BLASTX nr result
ID: Bupleurum21_contig00000334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000334
(1433 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29835.3| unnamed protein product [Vitis vinifera] 382 0.0
ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi... 382 0.0
ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|2... 390 0.0
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ... 390 0.0
ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi... 395 0.0
>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 382 bits (980), Expect(2) = 0.0
Identities = 185/239 (77%), Positives = 209/239 (87%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKAL 894
IPPSRSTYNNLINACGSSGNWKEAL VCKKMT+NGVGPDLVTHNIVLSAYK G +Y K L
Sbjct: 228 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVL 287
Query: 895 SYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIH 1074
SYFE+MKGT IRPDTTTLNIVI+CLVK Q KAIDIF SM+EKRSEC PDVVTFTT+IH
Sbjct: 288 SYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIH 347
Query: 1075 LYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRP 1254
LYS+CGQ+E+ + F+TMLAEGLKPNIVSYN L+GAYA GM KEA VFN+IK+NG P
Sbjct: 348 LYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHP 407
Query: 1255 DVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
DVVSYTSLLNAYG+S +PEKA +VFE M++N+ KPNLV+YNAL+DAYGS G L EAV++
Sbjct: 408 DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEI 466
Score = 298 bits (763), Expect(2) = 0.0
Identities = 145/229 (63%), Positives = 174/229 (75%), Gaps = 3/229 (1%)
Frame = +2
Query: 41 PHQSHFLNSSFSLPSRPPNLRRKTL--CAKPNSDDTWQPKKQAS-VDYDKGTHKVSVHLS 211
PH +H S S P KTL C + S + KK+ VDYD G H+VS H+S
Sbjct: 15 PHSTH---SPHPKSSNPTFTTHKTLISCKESKSKGALEEKKKVVFVDYDNGKHQVSTHVS 71
Query: 212 GLRKEHLSKWRRLRVDGDKFQKNWAISEVVEKIMKLKHWEDIQGLLNRWAGRFARKNFPF 391
GLRK + K RLRV+ D+FQK+W++SEVVE+++KL HW+D++GLLNRW GRF+RKNFP
Sbjct: 72 GLRKADIPKHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPL 131
Query: 392 LIREMTVRGSIEHNNKVFRWMKLQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEMQEW 571
LIRE+T GS+EH+ +VFRWMK QKNYCARNDIYNMMIRLHARHN DQARGLFFEMQ+W
Sbjct: 132 LIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKW 191
Query: 572 RCKPDSETYNALISVHARAGQWRWAMNIMEDMLRAAVCNCILPSNRSLY 718
RCKPD+ETYNALI+ H RAGQWRWAMNIM+DMLRAA+ P +RS Y
Sbjct: 192 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI-----PPSRSTY 235
Score = 107 bits (267), Expect(2) = 2e-26
Identities = 67/237 (28%), Positives = 130/237 (54%)
Frame = +1
Query: 721 PSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKALSY 900
P+ +YN LI+A GS G EA+++ +M NGV P++V+ +L+A + +K S
Sbjct: 442 PNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSV 501
Query: 901 FEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLY 1080
+ I+ +TT N I + +Y KA+ ++ +MR K+ + PD VT+ +I
Sbjct: 502 LSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVK--PDPVTYNVLISGC 559
Query: 1081 SICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDV 1260
+ ++ D M+ + + Y++++ AY+ +G EA +F +K G RPDV
Sbjct: 560 CKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDV 619
Query: 1261 VSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
++YT++++AY ++ EKA+ +F M+ ++ +P+ + ++L+ A+ G A+ + L
Sbjct: 620 ITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVL 676
Score = 39.3 bits (90), Expect(2) = 2e-26
Identities = 27/97 (27%), Positives = 47/97 (48%)
Frame = +2
Query: 383 FPFLIREMTVRGSIEHNNKVFRWMKLQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEM 562
F +I +V G IE+ F M L + YN +I +A H +A +F E+
Sbjct: 342 FTTIIHLYSVCGQIENCQTAFNTM-LAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI 400
Query: 563 QEWRCKPDSETYNALISVHARAGQWRWAMNIMEDMLR 673
++ PD +Y +L++ + ++G+ AM + E M R
Sbjct: 401 KKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRR 437
Score = 114 bits (284), Expect = 8e-23
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 2/241 (0%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTD--NGVGPDLVTHNIVLSAYKSGAEYLK 888
I P +T N +I G +A+ + M + + PD+VT ++ Y +
Sbjct: 298 IRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIEN 357
Query: 889 ALSYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTM 1068
