BLASTX nr result

ID: Bupleurum21_contig00000368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000368
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83522.1| hypothetical protein VITISV_019056 [Vitis vinifera]   211   5e-53
ref|XP_004139499.1| PREDICTED: uncharacterized protein LOC101209...   210   9e-53
gb|AEC10974.1| 16kda membrane protein [Camellia sinensis]             209   1e-52
ref|XP_002328107.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-52
ref|XP_002273037.1| PREDICTED: uncharacterized protein LOC100244...   209   2e-52

>emb|CAN83522.1| hypothetical protein VITISV_019056 [Vitis vinifera]
          Length = 144

 Score =  211 bits (537), Expect = 5e-53
 Identities = 101/132 (76%), Positives = 117/132 (88%)
 Frame = +3

Query: 42  AASTIVGLGTSSLSSPSNIVSAKQTSSLTSGFLRSPVTARNPLRLAQASGGRFTCFERDW 221
           AAST++GLG+SSLS P+   S+K+T  L SGF+++PV  RNPLR A+A GG+FTCFERDW
Sbjct: 3   AASTVIGLGSSSLS-PARSSSSKRTH-LASGFVKAPVAPRNPLRQAKACGGKFTCFERDW 60

Query: 222 LRRDLNVIGFGLIGWLAPSSIPVINGDSLTGLFFSSIGTELAHFPTPPALTSPFWLWLVT 401
           LR DLNVIGFGLI WLAPSSIP I+G+SLTGLFFSSIGTEL+HFPT PALTSPFWLW+VT
Sbjct: 61  LRTDLNVIGFGLIAWLAPSSIPAIDGNSLTGLFFSSIGTELSHFPTGPALTSPFWLWMVT 120

Query: 402 WHLGLFICLTFG 437
           WHLGLF+CLTFG
Sbjct: 121 WHLGLFLCLTFG 132


>ref|XP_004139499.1| PREDICTED: uncharacterized protein LOC101209111 [Cucumis sativus]
          Length = 146

 Score =  210 bits (535), Expect = 9e-53
 Identities = 100/134 (74%), Positives = 114/134 (85%)
 Frame = +3

Query: 36  ALAASTIVGLGTSSLSSPSNIVSAKQTSSLTSGFLRSPVTARNPLRLAQASGGRFTCFER 215
           A A S++ GLGT+SLSSPS+     ++  L SGF++ PV ARNPL +A ASGG+FTCFER
Sbjct: 4   AFATSSVAGLGTASLSSPSS-----RSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFER 58

Query: 216 DWLRRDLNVIGFGLIGWLAPSSIPVINGDSLTGLFFSSIGTELAHFPTPPALTSPFWLWL 395
           DWLRRDLNVIGFGLIGW+APSSIPVI+G SLTGLFF SIG ELAHFP+PPALTS FWLWL
Sbjct: 59  DWLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 118

Query: 396 VTWHLGLFICLTFG 437
           +TWHLGLFI LTFG
Sbjct: 119 ITWHLGLFITLTFG 132


>gb|AEC10974.1| 16kda membrane protein [Camellia sinensis]
          Length = 150

 Score =  209 bits (533), Expect = 1e-52
 Identities = 102/135 (75%), Positives = 114/135 (84%)
 Frame = +3

Query: 33  MALAASTIVGLGTSSLSSPSNIVSAKQTSSLTSGFLRSPVTARNPLRLAQASGGRFTCFE 212
           MA A++ +VGLGTSSLS  S + S K T+SL S FL+SPV  RNPL  A ASGG+FTCFE
Sbjct: 5   MATASTAVVGLGTSSLSLSSRVSSPK-TTSLNSAFLKSPVRVRNPLVQAHASGGKFTCFE 63

Query: 213 RDWLRRDLNVIGFGLIGWLAPSSIPVINGDSLTGLFFSSIGTELAHFPTPPALTSPFWLW 392
           RDWLR DLNVIGFGLIGWLAPSS+P ING+SLTGLFFSSIGTEL+HFPT PAL SPFWLW
Sbjct: 64  RDWLRTDLNVIGFGLIGWLAPSSVPAINGNSLTGLFFSSIGTELSHFPTGPALDSPFWLW 123

Query: 393 LVTWHLGLFICLTFG 437
           +V  HLGLF+CLTFG
Sbjct: 124 MVCCHLGLFLCLTFG 138


>ref|XP_002328107.1| predicted protein [Populus trichocarpa] gi|222837622|gb|EEE75987.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  209 bits (533), Expect = 1e-52
 Identities = 100/130 (76%), Positives = 110/130 (84%)
 Frame = +3

Query: 48  STIVGLGTSSLSSPSNIVSAKQTSSLTSGFLRSPVTARNPLRLAQASGGRFTCFERDWLR 227
           S +VGLG+ SLSSPS I S K+   L+SGF++SPVTARNPL LA   GG+F CF+ DWLR
Sbjct: 9   SAVVGLGSGSLSSPSRISSPKKIC-LSSGFVKSPVTARNPLGLAGTGGGKFMCFQGDWLR 67

Query: 228 RDLNVIGFGLIGWLAPSSIPVINGDSLTGLFFSSIGTELAHFPTPPALTSPFWLWLVTWH 407
           +DLNVIGFGLIGWLAPSS+P I G SLTGLFF SIGTELAHFPTPP LTS FWLWLVTWH
Sbjct: 68  KDLNVIGFGLIGWLAPSSVPAIGGKSLTGLFFESIGTELAHFPTPPPLTSQFWLWLVTWH 127

Query: 408 LGLFICLTFG 437
           LGLFICLTFG
Sbjct: 128 LGLFICLTFG 137


>ref|XP_002273037.1| PREDICTED: uncharacterized protein LOC100244962 isoform 1 [Vitis
           vinifera] gi|359479489|ref|XP_003632280.1| PREDICTED:
           uncharacterized protein LOC100244962 isoform 2 [Vitis
           vinifera] gi|296084873|emb|CBI28282.3| unnamed protein
           product [Vitis vinifera]
          Length = 148

 Score =  209 bits (531), Expect = 2e-52
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 42  AASTIVGLGTSSLSSPSNIVSAKQTSSLTSGFLRSPVTARNPLRLAQASGGRFTCFERDW 221
           AAST++GLG+SSLS P+   S+K+T  L SGF+++PV  RNPL  A+A GG+FTCFERDW
Sbjct: 7   AASTVIGLGSSSLS-PTRSSSSKRTH-LASGFVKAPVAPRNPLMQAKACGGKFTCFERDW 64

Query: 222 LRRDLNVIGFGLIGWLAPSSIPVINGDSLTGLFFSSIGTELAHFPTPPALTSPFWLWLVT 401
           LR DLNVIGFGLI WLAPSSIP I+G+SLTGLFFSSIGTEL+HFPT PALTSPFWLW+VT
Sbjct: 65  LRTDLNVIGFGLIAWLAPSSIPAIDGNSLTGLFFSSIGTELSHFPTGPALTSPFWLWMVT 124

Query: 402 WHLGLFICLTFG 437
           WHLGLF+CLTFG
Sbjct: 125 WHLGLFLCLTFG 136


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