BLASTX nr result

ID: Bupleurum21_contig00000325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000325
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520451.1| tubulin beta chain, putative [Ricinus commun...   410   e-144
sp|P29501.1|TBB2_PEA RecName: Full=Tubulin beta-2 chain; AltName...   409   e-144
ref|XP_002267380.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...   410   e-143
ref|XP_002510784.1| tubulin beta chain, putative [Ricinus commun...   410   e-143
gb|ABY86655.1| beta-tubulin 4 [Gossypium hirsutum]                    410   e-143

>ref|XP_002520451.1| tubulin beta chain, putative [Ricinus communis]
           gi|223540293|gb|EEF41864.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 545

 Score =  410 bits (1055), Expect(2) = e-144
 Identities = 199/220 (90%), Positives = 203/220 (92%)
 Frame = +1

Query: 1   IGAKFWEVICAEHGIDSTGRYQGDTDIQLERINVYYNEASSQRYVPRAVLMDLEPGTMDS 180
           IGAKFWEV+CAEHGIDSTGRY GDTD+QLERINVYYNEAS  R+VPRAVLMDLEPGTMDS
Sbjct: 113 IGAKFWEVVCAEHGIDSTGRYDGDTDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDS 172

Query: 181 LRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV 360
           +RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV
Sbjct: 173 VRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV 232

Query: 361 CHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 540
           CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN
Sbjct: 233 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 292

Query: 541 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 660
           ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG
Sbjct: 293 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 332



 Score =  127 bits (318), Expect(2) = e-144
 Identities = 60/62 (96%), Positives = 62/62 (100%)
 Frame = +3

Query: 765 GFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAVFRGKMSTKEVDE 944
           GFAPLTSRGSQQYRAL+VPELTQQMWDSKNMMCAADPRHGRYLTASA+FRGKMSTKEVDE
Sbjct: 366 GFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 425

Query: 945 QM 950
           QM
Sbjct: 426 QM 427


>sp|P29501.1|TBB2_PEA RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
           gi|388254|emb|CAA38614.1| beta-tubulin 2 [Pisum sativum]
          Length = 447

 Score =  409 bits (1052), Expect(2) = e-144
 Identities = 199/220 (90%), Positives = 202/220 (91%)
 Frame = +1

Query: 1   IGAKFWEVICAEHGIDSTGRYQGDTDIQLERINVYYNEASSQRYVPRAVLMDLEPGTMDS 180
           IGAKFWEV+CAEHGID TGRY GDTD+QLERINVYYNEAS  RYVPRAVLMDLEPGTMDS
Sbjct: 14  IGAKFWEVVCAEHGIDPTGRYGGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDS 73

Query: 181 LRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV 360
           +RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV
Sbjct: 74  VRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV 133

Query: 361 CHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 540
           CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN
Sbjct: 134 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 193

Query: 541 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 660
           ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG
Sbjct: 194 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 233



 Score =  128 bits (321), Expect(2) = e-144
 Identities = 60/62 (96%), Positives = 62/62 (100%)
 Frame = +3

Query: 765 GFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAVFRGKMSTKEVDE 944
           GFAPLTSRGSQQYRALSVPE+TQQMWDSKNMMCAADPRHGRYLTASA+FRGKMSTKEVDE
Sbjct: 267 GFAPLTSRGSQQYRALSVPEITQQMWDSKNMMCAADPRHGRYLTASAIFRGKMSTKEVDE 326

Query: 945 QM 950
           QM
Sbjct: 327 QM 328


>ref|XP_002267380.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
          Length = 449

 Score =  410 bits (1055), Expect(2) = e-143
 Identities = 198/220 (90%), Positives = 204/220 (92%)
 Frame = +1

Query: 1   IGAKFWEVICAEHGIDSTGRYQGDTDIQLERINVYYNEASSQRYVPRAVLMDLEPGTMDS 180
           IGAKFWEV+CAEHGIDSTGRYQGDT++QLER+NVYYNEAS  R+VPRAVLMDLEPGTMDS
Sbjct: 16  IGAKFWEVVCAEHGIDSTGRYQGDTELQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDS 75

Query: 181 LRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV 360
           +RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV
Sbjct: 76  VRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV 135

Query: 361 CHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 540
           CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN
Sbjct: 136 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195

Query: 541 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 660
           ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235



 Score =  125 bits (315), Expect(2) = e-143
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = +3

Query: 765 GFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAVFRGKMSTKEVDE 944
           GFAPLTSRGSQQYRAL+VPELTQQMWD+KNMMCAADPRHGRYLTASA+FRGKMSTKEVDE
Sbjct: 269 GFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 328

Query: 945 QM 950
           QM
Sbjct: 329 QM 330


>ref|XP_002510784.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549899|gb|EEF51386.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 448

 Score =  410 bits (1054), Expect(2) = e-143
 Identities = 198/220 (90%), Positives = 203/220 (92%)
 Frame = +1

Query: 1   IGAKFWEVICAEHGIDSTGRYQGDTDIQLERINVYYNEASSQRYVPRAVLMDLEPGTMDS 180
           IGAKFWEV+CAEHGIDSTGRYQGD D+QLER+NVYYNEAS  R+VPRAVLMDLEPGTMDS
Sbjct: 16  IGAKFWEVVCAEHGIDSTGRYQGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDS 75

Query: 181 LRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV 360
           +RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV
Sbjct: 76  VRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV 135

Query: 361 CHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 540
           CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN
Sbjct: 136 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195

Query: 541 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 660
           ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235



 Score =  125 bits (315), Expect(2) = e-143
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = +3

Query: 765 GFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAVFRGKMSTKEVDE 944
           GFAPLTSRGSQQYRAL+VPELTQQMWD+KNMMCAADPRHGRYLTASA+FRGKMSTKEVDE
Sbjct: 269 GFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 328

Query: 945 QM 950
           QM
Sbjct: 329 QM 330


>gb|ABY86655.1| beta-tubulin 4 [Gossypium hirsutum]
          Length = 448

 Score =  410 bits (1054), Expect(2) = e-143
 Identities = 198/220 (90%), Positives = 203/220 (92%)
 Frame = +1

Query: 1   IGAKFWEVICAEHGIDSTGRYQGDTDIQLERINVYYNEASSQRYVPRAVLMDLEPGTMDS 180
           IGAKFWEV+CAEHGIDSTGRYQGD D+QLER+NVYYNEAS  R+VPRAVLMDLEPGTMDS
Sbjct: 16  IGAKFWEVVCAEHGIDSTGRYQGDNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDS 75

Query: 181 LRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV 360
           +RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV
Sbjct: 76  VRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQV 135

Query: 361 CHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 540
           CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN
Sbjct: 136 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEN 195

Query: 541 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 660
           ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235



 Score =  125 bits (315), Expect(2) = e-143
 Identities = 59/62 (95%), Positives = 62/62 (100%)
 Frame = +3

Query: 765 GFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADPRHGRYLTASAVFRGKMSTKEVDE 944
           GFAPLTSRGSQQYRAL+VPELTQQMWD+KNMMCAADPRHGRYLTASA+FRGKMSTKEVDE
Sbjct: 269 GFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 328

Query: 945 QM 950
           QM
Sbjct: 329 QM 330


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