+ F M ++P+ + N +I K+A +F + K++ PDVV++T++
Sbjct: 358 CQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI--KKNGFHPDVVSYTSL 415
Query: 1069 IHLYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGL 1248
++ Y G+ E + VF+ M KPN+VSYN L+ AY +G+ EA+ + ++++ NG+
Sbjct: 416 LNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGV 475
Query: 1249 RPDVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVD 1428
+P++VS +LL A GR Q K V A + K N YN+ + +Y S G +A+
Sbjct: 476 QPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALS 535
Query: 1429 L 1431
L
Sbjct: 536 L 536
Score = 86.7 bits (213), Expect(2) = 2e-19
Identities = 59/234 (25%), Positives = 116/234 (49%)
Frame = +1
Query: 730 STYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKALSYFEI 909
+ YN+ I + S G + +AL + + M V PD VT+N+++S ++Y +AL + +
Sbjct: 515 TAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDE 574
Query: 910 MKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSIC 1089
M KI + VI K Q +A +FT M K C PDV+T+T MIH Y +
Sbjct: 575 MMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKM--KMVGCRPDVITYTAMIHAYDVA 632
Query: 1090 GQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSY 1269
E + A+F M + ++P+ ++ ++L+ A+ G + L++ ++E + + S+
Sbjct: 633 ENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSF 692
Query: 1270 TSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
+++A ++ + + + M+ + ++ N LL G +G + + L
Sbjct: 693 FEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKL 746
Score = 36.6 bits (83), Expect(2) = 2e-19
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +2
Query: 491 YNMMIRLHARHNQTDQARGLFFEMQEWRCKPDSETYNALISVHARAGQWRWAMNIMEDML 670
Y ++ + + + ++A +F M+ CKP+ +YNALI + G A+ I+ +M
Sbjct: 412 YTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEME 471
Query: 671 RAAV 682
R V
Sbjct: 472 RNGV 475
Score = 84.3 bits (207), Expect = 7e-14
Identities = 50/161 (31%), Positives = 81/161 (50%)
Frame = +1
Query: 949 NIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSICGQVEDSKAVFDTM 1128
N++I + +A +F M++ R C PD T+ +I+ + GQ + + D M
Sbjct: 166 NMMIRLHARHNIVDQARGLFFEMQKWR--CKPDAETYNALINAHGRAGQWRWAMNIMDDM 223
Query: 1129 LAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSLLNAYGRSQQP 1308
L + P+ +YN L+ A G KEAL V + ENG+ PD+V++ +L+AY R Q
Sbjct: 224 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQY 283
Query: 1309 EKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
K FE MK N +P+ T N ++ G +A+D+
Sbjct: 284 SKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDI 324
Score = 67.8 bits (164), Expect(2) = 2e-13
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 38/264 (14%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKAL 894
IP S+ Y+++I A G EA + KM G PD++T+ ++ AY + KA
Sbjct: 580 IPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKAS 639
Query: 895 SYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKR------------SEC 1038
+ F M+ ++PD+ + ++ K Q K + + MREK+ S C
Sbjct: 640 ALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSAC 699
Query: 1039 ----------------DPDVVT-----FTTMIHLYSICGQVEDSKAVFDTMLAEGLKPNI 1155
+P + ++H G++E +F ++A G + N
Sbjct: 700 SLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINF 759
Query: 1156 VSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSLLN-AYGRSQQPEKAT--EV 1326
+Y+ LL G ++ + V ++E GL+P V Y S+ + A RS A E
Sbjct: 760 YTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQNRSGAEYAAVIQER 819
Query: 1327 FEAMKKN--NWKPNLVTYNALLDA 1392
E++K+N N P ++LL A
Sbjct: 820 IESLKRNSRNQNPTKKLNDSLLPA 843
Score = 35.4 bits (80), Expect(2) = 2e-13
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 491 YNMMIRLHARHNQTDQARGLFFEMQEWRCKPDSETYNALISVHARAGQWRWAMNIMEDML 670
YN I + + D+A L+ M+ + KPD TYN LIS + ++ A+ +++M+
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Score = 66.2 bits (160), Expect = 2e-08
Identities = 38/148 (25%), Positives = 79/148 (53%)
Frame = +1
Query: 952 IVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSICGQVEDSKAVFDTML 1131
++I + + + ++ +F M+ +++ C + + + MI L++ V+ ++ +F M
Sbjct: 131 LLIREITQIGSLEHSVQVFRWMKNQKNYCARNDI-YNMMIRLHARHNIVDQARGLFFEMQ 189
Query: 1132 AEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSLLNAYGRSQQPE 1311
KP+ +YN L+ A+ G + A+ + +D+ + P +Y +L+NA G S +
