BLASTX nr result

ID: Bupleurum21_contig00000324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000324
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34823.1|EF1A2_DAUCA RecName: Full=Elongation factor 1-alpha;...   667   0.0  
gb|AFW77593.1| putative translation elongation factor Tu family ...   659   0.0  
gb|ACG25290.1| elongation factor 1-alpha [Zea mays] gi|413944947...   659   0.0  
gb|ACR38047.1| unknown [Zea mays] gi|413944974|gb|AFW77623.1| el...   659   0.0  
ref|NP_001234035.1| elongation factor 1-alpha [Solanum lycopersi...   658   0.0  

>sp|P34823.1|EF1A2_DAUCA RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha
            gi|217913|dbj|BAA02205.1| elongation factor 1-alpha
            [Daucus carota]
          Length = 447

 Score =  667 bits (1720), Expect = 0.0
 Identities = 343/403 (85%), Positives = 347/403 (86%)
 Frame = +3

Query: 3    GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID 182
            GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID
Sbjct: 32   GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID 91

Query: 183  APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC 362
            APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC
Sbjct: 92   APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151

Query: 363  CNKMDATTPKYSXXXXXXXXXXXXXXXXXXXXXXSYLKKVGYNPDKIAFIPISGFEGDNM 542
            CNKMDATTPKYS                      SYLKKVGYNPDKIAFIPISGFEGDNM
Sbjct: 152  CNKMDATTPKYSKSRFEEIVKEVS----------SYLKKVGYNPDKIAFIPISGFEGDNM 201

Query: 543  IERSSNLDWYKGPTLLEALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK 722
            I+RS+NLDWYKGPTLLEALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK
Sbjct: 202  IDRSTNLDWYKGPTLLEALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK 261

Query: 723  PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 902
            PGMVVTFGP+GLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP
Sbjct: 262  PGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321

Query: 903  AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIAVKFAEIQTKIDRRSGKELEKEP 1082
            A                                  HIAVKFAEIQTKIDRRSGKELEKEP
Sbjct: 322  A--KEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEKEP 379

Query: 1083 KFLKNGDAGFVKMIPTKPMVVETFMAYPPLGRFAVRDMRQTVA 1211
            KFLKNGDAGFVKMIPTKPMVVETFM+YPPLGRFAVRDMRQTVA
Sbjct: 380  KFLKNGDAGFVKMIPTKPMVVETFMSYPPLGRFAVRDMRQTVA 422


>gb|AFW77593.1| putative translation elongation factor Tu family protein isoform 1
            [Zea mays] gi|413944945|gb|AFW77594.1| putative
            translation elongation factor Tu family protein isoform 2
            [Zea mays]
          Length = 447

 Score =  659 bits (1700), Expect = 0.0
 Identities = 339/403 (84%), Positives = 344/403 (85%)
 Frame = +3

Query: 3    GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID 182
            GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID
Sbjct: 32   GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID 91

Query: 183  APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC 362
            APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC
Sbjct: 92   APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151

Query: 363  CNKMDATTPKYSXXXXXXXXXXXXXXXXXXXXXXSYLKKVGYNPDKIAFIPISGFEGDNM 542
            CNKMDATTPKYS                      SYLKKVGYNPDKIAF+PISGFEGDNM
Sbjct: 152  CNKMDATTPKYSKARYDEIVKEVS----------SYLKKVGYNPDKIAFVPISGFEGDNM 201

Query: 543  IERSSNLDWYKGPTLLEALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK 722
            IERS+NLDWYKGPTLLEALDQI+EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK
Sbjct: 202  IERSTNLDWYKGPTLLEALDQITEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK 261

Query: 723  PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 902
            PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+VASNSKDDP
Sbjct: 262  PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP 321

Query: 903  AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIAVKFAEIQTKIDRRSGKELEKEP 1082
            A                                  HIAVKFAE+ TKIDRRSGKELEKEP
Sbjct: 322  A--KEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELITKIDRRSGKELEKEP 379

Query: 1083 KFLKNGDAGFVKMIPTKPMVVETFMAYPPLGRFAVRDMRQTVA 1211
            KFLKNGDAG VKMIPTKPMVVETF AYPPLGRFAVRDMRQTVA
Sbjct: 380  KFLKNGDAGMVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVA 422


>gb|ACG25290.1| elongation factor 1-alpha [Zea mays] gi|413944947|gb|AFW77596.1|
            putative translation elongation factor Tu family protein
            [Zea mays] gi|413944950|gb|AFW77599.1| putative
            translation elongation factor Tu family protein isoform 1
            [Zea mays] gi|413944951|gb|AFW77600.1| putative
            translation elongation factor Tu family protein isoform 2
            [Zea mays]
          Length = 447

 Score =  659 bits (1700), Expect = 0.0
 Identities = 339/403 (84%), Positives = 344/403 (85%)
 Frame = +3

Query: 3    GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID 182
            GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID
Sbjct: 32   GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID 91

Query: 183  APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC 362
            APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC
Sbjct: 92   APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151

