BLASTX nr result

ID: Bupleurum21_contig00000312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000312
         (2004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276563.1| PREDICTED: chitinase-like protein 2 [Vitis v...   522   e-145
ref|XP_002515664.1| chitinase, putative [Ricinus communis] gi|22...   509   e-141
dbj|BAJ33659.1| unnamed protein product [Thellungiella halophila]     507   e-141
ref|XP_002269474.1| PREDICTED: chitinase-like protein 2 [Vitis v...   506   e-141
ref|NP_172076.1| chitinase-like protein 1 [Arabidopsis thaliana]...   505   e-140

>ref|XP_002276563.1| PREDICTED: chitinase-like protein 2 [Vitis vinifera]
            gi|147853271|emb|CAN78546.1| hypothetical protein
            VITISV_034797 [Vitis vinifera]
          Length = 321

 Score =  522 bits (1344), Expect = e-145
 Identities = 232/311 (74%), Positives = 267/311 (85%)
 Frame = +3

Query: 636  TLIMIMVALFLLVTVNGDFGSSSXXXXXXXXXXXXXCSQGWECKQWSKFCCNQTISDLFQ 815
            + ++IM    ++VTV G  GS +             C +GWECK WSK+CCNQT+SD FQ
Sbjct: 6    SFLLIMAVAAMVVTVGGQ-GSGTKPLVKVLKGGLKVCDKGWECKGWSKYCCNQTVSDFFQ 64

Query: 816  VYQFEELFSKRNTPTAHAVGFWDYQSFITAAAQFEPLGFGTTGGKYMQMKEIAAFFGHVG 995
             YQFE LF+KRNTP AHAVGFWDY+SFITAAA ++P GFGT GGK MQMKE+AAF GHVG
Sbjct: 65   TYQFENLFAKRNTPVAHAVGFWDYRSFITAAAVYQPHGFGTAGGKLMQMKEVAAFLGHVG 124

Query: 996  SKTSCGYGVATGGPLAWGLCYNRELSPSQSYCNDEYKYTYPCAPGAEYYGRGALPIYWNI 1175
            SKT+CGYGVATGGPLAWGLCYN+E+SPS+SYC+D+YKYTYPC PG EY+GRGALPIYWN 
Sbjct: 125  SKTTCGYGVATGGPLAWGLCYNKEMSPSKSYCDDDYKYTYPCTPGVEYFGRGALPIYWNY 184

Query: 1176 NYGATGEALKVDLLNHPEYIEQNATLAFQAAIWRWMTGIKKGQPSSHDAFVGNWKPTKND 1355
            NYG  GEALKVDLLNHPEYIEQNATLAFQAAIWRWMT +KK QPS+HD FVG WKPTKND
Sbjct: 185  NYGEAGEALKVDLLNHPEYIEQNATLAFQAAIWRWMTPVKKQQPSAHDVFVGTWKPTKND 244

Query: 1356 TLAKRTPGFGATMNILYGEMVCGQGDIDAMNNMISHYQYYLDLMGVGREEAGPHDVLSCA 1535
            TLAKR PGFGATMN+LYG+ VCGQGD+D+MNN++SHYQYYLDLMGVGREEAGPH+VL+CA
Sbjct: 245  TLAKRIPGFGATMNVLYGDSVCGQGDVDSMNNIVSHYQYYLDLMGVGREEAGPHEVLTCA 304

Query: 1536 EQKAFNPATAS 1568
            EQ+AFNP+++S
Sbjct: 305  EQEAFNPSSSS 315


>ref|XP_002515664.1| chitinase, putative [Ricinus communis] gi|223545207|gb|EEF46716.1|
            chitinase, putative [Ricinus communis]
          Length = 321

 Score =  509 bits (1311), Expect = e-141
 Identities = 226/272 (83%), Positives = 250/272 (91%)
 Frame = +3