Sbjct: 190 KWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 249
Query: 1312 KATEVFEAMKKNNWKPNLVTYNALLDAY 1395
+A V + M +N P+LVT+N +L AY
Sbjct: 250 EALNVCKKMTENGVGPDLVTHNIVLSAY 277
>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
[Vitis vinifera]
Length = 848
Score = 382 bits (980), Expect(2) = 0.0
Identities = 185/239 (77%), Positives = 209/239 (87%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKAL 894
IPPSRSTYNNLINACGSSGNWKEAL VCKKMT+NGVGPDLVTHNIVLSAYK G +Y K L
Sbjct: 228 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVL 287
Query: 895 SYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIH 1074
SYFE+MKGT IRPDTTTLNIVI+CLVK Q KAIDIF SM+EKRSEC PDVVTFTT+IH
Sbjct: 288 SYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIH 347
Query: 1075 LYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRP 1254
LYS+CGQ+E+ + F+TMLAEGLKPNIVSYN L+GAYA GM KEA VFN+IK+NG P
Sbjct: 348 LYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHP 407
Query: 1255 DVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
DVVSYTSLLNAYG+S +PEKA +VFE M++N+ KPNLV+YNAL+DAYGS G L EAV++
Sbjct: 408 DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEI 466
Score = 298 bits (763), Expect(2) = 0.0
Identities = 145/229 (63%), Positives = 174/229 (75%), Gaps = 3/229 (1%)
Frame = +2
Query: 41 PHQSHFLNSSFSLPSRPPNLRRKTL--CAKPNSDDTWQPKKQAS-VDYDKGTHKVSVHLS 211
PH +H S S P KTL C + S + KK+ VDYD G H+VS H+S
Sbjct: 15 PHSTH---SPHPKSSNPTFTTHKTLISCKESKSKGALEEKKKVVFVDYDNGKHQVSTHVS 71
Query: 212 GLRKEHLSKWRRLRVDGDKFQKNWAISEVVEKIMKLKHWEDIQGLLNRWAGRFARKNFPF 391
GLRK + K RLRV+ D+FQK+W++SEVVE+++KL HW+D++GLLNRW GRF+RKNFP
Sbjct: 72 GLRKADIPKHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPL 131
Query: 392 LIREMTVRGSIEHNNKVFRWMKLQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEMQEW 571
LIRE+T GS+EH+ +VFRWMK QKNYCARNDIYNMMIRLHARHN DQARGLFFEMQ+W
Sbjct: 132 LIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKW 191
Query: 572 RCKPDSETYNALISVHARAGQWRWAMNIMEDMLRAAVCNCILPSNRSLY 718
RCKPD+ETYNALI+ H RAGQWRWAMNIM+DMLRAA+ P +RS Y
Sbjct: 192 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI-----PPSRSTY 235
Score = 107 bits (267), Expect(2) = 2e-26
Identities = 67/237 (28%), Positives = 130/237 (54%)
Frame = +1
Query: 721 PSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKALSY 900
P+ +YN LI+A GS G EA+++ +M NGV P++V+ +L+A + +K S
Sbjct: 442 PNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSV 501
Query: 901 FEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLY 1080
+ I+ +TT N I + +Y KA+ ++ +MR K+ + PD VT+ +I
Sbjct: 502 LSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVK--PDPVTYNVLISGC 559
Query: 1081 SICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDV 1260
+ ++ D M+ + + Y++++ AY+ +G EA +F +K G RPDV
Sbjct: 560 CKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDV 619
Query: 1261 VSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
++YT++++AY ++ EKA+ +F M+ ++ +P+ + ++L+ A+ G A+ + L
Sbjct: 620 ITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVL 676
Score = 39.3 bits (90), Expect(2) = 2e-26
Identities = 27/97 (27%), Positives = 47/97 (48%)
Frame = +2
Query: 383 FPFLIREMTVRGSIEHNNKVFRWMKLQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEM 562
F +I +V G IE+ F M L + YN +I +A H +A +F E+
Sbjct: 342 FTTIIHLYSVCGQIENCQTAFNTM-LAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI 400
Query: 563 QEWRCKPDSETYNALISVHARAGQWRWAMNIMEDMLR 673
++ PD +Y +L++ + ++G+ AM + E M R
Sbjct: 401 KKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRR 437
Score = 114 bits (284), Expect = 8e-23
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 2/241 (0%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTD--NGVGPDLVTHNIVLSAYKSGAEYLK 888
I P +T N +I G +A+ + M + + PD+VT ++ Y +
Sbjct: 298 IRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIEN 357
Query: 889 ALSYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTM 1068
+ F M ++P+ + N +I K+A +F + K++ PDVV++T++
Sbjct: 358 CQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI--KKNGFHPDVVSYTSL 415
Query: 1069 IHLYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGL 1248
++ Y G+ E + VF+ M KPN+VSYN L+ AY +G+ EA+ + ++++ NG+
