BLASTX nr result
ID: Bupleurum21_contig00000309
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000309
(2217 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi... 575 e-161
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera] 573 e-161
ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containi... 554 e-155
ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|2... 540 e-151
ref|XP_002329818.1| predicted protein [Populus trichocarpa] gi|2... 533 e-149
>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 575 bits (1481), Expect = e-161
Identities = 286/497 (57%), Positives = 364/497 (73%)
Frame = +1
Query: 4 RSYYANRMNKHTLYTKISPLGNPNFDLTPELDDWISKGYKVRFAELQRIILDLRRRKRFS 183
R+YY +R K +LY KISPLG+PN + PELD+W+ G KV AELQRII DLR+RKRFS
Sbjct: 29 RTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFS 88
Query: 184 QALQVSEWMNKRRVFEFTPTEHAVQLDLIGKVHGFVTAERYFENLEEQDKTDKTYGALLH 363
QAL++SEWM+K+ + F+PTEHAVQLDLIG+V GF++AE YF +L+ DKTDKTYGALL+
Sbjct: 89 QALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLN 148
Query: 364 CYVRQRQTDKALAHLQKMKDLGIALAPLAYNEIMNLYTCAGQHEKTYEVLTDMKKNGVTP 543
CYVRQRQTDK+L+HLQKMK++G A +PL YN+IM LYT GQHEK +VLT+MK++ V P
Sbjct: 149 CYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYP 208
Query: 544 DILSYKICINSYGVKSDIEGMERILEEMENQPHIVMDWIAYATVGNHYITAGLKGKANIA 723
D SY+ICINSYG +SDI+GME +L+EME QPHIVMDW YA N YI AGL KA A
Sbjct: 209 DNFSYRICINSYGAQSDIQGMENVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEA 268
Query: 724 LNKAEAFLDDKTGIGHNHLITLHARLGNTSDVFRMWNLLKSACKRCINKDYIVMLDTLGK 903
L K+E LD + G+G+NHLI+L+A LGN ++V R+W+L KSACKR IN+DYI ML++L +
Sbjct: 269 LKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVR 328
Query: 904 LGEFTKAELLVEEWESSGNCYDFRVPNAVIVGYSNKGLYDKARELLEKLVHKQRTTTPES 1083
LGE +AE ++ EWESSGNCYDFRVPN VI+GYS KGL++KA +L++L+ K + TTP S
Sbjct: 329 LGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPNS 388
Query: 1084 WERVAAGFASMGEMENALYCLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTI 1263
W VA+G+ GEME A+ C+KA + I
Sbjct: 389 WGTVASGYMDEGEMEKAVECMKA-------------------AISLHVNNKGRKPNSRVI 429
Query: 1264 TNLLNFLVKKGSVEDVESFVASLRNVVPVNRQMYHALLKAYIRDGKEVDGVLNRMKVDAI 1443
+L++L KG VEDVE+FV SLR V+P+NR+MYH L+ A IR GKEVDG+L MK D I
Sbjct: 430 AGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKADKI 489
Query: 1444 LENEDTKKIKNMEQIKI 1494
+E+E+TKKI +Q KI
Sbjct: 490 VEDEETKKILGTKQNKI 506
>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 573 bits (1477), Expect = e-161
Identities = 285/497 (57%), Positives = 365/497 (73%)
Frame = +1