Query: 744  CSQGWECKQWSKFCCNQTISDLFQVYQFEELFSKRNTPTAHAVGFWDYQSFITAAAQFEP 923
            C++GWEC  WS++CCNQTISD FQ YQFE LFSKRN P AHA+GFWDYQSFITA+A F+P
Sbjct: 42   CTRGWECASWSEYCCNQTISDFFQTYQFENLFSKRNAPVAHAIGFWDYQSFITASALFQP 101

Query: 924  LGFGTTGGKYMQMKEIAAFFGHVGSKTSCGYGVATGGPLAWGLCYNRELSPSQSYCNDEY 1103
            LGF TTGGK MQMKE+AAFF HVGSKTSCGYGVATGGPLA+GLCYNRE+SPSQSYC+D Y
Sbjct: 102  LGFCTTGGKLMQMKELAAFFSHVGSKTSCGYGVATGGPLAYGLCYNREMSPSQSYCDDFY 161

Query: 1104 KYTYPCAPGAEYYGRGALPIYWNINYGATGEALKVDLLNHPEYIEQNATLAFQAAIWRWM 1283
            K+TYPC PGAEYYGRGALPIYWN NYGATGEALKV+LL+HPEYIEQNATLAFQAAIWRWM
Sbjct: 162  KFTYPCTPGAEYYGRGALPIYWNYNYGATGEALKVNLLDHPEYIEQNATLAFQAAIWRWM 221

Query: 1284 TGIKKGQPSSHDAFVGNWKPTKNDTLAKRTPGFGATMNILYGEMVCGQGDIDAMNNMISH 1463
            T +KK QPS+HD FVGNWKPTKNDTL+KR PGFG TMNILYG++VCGQGDID MNN++SH
Sbjct: 222  TPMKKSQPSAHDVFVGNWKPTKNDTLSKRIPGFGTTMNILYGDLVCGQGDIDGMNNIVSH 281

Query: 1464 YQYYLDLMGVGREEAGPHDVLSCAEQKAFNPA 1559
            Y YYLDLMGVGREEAGPH+ L+CAEQKAFNP+
Sbjct: 282  YLYYLDLMGVGREEAGPHEYLTCAEQKAFNPS 313


>dbj|BAJ33659.1| unnamed protein product [Thellungiella halophila]
          Length = 303

 Score =  507 bits (1305), Expect = e-141
 Identities = 224/274 (81%), Positives = 250/274 (91%)
 Frame = +3

Query: 744  CSQGWECKQWSKFCCNQTISDLFQVYQFEELFSKRNTPTAHAVGFWDYQSFITAAAQFEP 923
            C+QGWEC  WS++CCNQTISD FQVYQFE+LF+KRNTP AHAVGFWDYQSFITAAA +EP
Sbjct: 24   CTQGWECSWWSEYCCNQTISDYFQVYQFEQLFAKRNTPVAHAVGFWDYQSFITAAALYEP 83

Query: 924  LGFGTTGGKYMQMKEIAAFFGHVGSKTSCGYGVATGGPLAWGLCYNRELSPSQSYCNDEY 1103
            LGFGTTGGK M  KEIAAF GHV SKTSCGYGVATGGPLAWGLCYNRE+SPSQSYC+D +
Sbjct: 84   LGFGTTGGKLMGQKEIAAFLGHVASKTSCGYGVATGGPLAWGLCYNREMSPSQSYCDDSW 143

Query: 1104 KYTYPCAPGAEYYGRGALPIYWNINYGATGEALKVDLLNHPEYIEQNATLAFQAAIWRWM 1283
            K+ YPC+PGAEYYGRGALPIYWN NYGA GEALK DLLNHPEYIEQNATLAFQAA+WRWM
Sbjct: 144  KFKYPCSPGAEYYGRGALPIYWNFNYGAAGEALKADLLNHPEYIEQNATLAFQAAVWRWM 203