Sbjct: 416 LNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGV 475
Query: 1249 RPDVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVD 1428
+P++VS +LL A GR Q K V A + K N YN+ + +Y S G +A+
Sbjct: 476 QPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALS 535
Query: 1429 L 1431
L
Sbjct: 536 L 536
Score = 86.7 bits (213), Expect(2) = 2e-19
Identities = 59/234 (25%), Positives = 116/234 (49%)
Frame = +1
Query: 730 STYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKALSYFEI 909
+ YN+ I + S G + +AL + + M V PD VT+N+++S ++Y +AL + +
Sbjct: 515 TAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDE 574
Query: 910 MKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSIC 1089
M KI + VI K Q +A +FT M K C PDV+T+T MIH Y +
Sbjct: 575 MMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKM--KMVGCRPDVITYTAMIHAYDVA 632
Query: 1090 GQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSY 1269
E + A+F M + ++P+ ++ ++L+ A+ G + L++ ++E + + S+
Sbjct: 633 ENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSF 692
Query: 1270 TSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
+++A ++ + + + M+ + ++ N LL G +G + + L
Sbjct: 693 FEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKL 746
Score = 36.6 bits (83), Expect(2) = 2e-19
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +2
Query: 491 YNMMIRLHARHNQTDQARGLFFEMQEWRCKPDSETYNALISVHARAGQWRWAMNIMEDML 670
Y ++ + + + ++A +F M+ CKP+ +YNALI + G A+ I+ +M
Sbjct: 412 YTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEME 471
Query: 671 RAAV 682
R V
Sbjct: 472 RNGV 475
Score = 84.3 bits (207), Expect = 7e-14
Identities = 50/161 (31%), Positives = 81/161 (50%)
Frame = +1
Query: 949 NIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSICGQVEDSKAVFDTM 1128
N++I + +A +F M++ R C PD T+ +I+ + GQ + + D M
Sbjct: 166 NMMIRLHARHNIVDQARGLFFEMQKWR--CKPDAETYNALINAHGRAGQWRWAMNIMDDM 223
Query: 1129 LAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSLLNAYGRSQQP 1308
L + P+ +YN L+ A G KEAL V + ENG+ PD+V++ +L+AY R Q
Sbjct: 224 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQY 283
Query: 1309 EKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
K FE MK N +P+ T N ++ G +A+D+
Sbjct: 284 SKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDI 324
Score = 63.9 bits (154), Expect(2) = 3e-12
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKAL 894
IP S+ Y+++I A G EA + KM G PD++T+ ++ AY + KA
Sbjct: 580 IPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKAS 639
Query: 895 SYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKR------------SEC 1038
+ F M+ ++PD+ + ++ K Q K + + MREK+ S C
Sbjct: 640 ALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSAC 699
Query: 1039 ----------------DPDVVT-----FTTMIHLYSICGQVEDSKAVFDTMLAEGLKPNI 1155
+P + ++H G++E +F ++A G + N
Sbjct: 700 SLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINF 759
Query: 1156 VSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSL 1278
+Y+ LL G ++ + V ++E GL+P V Y S+
Sbjct: 760 YTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSI 800
Score = 35.4 bits (80), Expect(2) = 3e-12
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 491 YNMMIRLHARHNQTDQARGLFFEMQEWRCKPDSETYNALISVHARAGQWRWAMNIMEDML 670
YN I + + D+A L+ M+ + KPD TYN LIS + ++ A+ +++M+
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Score = 66.2 bits (160), Expect = 2e-08
Identities = 38/148 (25%), Positives = 79/148 (53%)
Frame = +1
Query: 952 IVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSICGQVEDSKAVFDTML 1131
++I + + + ++ +F M+ +++ C + + + MI L++ V+ ++ +F M
Sbjct: 131 LLIREITQIGSLEHSVQVFRWMKNQKNYCARNDI-YNMMIRLHARHNIVDQARGLFFEMQ 189
Query: 1132 AEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSLLNAYGRSQQPE 1311
KP+ +YN L+ A+ G + A+ + +D+ + P +Y +L+NA G S +
Sbjct: 190 KWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 249
Query: 1312 KATEVFEAMKKNNWKPNLVTYNALLDAY 1395
+A V + M +N P+LVT+N +L AY
Sbjct: 250 EALNVCKKMTENGVGPDLVTHNIVLSAY 277
>ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|222854915|gb|EEE92462.1|
predicted protein [Populus trichocarpa]
Length = 786
Score = 390 bits (1003), Expect(2) = 0.0
Identities = 187/239 (78%), Positives = 218/239 (91%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKAL 894