Query: 4 RSYYANRMNKHTLYTKISPLGNPNFDLTPELDDWISKGYKVRFAELQRIILDLRRRKRFS 183
R+YY +R K +LY KISPLG+PN + PELD+W+ G KV AELQRII DLR+RKRFS
Sbjct: 29 RTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFS 88
Query: 184 QALQVSEWMNKRRVFEFTPTEHAVQLDLIGKVHGFVTAERYFENLEEQDKTDKTYGALLH 363
QAL++SEWM+K+ + F+PTEHAVQLDLIG+V GF++AE YF +L+ DKTDKTYGALL+
Sbjct: 89 QALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLN 148
Query: 364 CYVRQRQTDKALAHLQKMKDLGIALAPLAYNEIMNLYTCAGQHEKTYEVLTDMKKNGVTP 543
CYVRQRQTDK+L+HLQKMK++G A +PL YN+IM LYT GQHEK +VLT+MK++ V P
Sbjct: 149 CYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSHVYP 208
Query: 544 DILSYKICINSYGVKSDIEGMERILEEMENQPHIVMDWIAYATVGNHYITAGLKGKANIA 723
D SY+ICINSY +SDI+GME++L+EME QPHIVMDW YA N YI AGL KA A
Sbjct: 209 DNFSYRICINSYAAQSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEA 268
Query: 724 LNKAEAFLDDKTGIGHNHLITLHARLGNTSDVFRMWNLLKSACKRCINKDYIVMLDTLGK 903
L K+E LD + G+G+NHLI+L+A LGN ++V R+W+L KSACKR IN+DYI ML++L +
Sbjct: 269 LKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVR 328
Query: 904 LGEFTKAELLVEEWESSGNCYDFRVPNAVIVGYSNKGLYDKARELLEKLVHKQRTTTPES 1083
LGE +AE ++ EWESSGNCYDFRVPN VI+GYS KGL++KA +L++L+ K + TTP+S
Sbjct: 329 LGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPDS 388
Query: 1084 WERVAAGFASMGEMENALYCLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTI 1263
W VA+G+ GEME A+ C+KA + I
Sbjct: 389 WGTVASGYMDEGEMEKAVECMKA-------------------AISLHVNNKGRKPNSRVI 429
Query: 1264 TNLLNFLVKKGSVEDVESFVASLRNVVPVNRQMYHALLKAYIRDGKEVDGVLNRMKVDAI 1443
+L++L KG VEDVE+FV SLR V+P+NR+MYH L+ A IR GKEVDG+L MK D I
Sbjct: 430 AGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKADKI 489
Query: 1444 LENEDTKKIKNMEQIKI 1494
+E+E+TKKI +Q KI
Sbjct: 490 VEDEETKKILGTKQNKI 506
>ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 554 bits (1428), Expect = e-155
Identities = 280/491 (57%), Positives = 350/491 (71%)
Frame = +1
Query: 4 RSYYANRMNKHTLYTKISPLGNPNFDLTPELDDWISKGYKVRFAELQRIILDLRRRKRFS 183
RSYY +R K +LY+KISPLGNPN + P LDDW+ KG K+R AELQRII DLR+R RFS
Sbjct: 11 RSYYTSRSKKPSLYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKRSRFS 70
Query: 184 QALQVSEWMNKRRVFEFTPTEHAVQLDLIGKVHGFVTAERYFENLEEQDKTDKTYGALLH 363
QALQ+SEWM+ + V F+PTE+AV LDLIGKVHGF +AE YF+ L++Q KT+KTYGALL+
Sbjct: 71 QALQISEWMHNKGVCIFSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHKTNKTYGALLN 130
Query: 364 CYVRQRQTDKALAHLQKMKDLGIALAPLAYNEIMNLYTCAGQHEKTYEVLTDMKKNGVTP 543
CYVRQRQTDKAL+HLQKMKDLG A +PL YN+IM LYT GQHEK +VL +MK+N V P
Sbjct: 131 CYVRQRQTDKALSHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQNQVLP 190
