BLASTX nr result

ID: Bupleurum21_contig00000300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000300
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47903.1| unknown [Lotus japonicus]                              255   7e-66
ref|XP_002890860.1| elongation factor 1-beta [Arabidopsis lyrata...   253   4e-65
ref|XP_002511200.1| elongation factor 1-beta, putative [Ricinus ...   250   3e-64
ref|NP_001077627.1| elongation factor 1-delta 1 [Arabidopsis tha...   249   4e-64
pir||E86426 probable elongation factor 1-beta [imported] - Arabi...   249   4e-64

>gb|AFK47903.1| unknown [Lotus japonicus]
          Length = 232

 Score =  255 bits (652), Expect = 7e-66
 Identities = 135/217 (62%), Positives = 152/217 (70%)
 Frame = +2

Query: 170 NSESGIKKLDEYLLSRSYISGYVASKDDIKVFAALSKPPSSKYVNVSRWYNHIEALLRIA 349
           +SESG+KKLDEYLL+RSYISG+ ASKDD+ V+AALSK PS ++VNVSRWY HI+ALLRI+
Sbjct: 9   SSESGLKKLDEYLLTRSYISGFQASKDDVTVYAALSKAPSEEFVNVSRWYKHIDALLRIS 68

Query: 350 GVSGDGCGVTVEGFAPVAEVEIXXXXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXX 529
           GVSG+G GV V+G + VAE  +                      LFG             
Sbjct: 69  GVSGEGSGVIVDGSSLVAEDAVATPPAADTKASAAEDDDDDDVDLFGEETEEEKQAAEAR 128

Query: 530 XXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQQEGLFWGASKLVAVGYGI 709
                            VLLDVKPWDDETDMKKLEEAVRSVQQEGLFWGASKLVAVGY I
Sbjct: 129 AAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLFWGASKLVAVGYSI 188

Query: 710 KKLQIMMTIIDDLVSVDSLIEDHLTTEPINEYVQSCD 820
           KKLQIM+TI+DDLVSVD+LIEDHLT EPINEYVQSCD
Sbjct: 189 KKLQIMLTIVDDLVSVDTLIEDHLTVEPINEYVQSCD 225


>ref|XP_002890860.1| elongation factor 1-beta [Arabidopsis lyrata subsp. lyrata]
           gi|297336702|gb|EFH67119.1| elongation factor 1-beta
           [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score =  253 bits (646), Expect = 4e-65
 Identities = 129/217 (59%), Positives = 150/217 (69%)
 Frame = +2

Query: 170 NSESGIKKLDEYLLSRSYISGYVASKDDIKVFAALSKPPSSKYVNVSRWYNHIEALLRIA 349
           NS+SG+KKLDE+LL+RSYI+GY ASKDDI VFAAL+KPP+S+YVN SRWYNHI+ALLRI+
Sbjct: 8   NSDSGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRIS 67

Query: 350 GVSGDGCGVTVEGFAPVAEVEIXXXXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXX 529
           GVS +G GV VEG AP+ E  +                      LFG             
Sbjct: 68  GVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEER 127

Query: 530 XXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQQEGLFWGASKLVAVGYGI 709
                            VL+D+KPWDDETDMKKLEEAVRS+Q EGLFWGASKLV VGYGI
Sbjct: 128 AASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGI 187

Query: 710 KKLQIMMTIIDDLVSVDSLIEDHLTTEPINEYVQSCD 820
           KKLQIM TI+DDLVS+D++IE+ LT EPINEYVQSCD
Sbjct: 188 KKLQIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCD 224


>ref|XP_002511200.1| elongation factor 1-beta, putative [Ricinus communis]
           gi|223550315|gb|EEF51802.1| elongation factor 1-beta,
           putative [Ricinus communis]
          Length = 232

 Score =  250 bits (638), Expect = 3e-64
 Identities = 130/225 (57%), Positives = 154/225 (68%), Gaps = 2/225 (0%)
 Frame = +2

Query: 152 MGFVFYN--SESGIKKLDEYLLSRSYISGYVASKDDIKVFAALSKPPSSKYVNVSRWYNH 325
           M   FY+  S +G+K LD+YLL+RSYI+GY ASKDD+ V+AA+S  PSS+YVNVSRW++H
Sbjct: 1   MAGTFYDLGSAAGLKNLDDYLLTRSYITGYQASKDDVTVYAAISNAPSSEYVNVSRWFHH 60