IPPSRSTYNNLINACGSSGNW+EALK+CKKMT+NGVGPDLVTHNI+LSAYK+GA+Y KAL
Sbjct: 201 IPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKAL 260
Query: 895 SYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIH 1074
SYFE+MKGT IRPDTTTLNI+I+CL K QY+KAI IF SMREKR+EC PDVVTFT++IH
Sbjct: 261 SYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIH 320
Query: 1075 LYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRP 1254
LYS+ GQ+E+ +AVF TM+AEGLKPNIVSYNTL+GAYA GM+KEAL VFN IK +GLRP
Sbjct: 321 LYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRP 380
Query: 1255 DVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
DVVSYTSLLN+YGRSQQP+KA EVFE MK++ KPN+V+YNA++DAYGSNG LAEAV++
Sbjct: 381 DVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEV 439
Score = 286 bits (732), Expect(2) = 0.0
Identities = 133/211 (63%), Positives = 166/211 (78%), Gaps = 1/211 (0%)
Frame = +2
Query: 89 PPNLRRKTLCAKPNSDDTWQPKKQASVDYDKGTHKVSVHLSGLRKEHLSKWRRLRVDGDK 268
PP + K LC SD ++ KK VDYDKG H VS +SG+RK+ + + R+RV GD+
Sbjct: 3 PPAFKPKILCKNSKSDAAFEEKKSGFVDYDKGIHHVSTQVSGIRKDQIPQRYRIRVQGDR 62
Query: 269 FQKNWAISEVVEKIMKLKHW-EDIQGLLNRWAGRFARKNFPFLIREMTVRGSIEHNNKVF 445
FQK+W++S+VV+K+++L H +D++GLLNRW GRFARKNFP LI+E+T +GSIEH+ VF
Sbjct: 63 FQKDWSVSQVVQKVLELDHKSDDVEGLLNRWVGRFARKNFPLLIKEITQKGSIEHSILVF 122
Query: 446 RWMKLQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEMQEWRCKPDSETYNALISVHAR 625
RWMK Q+NYCAR DIYNMMIRLHARHN TDQARGLFFEMQ+WRCKPD+ET NALI+ H R
Sbjct: 123 RWMKNQRNYCARTDIYNMMIRLHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGR 182
Query: 626 AGQWRWAMNIMEDMLRAAVCNCILPSNRSLY 718
+GQWRWAMNIMEDML+ A+ P +RS Y
Sbjct: 183 SGQWRWAMNIMEDMLQKAI-----PPSRSTY 208
Score = 85.1 bits (209), Expect(2) = 3e-19
Identities = 52/245 (21%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVT------------------ 840
+ P+ +YN +I+A GS+G EA++V ++M +G+ P+ V+
Sbjct: 413 LKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNID 472
Query: 841 -----------------HNIVLSAYKSGAEYLKALSYFEIMKGTKIRPDTTTLNIVIHCL 969
+N + +Y + E+ KA S + M+ +K+ PD T ++I
Sbjct: 473 VVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGC 532
Query: 970 VKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSICGQVEDSKAVFDTMLAEGLKP 1149
K +Y +A++ + M + + + + G++ +++++F+ M G P
Sbjct: 533 CKMTKYCEALEFLSEMMDLKIPMTKEAYS----------SGKITEAESMFNKMKMAGCSP 582
Query: 1150 NIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSLLNAYGRSQQPEKATEVF 1329
++V+Y +L AY K+A + +++E ++PD ++ ++L+ A+ + P K +
Sbjct: 583 DVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGGDPSKVLILA 642
Query: 1330 EAMKK 1344
E M++
Sbjct: 643 EFMRE 647
Score = 37.7 bits (86), Expect(2) = 3e-19
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +2
Query: 383 FPFLIREMTVRGSIEHNNKVFRWMK---LQKNYCARNDIYNMMIRLHARHNQTDQARGLF 553
F +I +V G IE+ VF M L+ N + YN ++ +A H +A +F
Sbjct: 315 FTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVS----YNTLMGAYASHGMNKEALSVF 370
Query: 554 FEMQEWRCKPDSETYNALISVHARAGQWRWAMNIMEDMLR 673
++ +PD +Y +L++ + R+ Q + A + E M R
Sbjct: 371 NAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKR 410
Score = 93.6 bits (231), Expect(2) = 8e-19
Identities = 72/315 (22%), Positives = 139/315 (44%), Gaps = 61/315 (19%)
Frame = +1
Query: 646 YEYYGRHASCRCV*LHSSL*SIFIPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVG 825
Y G+ +CR V S++ + + P+ +YN L+ A S G KEAL V + ++G+
Sbjct: 322 YSVNGQIENCRAV--FSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLR 379
Query: 826 PDLVTHNIVLSAYKSGAEYLKALSYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDI 1005
PD+V++ +L++Y + KA FE+MK K++P+ + N +I + +A+++
Sbjct: 380 PDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEV 439
Query: 1006 FTSMRE---------------------------------KRSECDPDVVTFTTMIHLYSI 1086
M + +R + + + + I Y
Sbjct: 440 LREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMN 499
Query: 1087 CGQVEDSKAVFDTMLAEGLKPNIVSYNTLLG----------------------------A 1182
G+ E + +++ +M + P+ V++ L+ A
Sbjct: 500 VGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEA 559
Query: 1183 YALRGMSKEALLVFNDIKENGLRPDVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPN 1362
Y+ G EA +FN +K G PDVV+YT +L+AY ++ +KA + + M++ N +P+
