BLASTX nr result

ID: Bupleurum21_contig00000355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000355
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539116.1| PREDICTED: INO80 complex subunit C-like [Gly...   226   2e-57
gb|AFK46232.1| unknown [Medicago truncatula]                          224   7e-57
gb|AFK40444.1| unknown [Lotus japonicus]                              224   7e-57
ref|XP_003601484.1| INO80 complex subunit C [Medicago truncatula...   224   7e-57
ref|XP_002521261.1| conserved hypothetical protein [Ricinus comm...   223   9e-57

>ref|XP_003539116.1| PREDICTED: INO80 complex subunit C-like [Glycine max]
          Length = 178

 Score =  226 bits (575), Expect = 2e-57
 Identities = 102/124 (82%), Positives = 116/124 (93%)
 Frame = +2

Query: 14  MEQEVIDAEIVLPTHLSFKKIQMYEKFPKGQSRGRHWKHLKQIIQAENYQNYPADEPNYV 193
           ME EV++AE+VLP++LSFK++QMYEK+PKGQ+RGRHWKHLKQIIQAENYQNYP DEPNY 
Sbjct: 55  MEAEVVEAELVLPSYLSFKRVQMYEKYPKGQARGRHWKHLKQIIQAENYQNYPPDEPNYA 114

Query: 194 NIESPPSMHPNKKICDITGYEAPYHDPRTKLRYANTEVFKQIRSLPNEYVQSYLTLRNAA 373
           NIESPPSMHP K+ICDITG+EAPYHDPRT LRYAN EVFK IRSLPNEYVQ YL+LRNAA
Sbjct: 115 NIESPPSMHPCKRICDITGFEAPYHDPRTNLRYANAEVFKIIRSLPNEYVQRYLSLRNAA 174

Query: 374 VVLR 385
           +VL+
Sbjct: 175 IVLK 178


>gb|AFK46232.1| unknown [Medicago truncatula]
          Length = 129

 Score =  224 bits (570), Expect = 7e-57
 Identities = 103/124 (83%), Positives = 115/124 (92%)
 Frame = +2

Query: 14  MEQEVIDAEIVLPTHLSFKKIQMYEKFPKGQSRGRHWKHLKQIIQAENYQNYPADEPNYV 193
           ME EV+DAE+VLP +LSFK+IQMY+K+PKGQSRGRHWKHLKQIIQAENYQNYP DEPNYV
Sbjct: 6   MEAEVVDAELVLPNYLSFKRIQMYDKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYV 65

Query: 194 NIESPPSMHPNKKICDITGYEAPYHDPRTKLRYANTEVFKQIRSLPNEYVQSYLTLRNAA 373
           NIESPPSMHP K+ICDITGYEAPY+DP+T LRYANT+VFK IRSLPNE VQ YL +RNAA
Sbjct: 66  NIESPPSMHPCKRICDITGYEAPYYDPKTNLRYANTDVFKMIRSLPNESVQRYLGMRNAA 125

Query: 374 VVLR 385
           VVL+
Sbjct: 126 VVLK 129


>gb|AFK40444.1| unknown [Lotus japonicus]
          Length = 124

 Score =  224 bits (570), Expect = 7e-57
 Identities = 102/124 (82%), Positives = 116/124 (93%)
 Frame = +2

Query: 14  MEQEVIDAEIVLPTHLSFKKIQMYEKFPKGQSRGRHWKHLKQIIQAENYQNYPADEPNYV 193
           ME EV+DAE+VLP +LSFK++QM+EK+PKGQSRGRHWKHLKQIIQAENYQNYP D+PNYV
Sbjct: 1   MEAEVVDAELVLPNYLSFKRVQMHEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDQPNYV 60

Query: 194 NIESPPSMHPNKKICDITGYEAPYHDPRTKLRYANTEVFKQIRSLPNEYVQSYLTLRNAA 373
           NIESPPSMHP K+ICDITGYEAPY+DPRT LRYANT+VFK IR+LPN+YVQ YL LRNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANTDVFKIIRALPNDYVQRYLALRNAA 120

Query: 374 VVLR 385
           VVL+
Sbjct: 121 VVLK 124


>ref|XP_003601484.1| INO80 complex subunit C [Medicago truncatula]
           gi|355490532|gb|AES71735.1| INO80 complex subunit C
           [Medicago truncatula]
          Length = 124

 Score =  224 bits (570), Expect = 7e-57
 Identities = 103/124 (83%), Positives = 115/124 (92%)
 Frame = +2

Query: 14  MEQEVIDAEIVLPTHLSFKKIQMYEKFPKGQSRGRHWKHLKQIIQAENYQNYPADEPNYV 193
           ME EV+DAE+VLP +LSFK+IQMY+K+PKGQSRGRHWKHLKQIIQAENYQNYP DEPNYV
Sbjct: 1   MEAEVVDAELVLPNYLSFKRIQMYDKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYV 60

Query: 194 NIESPPSMHPNKKICDITGYEAPYHDPRTKLRYANTEVFKQIRSLPNEYVQSYLTLRNAA 373
           NIESPPSMHP K+ICDITGYEAPY+DP+T LRYANT+VFK IRSLPNE VQ YL +RNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPKTNLRYANTDVFKMIRSLPNESVQRYLGMRNAA 120

Query: 374 VVLR 385
           VVL+
Sbjct: 121 VVLK 124


>ref|XP_002521261.1| conserved hypothetical protein [Ricinus communis]
           gi|223539529|gb|EEF41117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  223 bits (569), Expect = 9e-57
 Identities = 103/124 (83%), Positives = 114/124 (91%)
 Frame = +2

Query: 14  MEQEVIDAEIVLPTHLSFKKIQMYEKFPKGQSRGRHWKHLKQIIQAENYQNYPADEPNYV 193
           ME EVI AE+VLPTHLSFKKIQMYEK+PKGQ+RGRHWKHLKQI+QAENYQNYP DEPNYV
Sbjct: 1   MEAEVIKAELVLPTHLSFKKIQMYEKYPKGQARGRHWKHLKQILQAENYQNYPPDEPNYV 60

Query: 194 NIESPPSMHPNKKICDITGYEAPYHDPRTKLRYANTEVFKQIRSLPNEYVQSYLTLRNAA 373
           NIESPPSMHP K+ICDITG+EAPY DPRT LRYA+ +VFK +RSLPN+YVQ YL LRNAA
Sbjct: 61  NIESPPSMHPCKRICDITGFEAPYSDPRTNLRYASADVFKLVRSLPNDYVQRYLALRNAA 120

Query: 374 VVLR 385
           VVL+
Sbjct: 121 VVLK 124


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