BLASTX nr result

ID: Bupleurum21_contig00000291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000291
         (1498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266051.1| PREDICTED: uncharacterized protein LOC100265...   184   5e-44
emb|CAN75176.1| hypothetical protein VITISV_016687 [Vitis vinifera]   182   3e-43
gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana ...   170   8e-40
gb|ABA81884.1| nuclear RNA binding protein-like [Solanum tuberosum]   167   7e-39
ref|XP_003521066.1| PREDICTED: uncharacterized protein LOC100791...   162   3e-37

>ref|XP_002266051.1| PREDICTED: uncharacterized protein LOC100265608 [Vitis vinifera]
            gi|296085734|emb|CBI29539.3| unnamed protein product
            [Vitis vinifera]
          Length = 363

 Score =  184 bits (467), Expect = 5e-44
 Identities = 115/254 (45%), Positives = 135/254 (53%), Gaps = 1/254 (0%)
 Frame = -3

Query: 1052 RQPEEGDLEKSSEXXXXXXXXXXXXXXXXXXGFSNGEVAEGERPRRVYERHSGSNRGNEF 873
            R  EEGD  KSSE                  GFSNGEV EGERPRR YER SG+ RGNE 
Sbjct: 113  RPSEEGDTGKSSERRGSGGPRSPYRGGGRRGGFSNGEVGEGERPRRAYERRSGTGRGNEI 172

Query: 872  SKRDGAGRANWGTPADDIAPVNEEPVNDVEKTVDAEKPTGQEDAVDANXXXXXXXXXXXX 693
             KRDGAGR NWGTPAD+IAP NEEP+N+ EK   AEK  G+E A DAN            
Sbjct: 173  -KRDGAGRGNWGTPADEIAPENEEPINETEKNTSAEKQLGEEIAADANKENPVNESEEKE 231

Query: 692  XXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVDLDKDFESMQLLSSKKNEEEIFVKLGS- 516
                                        ERKVD+ KDFE+MQ LSSKK+ +++F+KLGS 
Sbjct: 232  PEDKEMTLEEYQKVLEEKRKALLALKTEERKVDV-KDFEAMQQLSSKKDNDDVFIKLGSE 290

Query: 515  XXXXXXXXXXXXXXXXALSINEFLKPAEGEKFYXXXXXXXXXXXXXXGYSGNMGNNAPAP 336
                            ++SINEFLKPAEGE++Y              G++GN  +N  AP
Sbjct: 291  KDKRKELADKEERAKKSVSINEFLKPAEGERYY-GGRGRGRGRGTRGGFAGNTYSNVAAP 349

Query: 335  AIEDQRQFPTLGAK 294
            +IED  QFPTLG K
Sbjct: 350  SIEDPGQFPTLGGK 363


>emb|CAN75176.1| hypothetical protein VITISV_016687 [Vitis vinifera]
          Length = 363

 Score =  182 bits (461), Expect = 3e-43
 Identities = 114/254 (44%), Positives = 134/254 (52%), Gaps = 1/254 (0%)
 Frame = -3

Query: 1052 RQPEEGDLEKSSEXXXXXXXXXXXXXXXXXXGFSNGEVAEGERPRRVYERHSGSNRGNEF 873
            R  EEGD  KS E                  GFSNGEV EGERPRR YER SG+ RGNE 
Sbjct: 113  RPSEEGDTGKSFERRGSGGPRSPYRGGGRRGGFSNGEVGEGERPRRAYERRSGTGRGNEI 172

Query: 872  SKRDGAGRANWGTPADDIAPVNEEPVNDVEKTVDAEKPTGQEDAVDANXXXXXXXXXXXX 693
             KRDGAGR NWGTPAD+IAP NEEP+N+ EK   AEK  G+E A DAN            
Sbjct: 173  -KRDGAGRGNWGTPADEIAPENEEPINETEKNTSAEKQLGEEIAADANKENPVNESEEKE 231

Query: 692  XXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVDLDKDFESMQLLSSKKNEEEIFVKLGS- 516
                                        ERKVD+ KDFE+MQ LSSKK+ +++F+KLGS 
Sbjct: 232  PEDKEMTLEEYQKVLEEKRKALLALKTEERKVDV-KDFEAMQQLSSKKDNDDVFIKLGSE 290

Query: 515  XXXXXXXXXXXXXXXXALSINEFLKPAEGEKFYXXXXXXXXXXXXXXGYSGNMGNNAPAP 336
                            ++SINEFLKPAEGE++Y              G++GN  +N  AP
Sbjct: 291  KDKRKELADKEERAKKSVSINEFLKPAEGERYY-GGRGRGCGRGTRGGFAGNTYSNVAAP 349

Query: 335  AIEDQRQFPTLGAK 294
            +IED  QFPTLG K
Sbjct: 350  SIEDPGQFPTLGGK 363


>gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana tabacum]
          Length = 299

 Score =  170 bits (431), Expect = 8e-40
 Identities = 113/276 (40%), Positives = 137/276 (49%), Gaps = 4/276 (1%)
 Frame = -3

Query: 1109 DSADXXXXXXXXXXXXXXYRQPEEGDLEKSSEXXXXXXXXXXXXXXXXXXGFSNGEVAEG 930
            +SAD              YR  E+G+  K SE                  GF+NG+ AEG
Sbjct: 26   ESADDENAFGSNNGFSGRYRVQEDGESGKLSERRGGYGGPRGGFHGGRRGGFNNGDAAEG 85