Sbjct: 560 YS-SGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPD 618
Query: 1363 LVTYNALLDAYGSNG 1407
+ +AL+ A+ G
Sbjct: 619 TIACSALMRAFNKGG 633
Score = 27.7 bits (60), Expect(2) = 8e-19
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 491 YNMMIRLHARHNQTDQARGLFFEMQEWRCKPDSETYNALISVHARAGQWRWAMNIMEDM 667
+N+++ + Q +A F M+ +PD+ T N +I + GQ+ A+ I + M
Sbjct: 243 HNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSM 301
Score = 77.4 bits (189), Expect = 9e-12
Identities = 47/165 (28%), Positives = 81/165 (49%)
Frame = +1
Query: 937 TTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSICGQVEDSKAV 1116
T N++I + +A +F M++ R C PD T +I+ + GQ + +
Sbjct: 135 TDIYNMMIRLHARHNWTDQARGLFFEMQKWR--CKPDAETCNALINAHGRSGQWRWAMNI 192
Query: 1117 FDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSLLNAYGR 1296
+ ML + + P+ +YN L+ A G +EAL + + ENG+ PD+V++ +L+AY
Sbjct: 193 MEDMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKT 252
Query: 1297 SQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
Q KA FE MK N +P+ T N ++ G +A+ +
Sbjct: 253 GAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGI 297
Score = 58.2 bits (139), Expect = 5e-06
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 3/233 (1%)
Frame = +1
Query: 673 CRCV*LHSSL*SIFIPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIV 852
C + S + + IP ++ Y SSG EA + KM G PD+VT+ ++
Sbjct: 539 CEALEFLSEMMDLKIPMTKEAY--------SSGKITEAESMFNKMKMAGCSPDVVTYTMM 590
Query: 853 LSAYKSGAEYLKALSYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRS 1032
L AY + + KA + + M+ I+PDT + ++ K K + + MREK
Sbjct: 591 LHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGGDPSKVLILAEFMREKEI 650
Query: 1033 ECDPDVVTFTTMIHLYSICGQVEDSKAVFDTMLAEGLKPNIVS---YNTLLGAYALRGMS 1203
D + F + S C + D + + + ++VS N LL G
Sbjct: 651 PLS-DAIFF----EMVSACSLLRDWRTTIELIKLMESSFSVVSIGLLNQLLHLLGKSGKI 705
Query: 1204 KEALLVFNDIKENGLRPDVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPN 1362
+ + +F I +G + +Y+ LL K EV E M++ +P+
Sbjct: 706 ESMMKLFYKIIGSGAEINCNTYSILLKNLLAVGNWRKYIEVLEWMEEARVQPS 758
>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 855
Score = 390 bits (1001), Expect(2) = 0.0
Identities = 182/239 (76%), Positives = 215/239 (89%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKAL 894
IPPSRSTYNNLINACGSSGNWKEAL VCKKMTDNGVGPDLVTHNI+L+A+KSG +Y KAL
Sbjct: 216 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKAL 275
Query: 895 SYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIH 1074
SYFE++KGT IRPDTTT NI+IHCLVK +QY KA+DIF SM+EK+SEC PDVVTFT+MIH
Sbjct: 276 SYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIH 335
Query: 1075 LYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRP 1254
LYS+CG +E+ +A F+ MLAEGLKPNIVSYN LLGAYA RGM EAL VFN+IK+NG RP
Sbjct: 336 LYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRP 395
Query: 1255 DVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
DVVSYTSLLNAYGRS++P+KA E+F+ +K+NN KPN+V+YNAL+DAYGSNG L +A+++
Sbjct: 396 DVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEI 454
Score = 283 bits (724), Expect(2) = 0.0
Identities = 138/212 (65%), Positives = 166/212 (78%)
Frame = +2
Query: 83 SRPPNLRRKTLCAKPNSDDTWQPKKQASVDYDKGTHKVSVHLSGLRKEHLSKWRRLRVDG 262
+RPP + T K +++ ++ KK VDYD+G H+VS +SGLRKE + RLRV G
Sbjct: 19 TRPP--KSTTTRKKSSNEVAFKEKKDGFVDYDRGHHQVSTKISGLRKEDIPAHYRLRVAG 76
Query: 263 DKFQKNWAISEVVEKIMKLKHWEDIQGLLNRWAGRFARKNFPFLIREMTVRGSIEHNNKV 442
++FQK+W +SEVV+ ++ L +DI+GLLNRW GRFARKNFPFLIRE+T RGSIEH N V
Sbjct: 77 NRFQKDWTVSEVVDSVLSLTLRDDIEGLLNRWIGRFARKNFPFLIRELTQRGSIEHCNLV 136
Query: 443 FRWMKLQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEMQEWRCKPDSETYNALISVHA 622
F WMK QKNYCAR DIYNMMIRLHARHN+TDQARGLFFEMQ+ RCKPD+ETYNALI+ H
Sbjct: 137 FSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHG 196
Query: 623 RAGQWRWAMNIMEDMLRAAVCNCILPSNRSLY 718
RAGQWRWAMNIM+DMLRAA+ P +RS Y
Sbjct: 197 RAGQWRWAMNIMDDMLRAAI-----PPSRSTY 223
Score = 99.0 bits (245), Expect(2) = 8e-20
Identities = 62/228 (27%), Positives = 115/228 (50%)
Frame = +1
Query: 742 NLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKALSYFEIMKGT 921
+L + CG N + A + M G+ P++V++N +L AY + +AL F +K
Sbjct: 335 HLYSVCGHIENCEAAFNM---MLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQN 391