Query: 1284 TGIKKGQPSSHDAFVGNWKPTKNDTLAKRTPGFGATMNILYGEMVCGQGDIDAMNNMISH 1463
            T IKK QPS+HD FVGNWKPTKNDTL+KR P FG+TMN+LYGE+ CGQGDID MNN++SH
Sbjct: 204  TPIKKNQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGELTCGQGDIDPMNNIVSH 263

Query: 1464 YQYYLDLMGVGREEAGPHDVLSCAEQKAFNPATA 1565
            Y Y+LDL+G+GRE+AGP++ LSCAEQKAFNP+TA
Sbjct: 264  YLYFLDLLGIGREDAGPNEELSCAEQKAFNPSTA 297


>ref|XP_002269474.1| PREDICTED: chitinase-like protein 2 [Vitis vinifera]
          Length = 316

 Score =  506 bits (1303), Expect = e-141
 Identities = 231/309 (74%), Positives = 263/309 (85%), Gaps = 1/309 (0%)
 Frame = +3

Query: 645  MIMVALFLLVTVNGDFGSSSXXXXXXXXXXXXXCSQGWECKQWSKFCCNQTISDLFQVYQ 824
            + + A+  +V V GD   SS             C +GWECK WS+FCCN TISD FQ YQ
Sbjct: 10   LAVAAIVAVVVVEGD---SSVKTLVKTVKGKKVCDKGWECKGWSEFCCNLTISDYFQTYQ 66

Query: 825  FEELFSKRNTPTAHAVGFWDYQSFITAAAQFEPLGFGTTGGKYMQMKEIAAFFGHVGSKT 1004
            FE LFSKRN+P AHAVGFWDY+SFI A+A ++PLGFGTTGGK MQMKE+AAF GHVG KT
Sbjct: 67   FENLFSKRNSPVAHAVGFWDYRSFILASAVYQPLGFGTTGGKVMQMKELAAFLGHVGCKT 126

Query: 1005 SCGYGVATGGPLAWGLCYNRELSPSQSYCNDEYKYTYPCAPGAEYYGRGALPIYWNINYG 1184
            SCGYGVATGGPL+WGLCYN+E+SPS+SYC+D YKYTYPC PGAEYYGRGALPI+WN NYG
Sbjct: 127  SCGYGVATGGPLSWGLCYNKEMSPSKSYCDDFYKYTYPCTPGAEYYGRGALPIFWNYNYG 186

Query: 1185 ATGEALKVDLLNHPEYIEQNATLAFQAAIWRWMTGIKKGQPSSHDAFVGNWKPTKNDTLA 1364
            ATGEALKV+LL+HPEYIEQNATLAFQAAIWRWMT +KK QPS+HD FVGNWKPTKNDTLA
Sbjct: 187  ATGEALKVNLLDHPEYIEQNATLAFQAAIWRWMTPVKKSQPSAHDVFVGNWKPTKNDTLA 246

Query: 1365 KRTPGFGATMNILYGEMVCGQGDIDAMNNMISHYQYYLDLMGVGREEAGPHDVLSCAEQK 1544
            KR PGFG TMNILYG+ VCGQGD+D+MNN+ISHYQYYLDL+GVGRE+AGPH+ ++CAEQ 
Sbjct: 247  KRVPGFGTTMNILYGDQVCGQGDVDSMNNIISHYQYYLDLLGVGREQAGPHENVTCAEQI 306

