BLASTX nr result

ID: Bupleurum21_contig00000367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000367
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141496.1| PREDICTED: cyclin-B1-2-like [Cucumis sativus]     155   7e-36
ref|XP_002283197.1| PREDICTED: cyclin-B1-2 [Vitis vinifera] gi|2...   152   6e-35
gb|AFK46972.1| unknown [Lotus japonicus]                              150   2e-34
ref|NP_001190435.1| protein acclimation of photosynthesis to env...   150   2e-34
emb|CAN69726.1| hypothetical protein VITISV_009153 [Vitis vinifera]   149   3e-34

>ref|XP_004141496.1| PREDICTED: cyclin-B1-2-like [Cucumis sativus]
          Length = 141

 Score =  155 bits (391), Expect = 7e-36
 Identities = 81/141 (57%), Positives = 92/141 (65%), Gaps = 11/141 (7%)
 Frame = -2

Query: 581 MEGSKKIEQEIGGLKNDALRFGLQGVKSDIVGSHPLXXXXXXXXXXXXXXXXXXXXXXXX 402
           ME SK I  EIGG++NDALRFGLQGVKSD+VGSHP+                        
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 401 XXXXXXX-----------RPPGAIPSSMLGLESMTGALENFGVEDYLNDPRDSETLRPAD 255
                             RPPG IPSSMLGLE++TG+L++FG EDYLNDPR+SE+LRP D
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 254 MHHGMEVRLGLSKGPVCPSFM 192
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141


>ref|XP_002283197.1| PREDICTED: cyclin-B1-2 [Vitis vinifera]
           gi|298204380|emb|CBI16860.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  152 bits (383), Expect = 6e-35
 Identities = 80/141 (56%), Positives = 90/141 (63%), Gaps = 11/141 (7%)
 Frame = -2

Query: 581 MEGSKKIEQEIGGLKNDALRFGLQGVKSDIVGSHPLXXXXXXXXXXXXXXXXXXXXXXXX 402
           ME  K I  EIGG++NDALRFGLQGVKSDIVGSHPL                        
Sbjct: 1   MEAPKTIAHEIGGVRNDALRFGLQGVKSDIVGSHPLESAYQSQREIQEGMKRKILANTYG 60

Query: 401 XXXXXXX-----------RPPGAIPSSMLGLESMTGALENFGVEDYLNDPRDSETLRPAD 255
                             RPPGAIPSSMLGLE++TG+L+NFG EDYL+DP DSET RPAD
Sbjct: 61  TAFPLKMDLDAQILSRFQRPPGAIPSSMLGLEALTGSLDNFGFEDYLSDPCDSETFRPAD 120

Query: 254 MHHGMEVRLGLSKGPVCPSFM 192
           MHHGMEVR G+SKGP+CPSF+
Sbjct: 121 MHHGMEVRHGISKGPICPSFI 141


>gb|AFK46972.1| unknown [Lotus japonicus]
          Length = 142

 Score =  150 bits (378), Expect = 2e-34
 Identities = 79/140 (56%), Positives = 90/140 (64%), Gaps = 11/140 (7%)
 Frame = -2

Query: 578 EGSKKIEQEIGGLKNDALRFGLQGVKSDIVGSHPLXXXXXXXXXXXXXXXXXXXXXXXXX 399
           E +K I  +IGG++NDALRFGLQGVKSDIVGSHPL                         
Sbjct: 3   EAAKSIAHQIGGIQNDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLYGA 62

Query: 398 XXXXXX-----------RPPGAIPSSMLGLESMTGALENFGVEDYLNDPRDSETLRPADM 252
                            RP GAIPSSMLGLE+ TG+L++FG EDYL+DPR+SET+RP DM
Sbjct: 63  AFPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFTGSLDDFGFEDYLSDPRESETIRPLDM 122

Query: 251 HHGMEVRLGLSKGPVCPSFM 192
           HHGMEVRLGLSKGPVCPSFM
Sbjct: 123 HHGMEVRLGLSKGPVCPSFM 142


>ref|NP_001190435.1| protein acclimation of photosynthesis to environment [Arabidopsis
           thaliana] gi|332006963|gb|AED94346.1| protein
           acclimation of photosynthesis to environment
           [Arabidopsis thaliana]
          Length = 431

 Score =  150 bits (378), Expect = 2e-34
 Identities = 82/149 (55%), Positives = 90/149 (60%), Gaps = 11/149 (7%)
 Frame = -2

Query: 605 RERKRRVIMEGSKKIEQEIGGLKNDALRFGLQGVKSDIVGSHPLXXXXXXXXXXXXXXXX 426
           ++R+ R  ME  KKI  EIGG+KNDALRFGL GVKSDI+ SHPL                
Sbjct: 283 KKRRGRGEMESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKR 342

Query: 425 XXXXXXXXXXXXXXX-----------RPPGAIPSSMLGLESMTGALENFGVEDYLNDPRD 279
                                     RPPG IPSSMLGLE  TGAL+NFG EDYLNDPR+
Sbjct: 343 RVITHTYGAALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRE 402

Query: 278 SETLRPADMHHGMEVRLGLSKGPVCPSFM 192
           SETL+P D HHGMEVRLGLSKGP  PSFM
Sbjct: 403 SETLKPVDFHHGMEVRLGLSKGPASPSFM 431


>emb|CAN69726.1| hypothetical protein VITISV_009153 [Vitis vinifera]
          Length = 141

 Score =  149 bits (377), Expect = 3e-34
 Identities = 80/141 (56%), Positives = 89/141 (63%), Gaps = 11/141 (7%)
 Frame = -2

Query: 581 MEGSKKIEQEIGGLKNDALRFGLQGVKSDIVGSHPLXXXXXXXXXXXXXXXXXXXXXXXX 402
           ME  K I  EIGG++NDALRFGLQGVKSDIVGSHPL                        
Sbjct: 1   MEAPKTIAHEIGGVRNDALRFGLQGVKSDIVGSHPLESAYQSQREIQEGMKRXILANTYG 60

Query: 401 XXXXXXX-----------RPPGAIPSSMLGLESMTGALENFGVEDYLNDPRDSETLRPAD 255
                             RPPGAIPSSMLGLE++TG+L+NFG EDYL DP DSE  RPAD
Sbjct: 61  TAFPLKMDLDAQILSRFQRPPGAIPSSMLGLEALTGSLDNFGFEDYLXDPCDSEXFRPAD 120

Query: 254 MHHGMEVRLGLSKGPVCPSFM 192
           MHHGMEVR G+SKGP+CPSF+
Sbjct: 121 MHHGMEVRXGISKGPICPSFI 141


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