Query: 929  E--RPRRVYERHSGSNRGNEFSKRDGAGRANWGTPADDIAPVNEEPVNDVEKTVDAEKPT 756
            E  RPRRV++R SG+ RGNE+ KR+G+GR NWGTPADDIA   E PVND EK V+AEK  
Sbjct: 86   EGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPADDIAQETEVPVNDGEKIVEAEKEA 145

Query: 755  GQEDAVDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVDLDKDFE 576
            GQE+A D N                                        ERKV+LDK+ E
Sbjct: 146  GQEEAEDTNKDSTAAEPEEKEPEEKEMTLEEYEKLMEEKRKALLALKPEERKVNLDKELE 205

Query: 575  SMQLLSSKKNEEEIFVKLGSXXXXXXXXXXXXXXXXALSINEFLKPAEGEKFYXXXXXXX 396
            SMQLLS+KKN++EIF+KLGS                  SINEFLKPAEGE +        
Sbjct: 206  SMQLLSNKKNDDEIFIKLGSEKEKRKEAVEKARKTQ--SINEFLKPAEGENYSRRGGRGR 263

Query: 395  XXXXXXXGYSGNMGNNA--PAPAIEDQRQFPTLGAK 294
                   G+ G +G N    AP+IED  QFP+L AK
Sbjct: 264  GPGRGRGGFGGGVGGNKSFSAPSIEDVGQFPSLVAK 299


>gb|ABA81884.1| nuclear RNA binding protein-like [Solanum tuberosum]
          Length = 363

 Score =  167 bits (423), Expect = 7e-39
 Identities = 107/254 (42%), Positives = 129/254 (50%), Gaps = 3/254 (1%)
 Frame = -3

Query: 1046 PEEGDLEKSSEXXXXXXXXXXXXXXXXXXGFSNGEVAEGE--RPRRVYERHSGSNRGNEF 873
            PE+G+  K SE                  GF+NG+ AEGE  RPRRV++R SG+ RGNEF
Sbjct: 112  PEDGESGKVSERRGGYGGSRGGFHGGRRGGFNNGDSAEGEGERPRRVFDRRSGTGRGNEF 171

Query: 872  SKRDGAGRANWGTPADDIAPVNEEPVNDVEKTVDAEKPTGQEDAVDANXXXXXXXXXXXX 693
             KR+G+GR NWGT ADDIAP  E PV D EK V+AEK  GQEDA D N            
Sbjct: 172  IKREGSGRGNWGTTADDIAPETEVPVIDGEKIVEAEKQAGQEDAGDTNKESTAAEPEEKE 231

Query: 692  XXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVDLDKDFESMQLLSSKKNEEEIFVKLGSX 513
                                        ERKV+LDK+ +SMQLLS+KKN++EIF+KLG+ 
Sbjct: 232  PEEKEITLEEYEKVMEEKRKALVALKQEERKVNLDKELQSMQLLSNKKNDDEIFIKLGAE 291

Query: 512  XXXXXXXXXXXXXXXALSINEFLKPAEGEKFYXXXXXXXXXXXXXXGYSGNMG-NNAPAP 336
                             SINEFLKPAEGE +Y                 G  G N+  AP
Sbjct: 292  KDKKKEAVEKTKKTK--SINEFLKPAEGESYYRPGGRGRGRGRGRGNGGGYGGINSVSAP 349

Query: 335  AIEDQRQFPTLGAK 294
            +IED  QFP+L  K
Sbjct: 350  SIEDVGQFPSLAVK 363


>ref|XP_003521066.1| PREDICTED: uncharacterized protein LOC100791259 [Glycine max]
          Length = 368

 Score =  162 bits (409), Expect = 3e-37
 Identities = 96/222 (43%), Positives = 118/222 (53%), Gaps = 1/222 (0%)
 Frame = -3

Query: 956 FSNGEVAEGERPRRVYERHSGSNRGNEFSKRDGAGRANWGTPADDIAPVNEEPVNDVEKT 777
           FSNGE  +  RPRR +ERHSG+ RGNEF KR+G+GR NWGT  DDIA V EE VN+ EK 
Sbjct: 149 FSNGETGDEGRPRRAFERHSGTGRGNEF-KREGSGRGNWGTQNDDIAEVTEEVVNETEKV 207

Query: 776 VDAEKPTGQEDAVDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKV 597
           +  EKP G+EDA + N                                         RKV
Sbjct: 208 LADEKPVGEEDAAEGNKDSPANENEEKEPEDKEMTLEEYEKVLEEKRKALQAQKTEARKV 267

Query: 596 DLDKDFESMQLLSSKKNEEEIFVKLGS-XXXXXXXXXXXXXXXXALSINEFLKPAEGEKF 420
           D+ K+F SMQ LS+KK  +EIF+KLGS                 +++I EFLKPAEGE++
Sbjct: 268 DI-KEFASMQPLSNKKENDEIFIKLGSDKDKRKDALEKEEKSKKSVNITEFLKPAEGERY 326

Query: 419 YXXXXXXXXXXXXXXGYSGNMGNNAPAPAIEDQRQFPTLGAK 294
           Y              GYSGN  +NAPAP+IED   FP+LG K
Sbjct: 327 YPGGRGRGRGRGSRGGYSGNAYSNAPAPSIEDPGHFPSLGGK 368


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