Query: 1545 AFNPA-TAS 1568
            AFNP+ TAS
Sbjct: 307  AFNPSYTAS 315


>ref|NP_172076.1| chitinase-like protein 1 [Arabidopsis thaliana]
            gi|75191903|sp|Q9MA41.1|CTL1_ARATH RecName:
            Full=Chitinase-like protein 1; Short=AtCTL1; AltName:
            Full=Protein ANION ALTERED ROOT MORPHOLOGY; AltName:
            Full=Protein ECTOPIC DEPOSITION OF LIGNIN IN PITH 1;
            AltName: Full=Protein ECTOPIC ROOT HAIR 2; AltName:
            Full=Protein POM-POM1; AltName: Full=Protein SENSITIVE TO
            HOT TEMPERATURES 2; Flags: Precursor
            gi|6850314|gb|AAF29391.1|AC009999_11 Contains similarity
            to a basic endochitinase from Arabidopis thaliana
            gb|AB023448, and contains a Chitinases class I PF|00182
            domain. ESTs gb|AI995747, gb|AA728545, gb|Z26222,
            gb|Z25683, gb|T88386, gb|T14122, gb|T04241, gb|N38122
            come from this gene [Arabidopsis thaliana]
            gi|12083324|gb|AAG48821.1|AF332458_1 putative class I
            chitinase [Arabidopsis thaliana]
            gi|17226329|gb|AAL37736.1|AF422178_1 chitinase-like
            protein 1 [Arabidopsis thaliana]
            gi|17226331|gb|AAL37737.1|AF422179_1 chitinase-like
            protein 1 [Arabidopsis thaliana]
            gi|14334488|gb|AAK59442.1| putative class I chitinase
            [Arabidopsis thaliana] gi|21280935|gb|AAM44973.1|
            putative class I chitinase [Arabidopsis thaliana]
            gi|332189783|gb|AEE27904.1| chitinase-like protein 1
            [Arabidopsis thaliana]
          Length = 321

 Score =  505 bits (1301), Expect = e-140
 Identities = 230/315 (73%), Positives = 260/315 (82%)
 Frame = +3

Query: 618  MKMGSGTLIMIMVALFLLVTVNGDFGSSSXXXXXXXXXXXXXCSQGWECKQWSKFCCNQT 797
            ++ GS  +++++   FL +  NG+                  C+QGWEC  WSK+CCNQT
Sbjct: 4    IRSGSIVILVLLAVSFLALVANGE----DKTIKVKKVRGNKVCTQGWECSWWSKYCCNQT 59

Query: 798  ISDLFQVYQFEELFSKRNTPTAHAVGFWDYQSFITAAAQFEPLGFGTTGGKYMQMKEIAA 977
            ISD FQVYQFE+LFSKRNTP AHAVGFWDYQSFITAAA FEPLGFGTTGGK M  KE+AA
Sbjct: 60   ISDYFQVYQFEQLFSKRNTPIAHAVGFWDYQSFITAAALFEPLGFGTTGGKLMGQKEMAA 119

Query: 978  FFGHVGSKTSCGYGVATGGPLAWGLCYNRELSPSQSYCNDEYKYTYPCAPGAEYYGRGAL 1157
            F GHV SKTSCGYGVATGGPLAWGLCYNRE+SP QSYC++ +K+ YPC+PGAEYYGRGAL
Sbjct: 120  FLGHVASKTSCGYGVATGGPLAWGLCYNREMSPMQSYCDESWKFKYPCSPGAEYYGRGAL 179

Query: 1158 PIYWNINYGATGEALKVDLLNHPEYIEQNATLAFQAAIWRWMTGIKKGQPSSHDAFVGNW 1337
            PIYWN NYGA GEALK DLLNHPEYIEQNATLAFQAAIWRWMT IK+ QPS+HD FVGNW
Sbjct: 180  PIYWNFNYGAAGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNW 239

Query: 1338 KPTKNDTLAKRTPGFGATMNILYGEMVCGQGDIDAMNNMISHYQYYLDLMGVGREEAGPH 1517
            KPTKNDTL+KR P FG+TMN+LYGE  CGQG ID MNN+ISHY Y+LDLMG+GRE+AGP+
Sbjct: 240  KPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPN 299

Query: 1518 DVLSCAEQKAFNPAT 1562
            D LSCAEQK FNP+T
Sbjct: 300  DELSCAEQKPFNPST 314


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