Query: 544 DILSYKICINSYGVKSDIEGMERILEEMENQPHIVMDWIAYATVGNHYITAGLKGKANIA 723
D SY+ICINSYGV+SD G+ER+L+EME QP+IVMDW Y+ N YI AGL A A
Sbjct: 191 DNFSYRICINSYGVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKAGLTRDAVCA 250
Query: 724 LNKAEAFLDDKTGIGHNHLITLHARLGNTSDVFRMWNLLKSACKRCINKDYIVMLDTLGK 903
L K+E LD+K G G+NHLI+L+A+LG ++V R+W+L K+ACKRCIN+D+ +L++L K
Sbjct: 251 LRKSEERLDNKDGQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLESLVK 310
Query: 904 LGEFTKAELLVEEWESSGNCYDFRVPNAVIVGYSNKGLYDKARELLEKLVHKQRTTTPES 1083
LGE +AE +++EWESS NCYDF +P+ VI+GYS KGL++KA +LE+L +K++ TTP
Sbjct: 311 LGELDEAEKILKEWESSDNCYDFGIPSIVIIGYSQKGLHEKALAMLEELQNKEKVTTPNC 370
Query: 1084 WERVAAGFASMGEMENALYCLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTI 1263
W VA G+ GEME A C K K I
Sbjct: 371 WSIVAGGYIHKGEMEKAFKCFKT-------------------ALSLYVENKGWKPNAKVI 411
Query: 1264 TNLLNFLVKKGSVEDVESFVASLRNVVPVNRQMYHALLKAYIRDGKEVDGVLNRMKVDAI 1443
LL ++ GSVED E V+ LRN VPVNRQMYH L+K YIR GKEVD +L RM+ D I
Sbjct: 412 AELLRWIGDNGSVEDAEVLVSLLRNAVPVNRQMYHTLIKTYIRGGKEVDDLLGRMEKDGI 471
Query: 1444 LENEDTKKIKN 1476
EN++TKKI N
Sbjct: 472 DENKETKKIIN 482
>ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|222848105|gb|EEE85652.1|
predicted protein [Populus trichocarpa]
Length = 492
Score = 540 bits (1392), Expect = e-151
Identities = 276/492 (56%), Positives = 348/492 (70%)
Frame = +1
Query: 4 RSYYANRMNKHTLYTKISPLGNPNFDLTPELDDWISKGYKVRFAELQRIILDLRRRKRFS 183
RSYY N+ NK TLY+KISPLG+ L PELD W+ G KVR AELQRII DLR+RKRFS
Sbjct: 20 RSYYTNKANKATLYSKISPLGSTP-SLEPELDSWVRSGNKVRVAELQRIIHDLRKRKRFS 78
Query: 184 QALQVSEWMNKRRVFEFTPTEHAVQLDLIGKVHGFVTAERYFENLEEQDKTDKTYGALLH 363
ALQVSEWM+K+ + F+P+EHAVQLDLIG+VHGFV+AE YF NL +QDK +KTYGALL+
Sbjct: 79 HALQVSEWMHKKDICIFSPSEHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLN 138
Query: 364 CYVRQRQTDKALAHLQKMKDLGIALAPLAYNEIMNLYTCAGQHEKTYEVLTDMKKNGVTP 543
CYVRQR+TDK++ HLQKMK++G A + L YN+IM LYT GQHEK +VL +MK+N V P
Sbjct: 139 CYVRQRETDKSILHLQKMKEMGFAKSSLTYNDIMCLYTNVGQHEKVPQVLNEMKENNVLP 198
Query: 544 DILSYKICINSYGVKSDIEGMERILEEMENQPHIVMDWIAYATVGNHYITAGLKGKANIA 723
D SY++CINS+G + D+EGME+IL EME+QP IVMDW YA N YI L KA
Sbjct: 199 DNFSYRLCINSFGARDDLEGMEKILNEMEHQPDIVMDWNTYAVAANFYIIGDLTDKAIDT 258
Query: 724 LNKAEAFLDDKTGIGHNHLITLHARLGNTSDVFRMWNLLKSACKRCINKDYIVMLDTLGK 903
L K+EA LD K G G+NHLI+L+A+LGN ++V R+W+L KSAC+R INKDYI+M+++L K
Sbjct: 259 LKKSEARLDKKDGTGYNHLISLYAKLGNKTEVLRLWDLEKSACERHINKDYIIMMESLLK 318
Query: 904 LGEFTKAELLVEEWESSGNCYDFRVPNAVIVGYSNKGLYDKARELLEKLVHKQRTTTPES 1083
L EF +AE +++EWESSGN YD RVPN +I+GYS KGL +KA+ LLE L K + T P S
