BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000338
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris...   113   1e-23
gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris...   113   1e-23
gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides]      110   9e-23
ref|XP_002321218.1| light-harvesting complex I protein Lhca3 [Po...   110   9e-23
gb|ADE42967.1| type III chlorophyll a/b binding protein [Gardeni...   107   1e-21

>gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/72 (83%), Positives = 61/72 (84%), Gaps = 8/72 (11%)
 Frame = -1

Query: 194 RQLLAGRPAQ-------SSSRKVSFVVKAASTPPVKQG-DRQLWFASKQSLSYLDGSLPG 39
           RQLL GRP Q       SSSRK SFVVKAASTPPVKQG DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 38  DYGFDPLGLSDP 3
           D+GFDPLGLSDP
Sbjct: 75  DFGFDPLGLSDP 86


>gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/72 (83%), Positives = 61/72 (84%), Gaps = 8/72 (11%)
 Frame = -1

Query: 194 RQLLAGRPAQ-------SSSRKVSFVVKAASTPPVKQG-DRQLWFASKQSLSYLDGSLPG 39
           RQLL GRP Q       SSSRK SFVVKAASTPPVKQG DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 38  DYGFDPLGLSDP 3
           D+GFDPLGLSDP
Sbjct: 75  DFGFDPLGLSDP 86


>gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 274

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/67 (82%), Positives = 60/67 (89%), Gaps = 3/67 (4%)
 Frame = -1

Query: 194 RQLLAGRPAQS---SSRKVSFVVKAASTPPVKQGDRQLWFASKQSLSYLDGSLPGDYGFD 24
           R++L  RP QS   SSRK SFVV+AASTPPVKQG+RQLWFASKQSLSYLDGSLPGD+GFD
Sbjct: 19  RKVLGARPTQSPFVSSRKSSFVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFD 78

Query: 23  PLGLSDP 3
           PLGLSDP
Sbjct: 79  PLGLSDP 85


>ref|XP_002321218.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa]
           gi|118485656|gb|ABK94678.1| unknown [Populus
           trichocarpa] gi|222861991|gb|EEE99533.1|
           light-harvesting complex I protein Lhca3 [Populus
           trichocarpa]
          Length = 274

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/67 (82%), Positives = 60/67 (89%), Gaps = 3/67 (4%)
 Frame = -1

Query: 194 RQLLAGRPAQS---SSRKVSFVVKAASTPPVKQGDRQLWFASKQSLSYLDGSLPGDYGFD 24
           R++L  RP QS   SSRK SFVV+AASTPPVKQG+RQLWFASKQSLSYLDGSLPGD+GFD
Sbjct: 19  RKVLGARPTQSPFVSSRKSSFVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFD 78

Query: 23  PLGLSDP 3
           PLGLSDP
Sbjct: 79  PLGLSDP 85


>gb|ADE42967.1| type III chlorophyll a/b binding protein [Gardenia jasminoides]
          Length = 274

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/66 (83%), Positives = 58/66 (87%), Gaps = 2/66 (3%)
 Frame = -1

Query: 194 RQLLAGRPAQSSS-RKVSFVVKAASTPPVKQG-DRQLWFASKQSLSYLDGSLPGDYGFDP 21
           RQ+L GR  QSSS RKVSF V+A +TPP KQG DRQLWFASKQSLSYLDGSLPGDYGFDP
Sbjct: 20  RQILGGRSFQSSSSRKVSFAVRAEATPPAKQGADRQLWFASKQSLSYLDGSLPGDYGFDP 79

Query: 20  LGLSDP 3
           LGLSDP
Sbjct: 80  LGLSDP 85