Query: 363  CNKMDATTPKYSXXXXXXXXXXXXXXXXXXXXXXSYLKKVGYNPDKIAFIPISGFEGDNM 542
            CNKMDATTPKYS                      SYLKKVGYNPDKIAF+PISGFEGDNM
Sbjct: 152  CNKMDATTPKYSKARYEEIVKEVS----------SYLKKVGYNPDKIAFVPISGFEGDNM 201

Query: 543  IERSSNLDWYKGPTLLEALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK 722
            IERS+NLDWYKGPTLLEALDQI+EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK
Sbjct: 202  IERSTNLDWYKGPTLLEALDQITEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK 261

Query: 723  PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 902
            PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+VASNSKDDP
Sbjct: 262  PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP 321

Query: 903  AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIAVKFAEIQTKIDRRSGKELEKEP 1082
            A                                  HIAVKFAE+ TKIDRRSGKELEKEP
Sbjct: 322  A--KEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELITKIDRRSGKELEKEP 379

Query: 1083 KFLKNGDAGFVKMIPTKPMVVETFMAYPPLGRFAVRDMRQTVA 1211
            KFLKNGDAG VKMIPTKPMVVETF AYPPLGRFAVRDMRQTVA
Sbjct: 380  KFLKNGDAGMVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVA 422


>gb|ACR38047.1| unknown [Zea mays] gi|413944974|gb|AFW77623.1| elongation factor
            alpha1 [Zea mays]
          Length = 447

 Score =  659 bits (1699), Expect = 0.0
 Identities = 339/403 (84%), Positives = 343/403 (85%)
 Frame = +3

Query: 3    GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID 182
            GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID
Sbjct: 32   GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID 91

Query: 183  APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC 362
            APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC
Sbjct: 92   APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151

Query: 363  CNKMDATTPKYSXXXXXXXXXXXXXXXXXXXXXXSYLKKVGYNPDKIAFIPISGFEGDNM 542
            CNKMDATTPKYS                      SYLKKVGYNPDKIAF+PISGFEGDNM
Sbjct: 152  CNKMDATTPKYSKARYDEIVKEVS----------SYLKKVGYNPDKIAFVPISGFEGDNM 201

Query: 543  IERSSNLDWYKGPTLLEALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK 722
            IERS+NLDWYKGPTLLEALDQI+EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK
Sbjct: 202  IERSTNLDWYKGPTLLEALDQITEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK 261

Query: 723  PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 902
            PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP
Sbjct: 262  PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321

Query: 903  AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIAVKFAEIQTKIDRRSGKELEKEP 1082
            A                                  HIAVKFAE+ TKIDRRSGKELEKEP
Sbjct: 322  A--KEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELITKIDRRSGKELEKEP 379

Query: 1083 KFLKNGDAGFVKMIPTKPMVVETFMAYPPLGRFAVRDMRQTVA 1211
            KFLKNGDAG VKMIPTKPMVVETF  YPPLGRFAVRDMRQTVA
Sbjct: 380  KFLKNGDAGMVKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVA 422


>ref|NP_001234035.1| elongation factor 1-alpha [Solanum lycopersicum]
            gi|119150|sp|P17786.1|EF1A_SOLLC RecName: Full=Elongation
            factor 1-alpha; Short=EF-1-alpha gi|19273|emb|CAA32618.1|
            unnamed protein product [Solanum lycopersicum]
            gi|295810|emb|CAA37212.1| elongation factor 1-alpha
            [Solanum lycopersicum]
          Length = 448

 Score =  658 bits (1697), Expect = 0.0
 Identities = 339/403 (84%), Positives = 342/403 (84%)
 Frame = +3

Query: 3    GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID 182
            GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID
Sbjct: 32   GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVID 91

Query: 183  APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC 362
            APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC
Sbjct: 92   APGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICC 151

Query: 363  CNKMDATTPKYSXXXXXXXXXXXXXXXXXXXXXXSYLKKVGYNPDKIAFIPISGFEGDNM 542
            CNKMDATTPKYS                      SYLKKVGYNPDKI F+PISGFEGDNM
Sbjct: 152  CNKMDATTPKYSKARYDEIVKEVS----------SYLKKVGYNPDKIPFVPISGFEGDNM 201

Query: 543  IERSSNLDWYKGPTLLEALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK 722
            IERS+NLDWYKGPTLLEALDQI+EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK
Sbjct: 202  IERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIK 261

Query: 723  PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 902
            PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP
Sbjct: 262  PGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDP 321

Query: 903  AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIAVKFAEIQTKIDRRSGKELEKEP 1082
            A                                  HIAVKFAEI TKIDRRSGKELEKEP
Sbjct: 322  A--KGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEP 379

Query: 1083 KFLKNGDAGFVKMIPTKPMVVETFMAYPPLGRFAVRDMRQTVA 1211
            KFLKNGDAG VKMIPTKPMVVETF  YPPLGRFAVRDMRQTVA
Sbjct: 380  KFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVA 422


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