Sbjct: 319 LSEFEEAEKMLKEWESSGNFYDVRVPNTLIIGYSRKGLCEKAKALLENLTEKGKMTLPNS 378
Query: 1084 WERVAAGFASMGEMENALYCLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTI 1263
W VAAGF E+ A C+KA + I
Sbjct: 379 WGIVAAGFFDKSEVAKAFSCMKA-------------------ALCLYVENKGWKPNQRVI 419
Query: 1264 TNLLNFLVKKGSVEDVESFVASLRNVVPVNRQMYHALLKAYIRDGKEVDGVLNRMKVDAI 1443
+L++L +GS ED E+FV+SL+ V+PVNR+MYHA+LKA IR GKEV +L+ MK I
Sbjct: 420 NGILSWLGDEGSAEDAEAFVSSLKTVIPVNREMYHAVLKANIRAGKEVHRLLDGMKTYNI 479
Query: 1444 LENEDTKKIKNM 1479
E+E+TKKI M
Sbjct: 480 KEDEETKKILRM 491
>ref|XP_002329818.1| predicted protein [Populus trichocarpa] gi|222870880|gb|EEF08011.1|
predicted protein [Populus trichocarpa]
Length = 494
Score = 533 bits (1374), Expect = e-149
Identities = 267/494 (54%), Positives = 352/494 (71%)
Frame = +1
Query: 4 RSYYANRMNKHTLYTKISPLGNPNFDLTPELDDWISKGYKVRFAELQRIILDLRRRKRFS 183
RSYY N+ NK TLY+K+SPLG+ L PELD WI G KV+ AELQRII D R RKRF+
Sbjct: 20 RSYYTNKTNKATLYSKLSPLGSTP-SLEPELDSWIQNGKKVKVAELQRIIHDFRMRKRFT 78
Query: 184 QALQVSEWMNKRRVFEFTPTEHAVQLDLIGKVHGFVTAERYFENLEEQDKTDKTYGALLH 363
ALQVSEWMNK+ + F+P++HAVQLDLIG+VHGFV+AE YF NL +QDK +KTYGALL+
Sbjct: 79 HALQVSEWMNKKGICIFSPSQHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLN 138
Query: 364 CYVRQRQTDKALAHLQKMKDLGIALAPLAYNEIMNLYTCAGQHEKTYEVLTDMKKNGVTP 543
CYV++R+TDK+++HLQKMK++G A + L+YN+IM LYT GQHEK +VL +MK+N V+P
Sbjct: 139 CYVQKRETDKSISHLQKMKEMGFAKSSLSYNDIMCLYTNVGQHEKVPQVLNEMKENNVSP 198
Query: 544 DILSYKICINSYGVKSDIEGMERILEEMENQPHIVMDWIAYATVGNHYITAGLKGKANIA 723
D SY++C+NSYG + D+EGME++L EME+QP IV+DW +YA + YI GL KA +
Sbjct: 199 DNFSYRLCMNSYGARGDLEGMEKMLNEMEHQPDIVVDWNSYAVAASSYIKGGLTDKAIDS 258
Query: 724 LNKAEAFLDDKTGIGHNHLITLHARLGNTSDVFRMWNLLKSACKRCINKDYIVMLDTLGK 903
L K+E LD K G G+NHLI+L+A LG ++V R+W+L KS C+R INKDYI ++ +L K
Sbjct: 259 LKKSETRLDKKDGTGYNHLISLYATLGEKTEVLRLWDLEKSTCERPINKDYINIMASLVK 318
Query: 904 LGEFTKAELLVEEWESSGNCYDFRVPNAVIVGYSNKGLYDKARELLEKLVHKQRTTTPES 1083
L EF + E +++EWE+SGN YD RVPN +I+GYS KGLY+KA+ LLE L K + T P
Sbjct: 319 LDEFEEVEKVLKEWEASGNFYDVRVPNTLIIGYSGKGLYEKAKALLENLTEKGKATLPNI 378
Query: 1084 WERVAAGFASMGEMENALYCLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTI 1263
W +VAAGF E+ A C+KA K I
Sbjct: 379 WGKVAAGFFDKNEVAKAFSCMKA-------------------ALCLYEENKEWKPNQKVI 419
Query: 1264 TNLLNFLVKKGSVEDVESFVASLRNVVPVNRQMYHALLKAYIRDGKEVDGVLNRMKVDAI 1443
T +L++L +GS ED E+FV+SL+NV+P+NR+MYHA+LKA+IR GKEV G+L+ MK I
Sbjct: 420 TGILSWLGDEGSAEDAEAFVSSLKNVIPMNREMYHAVLKAHIRAGKEVHGLLDGMKTCKI 479
Query: 1444 LENEDTKKIKNMEQ 1485
E+E+TKKI +M Q
Sbjct: 480 KEDEETKKILSMMQ 493