BLASTX nr result

ID: Bupleurum21_contig00000354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000354
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613203.1| Ubiquitin [Medicago truncatula] gi|355514538...   158   4e-37
gb|ACJ83917.1| unknown [Medicago truncatula] gi|217075699|gb|ACJ...   158   4e-37
ref|XP_002270170.1| PREDICTED: ubiquitin-40S ribosomal protein S...   158   4e-37
ref|XP_003629895.1| Ubiquitin [Medicago truncatula] gi|355523917...   158   4e-37
emb|CAN80663.1| hypothetical protein VITISV_036195 [Vitis vinifera]   158   4e-37

>ref|XP_003613203.1| Ubiquitin [Medicago truncatula] gi|355514538|gb|AES96161.1|
           Ubiquitin [Medicago truncatula]
          Length = 155

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/101 (78%), Positives = 79/101 (78%)
 Frame = -2

Query: 304 GRTLADYNIQKESTLHLVLRLRGGGXXXXXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSG 125
           GRTLADYNIQKESTLHLVLRLRGG                      KLAVLQFYKVDDSG
Sbjct: 53  GRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSG 112

Query: 124 KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 2
           KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA
Sbjct: 113 KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>gb|ACJ83917.1| unknown [Medicago truncatula] gi|217075699|gb|ACJ86209.1| unknown
           [Medicago truncatula]
          Length = 155

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/101 (78%), Positives = 79/101 (78%)
 Frame = -2

Query: 304 GRTLADYNIQKESTLHLVLRLRGGGXXXXXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSG 125
           GRTLADYNIQKESTLHLVLRLRGG                      KLAVLQFYKVDDSG
Sbjct: 53  GRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSG 112

Query: 124 KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 2
           KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA
Sbjct: 113 KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>ref|XP_002270170.1| PREDICTED: ubiquitin-40S ribosomal protein S27a isoform 1 [Vitis
           vinifera] gi|359481049|ref|XP_003632559.1| PREDICTED:
           ubiquitin-40S ribosomal protein S27a isoform 2 [Vitis
           vinifera]
          Length = 156

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/101 (78%), Positives = 79/101 (78%)
 Frame = -2

Query: 304 GRTLADYNIQKESTLHLVLRLRGGGXXXXXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSG 125
           GRTLADYNIQKESTLHLVLRLRGG                      KLAVLQFYKVDDSG
Sbjct: 53  GRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSG 112

Query: 124 KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 2
           KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA
Sbjct: 113 KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


>ref|XP_003629895.1| Ubiquitin [Medicago truncatula] gi|355523917|gb|AET04371.1|
           Ubiquitin [Medicago truncatula]
          Length = 232

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/101 (78%), Positives = 79/101 (78%)
 Frame = -2

Query: 304 GRTLADYNIQKESTLHLVLRLRGGGXXXXXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSG 125
           GRTLADYNIQKESTLHLVLRLRGG                      KLAVLQFYKVDDSG
Sbjct: 130 GRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSG 189

Query: 124 KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 2
           KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA
Sbjct: 190 KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 230


>emb|CAN80663.1| hypothetical protein VITISV_036195 [Vitis vinifera]
          Length = 156

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/101 (78%), Positives = 79/101 (78%)
 Frame = -2

Query: 304 GRTLADYNIQKESTLHLVLRLRGGGXXXXXXXXXXXXXXXXXXXXXKLAVLQFYKVDDSG 125
           GRTLADYNIQKESTLHLVLRLRGG                      KLAVLQFYKVDDSG
Sbjct: 53  GRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSG 112

Query: 124 KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 2
           KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA
Sbjct: 113 KVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153


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