Query: 326 IEALLRIAGVSGDGCGVTVEGFAPVAEVEIXXXXXXXXXXXXXXXXXXXXXXLFGXXXXX 505
           I+ALLRI+GVS +G GVTV+GFAPVAE  +                      LFG     
Sbjct: 61  IDALLRISGVSAEGSGVTVKGFAPVAEEAVATPPATDSKAADAEDDDDDDVDLFGEETEE 120

Query: 506 XXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQQEGLFWGASK 685
                                    VLLD+KPWDDETDMKKLEEAVRS+Q EGL WGASK
Sbjct: 121 EKKAAEERAAAVKASAKKKESGKSSVLLDIKPWDDETDMKKLEEAVRSIQMEGLLWGASK 180

Query: 686 LVAVGYGIKKLQIMMTIIDDLVSVDSLIEDHLTTEPINEYVQSCD 820
           LV VGYGIKKLQIMMT++DDLVSVD+LIE+HLT EPINE+VQSCD
Sbjct: 181 LVPVGYGIKKLQIMMTVVDDLVSVDNLIEEHLTVEPINEHVQSCD 225


>ref|NP_001077627.1| elongation factor 1-delta 1 [Arabidopsis thaliana]
           gi|332193075|gb|AEE31196.1| elongation factor 1-delta 1
           [Arabidopsis thaliana]
          Length = 260

 Score =  249 bits (637), Expect = 4e-64
 Identities = 126/217 (58%), Positives = 150/217 (69%)
 Frame = +2

Query: 170 NSESGIKKLDEYLLSRSYISGYVASKDDIKVFAALSKPPSSKYVNVSRWYNHIEALLRIA 349
           NS++G+KKLDE+LL+RSYI+GY ASKDDI VFAAL+KPP+S+YVN SRWYNHI+ALLRI+
Sbjct: 8   NSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRIS 67

Query: 350 GVSGDGCGVTVEGFAPVAEVEIXXXXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXX 529
           GVS +G GV VEG AP+ E  +                      LFG             
Sbjct: 68  GVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEER 127

Query: 530 XXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQQEGLFWGASKLVAVGYGI 709
                            VL+D+KPWDDETDMKKLEEAV+S+Q EGLFWGASKLV VGYGI
Sbjct: 128 AASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGI 187

Query: 710 KKLQIMMTIIDDLVSVDSLIEDHLTTEPINEYVQSCD 820
           KKLQI+ TI+DDLVS+D++IE+ LT EPINEYVQSCD
Sbjct: 188 KKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCD 224


>pir||E86426 probable elongation factor 1-beta [imported] - Arabidopsis thaliana
           gi|12320854|gb|AAG50564.1|AC073506_6 elongation factor
           1-beta, putative [Arabidopsis thaliana]
          Length = 242

 Score =  249 bits (637), Expect = 4e-64
 Identities = 126/217 (58%), Positives = 150/217 (69%)
 Frame = +2

Query: 170 NSESGIKKLDEYLLSRSYISGYVASKDDIKVFAALSKPPSSKYVNVSRWYNHIEALLRIA 349
           NS++G+KKLDE+LL+RSYI+GY ASKDDI VFAAL+KPP+S+YVN SRWYNHI+ALLRI+
Sbjct: 8   NSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRIS 67

Query: 350 GVSGDGCGVTVEGFAPVAEVEIXXXXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXX 529
           GVS +G GV VEG AP+ E  +                      LFG             
Sbjct: 68  GVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEER 127

Query: 530 XXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQQEGLFWGASKLVAVGYGI 709
                            VL+D+KPWDDETDMKKLEEAV+S+Q EGLFWGASKLV VGYGI
Sbjct: 128 AASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGI 187

Query: 710 KKLQIMMTIIDDLVSVDSLIEDHLTTEPINEYVQSCD 820
           KKLQI+ TI+DDLVS+D++IE+ LT EPINEYVQSCD
Sbjct: 188 KKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCD 224


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