Query: 922 KIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSICGQVE 1101
RPD + +++ +SR+ +KA +IF + KR+ P++V++ +I Y G +E
Sbjct: 392 GFRPDVVSYTSLLNAYGRSRKPQKAREIFKMI--KRNNLKPNIVSYNALIDAYGSNGLLE 449
Query: 1102 DSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSLL 1281
D+ + M + + PN+VS TLL A G + V + + G++ + V+Y S +
Sbjct: 450 DAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAI 509
Query: 1282 NAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAV 1425
+Y + +KA +++ +M+K K + VTY L+ EA+
Sbjct: 510 GSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEAL 557
Score = 25.8 bits (55), Expect(2) = 8e-20
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +2
Query: 491 YNMMIRLHARHNQTDQARGLFFEMQEWRCKPDSETYNALISVHARAGQWRWAMNIMEDM 667
+N+M+ Q +A F ++ +PD+ T+N +I + Q+ A++I M
Sbjct: 258 HNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSM 316
Score = 101 bits (252), Expect = 4e-19
Identities = 67/243 (27%), Positives = 131/243 (53%), Gaps = 4/243 (1%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKAL 894
+ P+ +YN LI+A GS+G ++A+++ ++M + + P++V+ +L+A + +K
Sbjct: 428 LKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKID 487
Query: 895 SYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIH 1074
+ + I+ +T N I + +Y KAID++ SMR+K+ + D VT+T +I
Sbjct: 488 TVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDS--VTYTVLIS 545
Query: 1075 LYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALR----GMSKEALLVFNDIKEN 1242
+ ++ + + M+ L + Y++++ AY+ + G EA FN +K
Sbjct: 546 GCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSL 605
Query: 1243 GLRPDVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEA 1422
G PDVV+YT++L+AY +++ EK +FE M++N+ K + + AL+ A+ G
Sbjct: 606 GCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRV 665
Query: 1423 VDL 1431
+ L
Sbjct: 666 LSL 668
Score = 78.6 bits (192), Expect = 4e-12
Identities = 47/165 (28%), Positives = 82/165 (49%)
Frame = +1
Query: 937 TTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSICGQVEDSKAV 1116
T N++I + + +A +F M++ R C PD T+ +I+ + GQ + +
Sbjct: 150 TDIYNMMIRLHARHNRTDQARGLFFEMQKCR--CKPDAETYNALINAHGRAGQWRWAMNI 207
Query: 1117 FDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSLLNAYGR 1296
D ML + P+ +YN L+ A G KEAL V + +NG+ PD+V++ +L A+
Sbjct: 208 MDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKS 267
Query: 1297 SQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
Q KA FE +K + +P+ T+N ++ +AVD+
Sbjct: 268 GTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDI 312
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Frame = +1
Query: 706 SIFIPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYL 885
S+ P TY +++A ++ W++ + ++M +N V D + ++ A+ G +
Sbjct: 604 SLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPG 663
Query: 886 KALSYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTT 1065
+ LS + M+ I T ++ +K A+D+ M P + +
Sbjct: 664 RVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYMEPSL----PVISSGCL 719
Query: 1066 MIHLYSI--CGQVEDSKAVFDTMLAEGLKPNIVSYNTLL 1176
+ L S+ G++E +F MLA G + N +Y+ LL
Sbjct: 720 NLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILL 758
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +2
Query: 491 YNMMIRLHARHNQTDQARGLFFEMQEWRCKPDSETYNALISVHARAGQWRWAMNIMEDML 670
YN I + + D+A L+ M++ + K DS TY LIS + ++ A++ ME+M+
Sbjct: 505 YNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMM 564
Query: 671 RAAVCNCILPSNRSLY 718
LP ++ +Y
Sbjct: 565 HLK-----LPMSKEVY 575
>ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
[Glycine max]
Length = 832
Score = 395 bits (1014), Expect(2) = 0.0
Identities = 187/239 (78%), Positives = 215/239 (89%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKAL 894
IPPSRSTYNNLINACGSSGNWKEAL VCKKMT+NGVGPDLVTHNI+LSA+KSGA+Y KAL
Sbjct: 217 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKAL 276
Query: 895 SYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIH 1074
SYFE+MKGT IRPDTTTLNIVIHCLVK RQY KAI+IF SMREK+SEC PDVVTFT++IH
Sbjct: 277 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIH 336
Query: 1075 LYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRP 1254
LYS+CGQVE+ +A F+ M+AEGLKPNIVSYN L+GAYA RGM EA L FN+IK+NG RP
