BLASTX nr result

ID: Bupleurum21_contig00000258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000258
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase...   133   1e-29
ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase...   133   1e-29
emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]   133   1e-29
ref|XP_004138462.1| PREDICTED: ribulose bisphosphate carboxylase...   133   2e-29
emb|CBI31641.3| unnamed protein product [Vitis vinifera]              130   8e-29

>ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic isoform 2 [Vitis vinifera]
          Length = 440

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/103 (63%), Positives = 79/103 (76%)
 Frame = -3

Query: 311 PSSAFYGSSLKKVNSRFTHQKTSESKTFKIAAVDEGKAAEPKKVDKWGGLAYDISDDQQD 132
           PSSAF+GSSLKKV+SRFTH K +      +A +DE +  E    D+W GLAYD+SDDQQD
Sbjct: 28  PSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEK---DRWKGLAYDVSDDQQD 84

Query: 131 ITRGKGLVDSLFQAPSGAGTHDPIMSSYEYLSTAQKVYSMDNN 3
           ITRGKG+VDSLFQAP  +GTH  +MSSYEYLST  + Y++DNN
Sbjct: 85  ITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNN 127


>ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|297746032|emb|CBI16088.3| unnamed protein product
           [Vitis vinifera]
          Length = 472

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/103 (63%), Positives = 79/103 (76%)
 Frame = -3

Query: 311 PSSAFYGSSLKKVNSRFTHQKTSESKTFKIAAVDEGKAAEPKKVDKWGGLAYDISDDQQD 132
           PSSAF+GSSLKKV+SRFTH K +      +A +DE +  E    D+W GLAYD+SDDQQD
Sbjct: 28  PSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEK---DRWKGLAYDVSDDQQD 84

Query: 131 ITRGKGLVDSLFQAPSGAGTHDPIMSSYEYLSTAQKVYSMDNN 3
           ITRGKG+VDSLFQAP  +GTH  +MSSYEYLST  + Y++DNN
Sbjct: 85  ITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNN 127


>emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]
          Length = 472

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/103 (63%), Positives = 79/103 (76%)
 Frame = -3

Query: 311 PSSAFYGSSLKKVNSRFTHQKTSESKTFKIAAVDEGKAAEPKKVDKWGGLAYDISDDQQD 132
           PSSAF+GSSLKKV+SRFTH K +      +A +DE +  E    D+W GLAYD+SDDQQD
Sbjct: 28  PSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEK---DRWKGLAYDVSDDQQD 84

Query: 131 ITRGKGLVDSLFQAPSGAGTHDPIMSSYEYLSTAQKVYSMDNN 3
           ITRGKG+VDSLFQAP  +GTH  +MSSYEYLST  + Y++DNN
Sbjct: 85  ITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNN 127


>ref|XP_004138462.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 474

 Score =  133 bits (334), Expect = 2e-29
 Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 2/104 (1%)
 Frame = -3

Query: 308 SSAFYGSSLKKVNSRFTHQKTSESKTFKIAAVDEGKAAEPKKV--DKWGGLAYDISDDQQ 135
           SSAF GSSLKK N RF   K S   +FK+ AV E +  E K+   DKW GLA+D+SDDQQ
Sbjct: 25  SSAFLGSSLKKANFRFPSSKVSSGSSFKVVAVAE-EIDEKKQTSKDKWKGLAFDVSDDQQ 83

Query: 134 DITRGKGLVDSLFQAPSGAGTHDPIMSSYEYLSTAQKVYSMDNN 3
           DITRGKG+VD+LFQAPSGAGTHDP++SSYEYLS   + Y+ DNN
Sbjct: 84  DITRGKGMVDTLFQAPSGAGTHDPVLSSYEYLSAGLRQYNFDNN 127


>emb|CBI31641.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  130 bits (328), Expect = 8e-29
 Identities = 66/103 (64%), Positives = 75/103 (72%)
 Frame = -3

Query: 311 PSSAFYGSSLKKVNSRFTHQKTSESKTFKIAAVDEGKAAEPKKVDKWGGLAYDISDDQQD 132
           PSSAF GSSLKKVNSRFTH K S      +A VD+    E    DKW GLA+D SDDQQD
Sbjct: 29  PSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEK---DKWKGLAFDTSDDQQD 85

Query: 131 ITRGKGLVDSLFQAPSGAGTHDPIMSSYEYLSTAQKVYSMDNN 3
           I RGKG+VDSLFQAP  AGTH  +MSSYEY+ST  + Y++DNN
Sbjct: 86  IVRGKGMVDSLFQAPMDAGTHYAVMSSYEYISTGLRQYNLDNN 128


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