BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000333
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Popu...    86   2e-15
gb|ABK95239.1| unknown [Populus trichocarpa]                           86   2e-15
ref|NP_175633.1| photosystem I reaction center subunit VI-2 [Ara...    84   2e-14
sp|O04006.1|PSAH_BRARA RecName: Full=Photosystem I reaction cent...    84   2e-14
ref|XP_002516025.1| Photosystem I reaction center subunit VI, ch...    83   2e-14

>ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Populus trichocarpa]
           gi|118487059|gb|ABK95360.1| unknown [Populus
           trichocarpa] gi|222841638|gb|EEE79185.1| hypothetical
           protein POPTRDRAFT_712066 [Populus trichocarpa]
          Length = 144

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/70 (74%), Positives = 59/70 (84%), Gaps = 4/70 (5%)
 Frame = -1

Query: 199 MASLATSFSAVQP--IKGLGGRSSLAGTKLYIKPSFKPTKFKA--GGAVVAKYGDKSVYF 32
           MASLAT F+AVQP  IKGLGG SSL+GTKL++KPS +  + K+   GAVVAKYGDKSVYF
Sbjct: 1   MASLAT-FAAVQPATIKGLGG-SSLSGTKLHVKPSRQGLRPKSLRSGAVVAKYGDKSVYF 58

Query: 31  DLEDLGNTTG 2
           DLEDLGNTTG
Sbjct: 59  DLEDLGNTTG 68


>gb|ABK95239.1| unknown [Populus trichocarpa]
          Length = 86

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/70 (74%), Positives = 59/70 (84%), Gaps = 4/70 (5%)
 Frame = -1

Query: 199 MASLATSFSAVQP--IKGLGGRSSLAGTKLYIKPSFKPTKFKA--GGAVVAKYGDKSVYF 32
           MASLAT F+AVQP  IKGLGG SSL+GTKL++KPS +  + K+   GAVVAKYGDKSVYF
Sbjct: 1   MASLAT-FAAVQPATIKGLGG-SSLSGTKLHVKPSRQGLRPKSLRSGAVVAKYGDKSVYF 58

Query: 31  DLEDLGNTTG 2
           DLEDLGNTTG
Sbjct: 59  DLEDLGNTTG 68


>ref|NP_175633.1| photosystem I reaction center subunit VI-2 [Arabidopsis thaliana]
           gi|17369623|sp|Q9SUI6.1|PSAH2_ARATH RecName:
           Full=Photosystem I reaction center subunit VI-2,
           chloroplastic; AltName: Full=PSI-H1; Flags: Precursor
           gi|6850347|gb|AAF29410.1|AC022354_9 photosystem I
           subunit VI precursor [Arabidopsis thaliana]
           gi|14326518|gb|AAK60304.1|AF385712_1 At1g52230/F9I5_11
           [Arabidopsis thaliana] gi|5734524|emb|CAB52750.1|
           photosystem I subunit VI precursor [Arabidopsis
           thaliana] gi|21553440|gb|AAM62533.1| Photosystem I
           reaction center subunit VI-2, chloroplast precursor
           (PSI-H1) [Arabidopsis thaliana]
           gi|22137304|gb|AAM91497.1| At1g52230/F9I5_11
           [Arabidopsis thaliana] gi|332194651|gb|AEE32772.1|
           photosystem I reaction center subunit VI-2 [Arabidopsis
           thaliana]
          Length = 145

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/71 (71%), Positives = 56/71 (78%), Gaps = 5/71 (7%)
 Frame = -1

Query: 199 MASLATSFSAVQP---IKGLGGRSSLAGTKLYIKPSFKPTKFKA--GGAVVAKYGDKSVY 35
           MAS AT  +AVQP   +KGLGG SSLAG KL+IKPS +  K K+   GAVVAKYGDKSVY
Sbjct: 1   MASFAT-IAAVQPSAAVKGLGG-SSLAGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVY 58

Query: 34  FDLEDLGNTTG 2
           FDLEDLGNTTG
Sbjct: 59  FDLEDLGNTTG 69


>sp|O04006.1|PSAH_BRARA RecName: Full=Photosystem I reaction center subunit VI,
           chloroplastic; Short=PSI-H; AltName:
           Full=Light-harvesting complex I 11 kDa protein; Flags:
           Precursor gi|1916350|gb|AAB51159.1| PSI-H subunit
           [Brassica rapa]
          Length = 145

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 52/72 (72%), Positives = 56/72 (77%), Gaps = 6/72 (8%)
 Frame = -1

Query: 199 MASLATSFSAVQP---IKGLGGRSSLAGTKLYIKPS---FKPTKFKAGGAVVAKYGDKSV 38
           MAS AT  +AVQP   +KGLGG SSL G KL+IKPS   FKP   +AG AVVAKYGDKSV
Sbjct: 1   MASFAT-IAAVQPYSAVKGLGG-SSLTGAKLFIKPSRQSFKPKSTRAG-AVVAKYGDKSV 57

Query: 37  YFDLEDLGNTTG 2
           YFDLEDLGNTTG
Sbjct: 58  YFDLEDLGNTTG 69


>ref|XP_002516025.1| Photosystem I reaction center subunit VI, chloroplast precursor,
           putative [Ricinus communis] gi|223544930|gb|EEF46445.1|
           Photosystem I reaction center subunit VI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 144

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 50/70 (71%), Positives = 56/70 (80%), Gaps = 4/70 (5%)
 Frame = -1

Query: 199 MASLATSFSAVQP--IKGLGGRSSLAGTKLYIKPSFKPT--KFKAGGAVVAKYGDKSVYF 32
           MASLAT F+AVQP  +KGLGG SSL GTKL++KPS +    K +  GAV AKYGDKSVYF
Sbjct: 1   MASLAT-FAAVQPATVKGLGG-SSLTGTKLHVKPSRQSLRPKNRRNGAVEAKYGDKSVYF 58

Query: 31  DLEDLGNTTG 2
           DLEDLGNTTG
Sbjct: 59  DLEDLGNTTG 68