Sbjct: 337 LYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRP 396
Query: 1255 DVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
D+VSYTSLLNAYGRSQ+P KA ++F+ MK+N KPNLV+YNAL+DAYGSNG LA+A+ +
Sbjct: 397 DIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKI 455
Score = 275 bits (703), Expect(2) = 0.0
Identities = 131/203 (64%), Positives = 159/203 (78%), Gaps = 2/203 (0%)
Frame = +2
Query: 116 CAKPNSDDTWQPKKQASVDYDKGTHKVSVHLSGLRKEHLSKWRRLRVDGDKFQKNWAISE 295
C K + ++ K+ VDYD+G H+VS +SGLRK+ ++ RLRV G++FQ +W +SE
Sbjct: 27 CKKKSDKLAFKETKEGFVDYDRGQHEVSTKISGLRKDDIAARYRLRVAGNRFQMDWTVSE 86
Query: 296 VVEKIMKLK--HWEDIQGLLNRWAGRFARKNFPFLIREMTVRGSIEHNNKVFRWMKLQKN 469
V E ++ L +D+ GLLNRW GRFARKNFPFLI+E+T RGSIEH N+VFRW+K QKN
Sbjct: 87 VAELVLSLNLSDDDDVDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNRVFRWLKNQKN 146
Query: 470 YCARNDIYNMMIRLHARHNQTDQARGLFFEMQEWRCKPDSETYNALISVHARAGQWRWAM 649
Y ARNDIYNMMIRLHARHN+TDQARGLFFEMQEWRCKPD ETYNA+I+ H RAGQWRWAM
Sbjct: 147 YRARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAM 206
Query: 650 NIMEDMLRAAVCNCILPSNRSLY 718
NIM+DMLRAA+ P +RS Y
Sbjct: 207 NIMDDMLRAAI-----PPSRSTY 224
Score = 103 bits (256), Expect = 1e-19
Identities = 66/239 (27%), Positives = 128/239 (53%)
Frame = +1
Query: 715 IPPSRSTYNNLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKAL 894
+ P+ +YN LI+A GS+G +A+K+ ++M G+ P++V+ +L+A + +K
Sbjct: 429 LKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKID 488
Query: 895 SYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIH 1074
+ + I+ +T N I + +Y KAI ++ SMR+K+ + D VT+T +I
Sbjct: 489 TVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDS--VTYTVLIS 546
Query: 1075 LYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRP 1254
+ ++ + + ++ L + Y++ + AY+ +G EA FN +K +G P
Sbjct: 547 GCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYP 606
Query: 1255 DVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAVDL 1431
DVV+YT++L+AY ++ EKA +FE M+ ++ K + + AL+ ++ G + L
Sbjct: 607 DVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSL 665
Score = 87.8 bits (216), Expect = 6e-15
Identities = 58/228 (25%), Positives = 112/228 (49%)
Frame = +1
Query: 742 NLINACGSSGNWKEALKVCKKMTDNGVGPDLVTHNIVLSAYKSGAEYLKALSYFEIMKGT 921
+L + CG N + A + M G+ P++V++N ++ AY + +A +F +K
Sbjct: 336 HLYSVCGQVENCEAAFNM---MIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQN 392
Query: 922 KIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTTMIHLYSICGQVE 1101
RPD + +++ +S++ KA IF M KR++ P++V++ +I Y G +
Sbjct: 393 GFRPDIVSYTSLLNAYGRSQKPHKARQIFDRM--KRNKLKPNLVSYNALIDAYGSNGLLA 450
Query: 1102 DSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENGLRPDVVSYTSLL 1281
D+ + M EG++PN+VS TLL A + V + G++ + V+Y + +
Sbjct: 451 DAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAI 510
Query: 1282 NAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLAEAV 1425
+ + +KA ++++M+K K + VTY L+ EA+
Sbjct: 511 GSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEAL 558
Score = 80.9 bits (198), Expect = 8e-13
Identities = 50/167 (29%), Positives = 84/167 (50%)
Frame = +1
Query: 886 KALSYFEIMKGTKIRPDTTTLNIVIHCLVKSRQYKKAIDIFTSMREKRSECDPDVVTFTT 1065
+ + + K + R D + I +H + + +A +F M+E R C PDV T+
Sbjct: 136 RVFRWLKNQKNYRARNDIYNMMIRLHA--RHNRTDQARGLFFEMQEWR--CKPDVETYNA 191
Query: 1066 MIHLYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIKENG 1245
+I+ + GQ + + D ML + P+ +YN L+ A G KEAL V + ENG
Sbjct: 192 IINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENG 251
Query: 1246 LRPDVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALL 1386
+ PD+V++ +L+A+ Q KA FE MK + +P+ T N ++
Sbjct: 252 VGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVI 298
Score = 63.9 bits (154), Expect = 1e-07
Identities = 33/123 (26%), Positives = 67/123 (54%)
Frame = +1
Query: 1057 FTTMIHLYSICGQVEDSKAVFDTMLAEGLKPNIVSYNTLLGAYALRGMSKEALLVFNDIK 1236
+ MI L++ + + ++ +F M KP++ +YN ++ A+ G + A+ + +D+
Sbjct: 154 YNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDML 213
Query: 1237 ENGLRPDVVSYTSLLNAYGRSQQPEKATEVFEAMKKNNWKPNLVTYNALLDAYGSNGHLA 1416
+ P +Y +L+NA G S ++A V + M +N P+LVT+N +L A+ S +
Sbjct: 214 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYS 273
Query: 1417 EAV 1425
+A+
Sbjct: 274 KAL 276