 20   KDVLEEQKNVLVENMNELEGKVESLNNGPSPKDVLEEQKNVLEEDVKKFFYTMIEH-GHI 196
            +D + +    L + + E EG++E L +GPS K+V+E+++ VLEEDVKKF   + E  G I
Sbjct: 186  RDAVAKGVKALEKEVAEREGRLEELRSGPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRI 245

Query: 197  VNVQKTLDXXXXXXXXXXXXXXMICEENEELKIRVKEQAFNLEDAERMKRDFMGVERDIG 376
             +V+K LD               ICEENEELK RV+ Q FN  DAERMKR+   VERDI 
Sbjct: 246  ASVEKILDEKEKELGVKVEENNRICEENEELKKRVELQTFNARDAERMKRELQAVERDIT 305

Query: 377  EAEAARNTWEEKFWELDGEIGKKFKELQSLMIECNQAIRKLNIGNGFQYELNAKGSTPAE 556
            EAE ARN WEEK W++D  IG KFKEL++L IECNQA+ +L +GNG QY LNAKGS PAE
Sbjct: 306  EAEVARNGWEEKSWDVDTTIGHKFKELEALSIECNQALWRLKLGNGLQYVLNAKGSLPAE 365

Query: 557  VLGVGYXXXXXXXXXXXXDEIKKSSMVMLEEQISLQKISVENANQIEAKRNRIDALQSHI 736
            VLG+ Y            D+I K SM+ LEE ISLQ+ SVENA +IEAK+NR+ ALQ+  
Sbjct: 366  VLGIDYKSTLKPALDSFADDINKCSMLKLEELISLQEQSVENAAKIEAKKNRLAALQTSC 425

Query: 737  DEVVFQLNLLKDESQEYISRCMMEARKLVEFVEAEEQHFNVVEGEAAELLRV 892
            DEV  QLN LK E+Q Y SRC MEA+KLVE VE E  + ++VE E A++L +
Sbjct: 426  DEVEAQLNFLKKETQNYTSRCAMEAKKLVEDVEIETHNVDIVEREVADVLEM 477


>emb|CAN66776.1| hypothetical protein VITISV_035303 [Vitis vinifera]
          Length = 735

 Score =  286 bits (732), Expect = 3e-74
 Identities = 159/290 (54%), Positives = 194/290 (66%), Gaps = 1/290 (0%)
 Frame = +2

Query: 20   KDVLEEQKNVLVENMNELEGKVESLNNGPSPKDVLEEQKNVLEEDVKKFFYTMIEH-GHI 196
            +D + E    L + + E EG++E L +GPS K+V+E+++ VLEEDVKKF   + E  G I
Sbjct: 205  RDAVAEGVKALEKEVAEREGRLEELRSGPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRI 264

Query: 197  VNVQKTLDXXXXXXXXXXXXXXMICEENEELKIRVKEQAFNLEDAERMKRDFMGVERDIG 376
             +V+K L+               ICEENEELK RV+ Q FN  DAERMKR+   VERDI 
Sbjct: 265  ASVEKILEEKEKELGVKVEENNRICEENEELKKRVELQTFNARDAERMKRELQAVERDIT 324

Query: 377  EAEAARNTWEEKFWELDGEIGKKFKELQSLMIECNQAIRKLNIGNGFQYELNAKGSTPAE 556
            EAE ARN WEEK W+LD  IG KFKEL++L IECNQA+R+L +GNG QY LNAKGS+P E
Sbjct: 325  EAEVARNGWEEKSWDLDTTIGHKFKELEALSIECNQALRRLKLGNGLQYVLNAKGSSPXE 384

Query: 557  VLGVGYXXXXXXXXXXXXDEIKKSSMVMLEEQISLQKISVENANQIEAKRNRIDALQSHI 736
            VLG+ Y            D+I KSSM  LEE ISLQ+ SVENA +IEAKRNR+ ALQS  
Sbjct: 385  VLGIDYKSXLKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSXS 444

Query: 737  DEVVFQLNLLKDESQEYISRCMMEARKLVEFVEAEEQHFNVVEGEAAELL 886
            DEV  QL  LK ESQ Y SRC  EA+KLVE VE E  + + VE E A++L
Sbjct: 445  DEVEAQLIFLKKESQNYTSRCATEAKKLVEDVEIETHNVDXVEREVADVL 494


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