BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000250
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]     269   1e-69
dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]       169   2e-39
emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]                 168   2e-39
dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica G...   168   3e-39
dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Grou...   167   5e-39

>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
          Length = 475

 Score =  269 bits (688), Expect = 1e-69
 Identities = 143/235 (60%), Positives = 165/235 (70%), Gaps = 7/235 (2%)
 Frame = -2

Query: 684 PGVLDKAQINLARLYINQKRTEMDTKXXXXXXXXXXXXSLQEQVGVVPHRFQGFFNVKGK 505
           PG LDKAQ  LA LY +QKRT +DTK             LQEQV VVPHRF+GFFN KGK
Sbjct: 199 PGELDKAQRQLAHLYKDQKRTILDTKSPVPVSSSSF---LQEQVMVVPHRFEGFFNAKGK 255

Query: 504 ENILCTRNLVPGEALYGEKLIHVQNEDQTEVEYRVWDPLRSKLGAAIHCGVTNMWIKPGS 325
           +NILCTRNLVPGEALYGEKLIHVQNED TEVEYRV DP RSKLGAAI  GVTN+WIKPGS
Sbjct: 256 KNILCTRNLVPGEALYGEKLIHVQNEDGTEVEYRVCDPRRSKLGAAILGGVTNIWIKPGS 315

Query: 324 RVLYMGNVCGLTVSNXXXXXXXXXXXXXXGFSDDVAHMAGKRPNVLTINGKGCYHIHYRM 145
           RV+Y+G VCG+TVS+              G SDDV H+ GKRPNV+TI    CY+ HYRM
Sbjct: 316 RVMYVGKVCGVTVSDLSDIVGLDGLVYVVGNSDDVTHVEGKRPNVVTIIENDCYYCHYRM 375

Query: 144 LLGMVDVIF-------AEIYHHPEQQFCKEGNMVVNNARFYLRAGGHYMISRQAN 1
           +LGMVD +F        EIY  P + + ++G  +VNN  FYL+ GGHYMI  +A+
Sbjct: 376 VLGMVDAVFGEIDHPLGEIYRLPTKVY-RDGRFIVNNVHFYLKTGGHYMICTKAD 429



 Score =  134 bits (337), Expect = 5e-29
 Identities = 65/120 (54%), Positives = 86/120 (71%)
 Frame = -3

Query: 1190 RDAKLTLADIDRVRGVEVMPLYLLFECATGYALFFPHGISQVEMKKFEAVEEYVNRSDQP 1011
            ++ +LT+ DI R RG EV PL+   ECATGYALF   GI+ ++M K++  EEY+NRSD P
Sbjct: 48   KNGELTIGDIARARGREVFPLHFFVECATGYALFLARGINDIDMNKYQPAEEYINRSDTP 107

Query: 1010 FELIAYMPFSSDDDALLQINAISKSNVTEKLQMFLEDNIPSPTYRYRLGTCDSVLGSRIL 831
            FEL AY+PFSS  +ALLQ+NAIS S+VTE L  F++ N   P +R+ L T D VLG +I+
Sbjct: 108  FELKAYLPFSSLGEALLQMNAISNSSVTEMLIKFIQKNFEPPFHRHVLTTADPVLGEKIV 167


>dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
          Length = 314

 Score =  169 bits (427), Expect = 2e-39
 Identities = 94/190 (49%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
 Frame = -2

Query: 558 QVGVVPHRFQGFFNVKGKENILCTRNLVPGEALYGEKLIHVQNEDQTEVEYRVWDPLRSK 379
           +V V PHR  G F  KGKE+ LCT+NLVPGEA+Y EK I VQNED T+VEYRVW+P RSK
Sbjct: 75  KVVVEPHRHGGVFIAKGKEDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSK 134

Query: 378 LGAAIHCGVTNMWIKPGSRVLYMGNVCGLTVSNXXXXXXXXXXXXXXGFSD----DVAHM 211
           L AAI  GV ++WIKPG++VLY+G   G TVS+               FS     D+ +M
Sbjct: 135 LAAAILGGVDDIWIKPGAKVLYLGAASGTTVSHVSDLVGPGGVVYAVEFSHRSGRDLVNM 194

Query: 210 AGKRPNVLTINGKGCYHIHYRMLLGMVDVIFAEIYHHPEQQFCKEGNMVVNNARFYLRAG 31
           A KR NV+ I     +   YRML+GMVDVIF+++   P+Q       ++  NA ++L+AG
Sbjct: 195 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDV-AQPDQ-----ARILALNASYFLKAG 248

Query: 30  GHYMISRQAN 1
           GH++IS +AN
Sbjct: 249 GHFVISIKAN 258


>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score =  168 bits (426), Expect = 2e-39
 Identities = 93/190 (48%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
 Frame = -2

Query: 558 QVGVVPHRFQGFFNVKGKENILCTRNLVPGEALYGEKLIHVQNEDQTEVEYRVWDPLRSK 379
           +V V PHR  G F  KGKE+ LCT+NLVPGEA+Y EK I VQNED T+VEYRVW+P RSK
Sbjct: 75  KVVVEPHRHGGVFIAKGKEDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSK 134

Query: 378 LGAAIHCGVTNMWIKPGSRVLYMGNVCGLTVSNXXXXXXXXXXXXXXGFSD----DVAHM 211
           L AA+  GV ++WIKPG++VLY+G   G TVS+               FS     D+ +M
Sbjct: 135 LAAAVLGGVDDIWIKPGAKVLYLGAASGTTVSHVSDLVGPGGVVYAVEFSHRSGRDLVNM 194

Query: 210 AGKRPNVLTINGKGCYHIHYRMLLGMVDVIFAEIYHHPEQQFCKEGNMVVNNARFYLRAG 31
           A KR NV+ I     +   YRML+GMVDVIF+++   P+Q       ++  NA ++L+AG
Sbjct: 195 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDV-AQPDQ-----ARILALNASYFLKAG 248

Query: 30  GHYMISRQAN 1
           GH++IS +AN
Sbjct: 249 GHFVISIKAN 258


>dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica Group]
           gi|222630379|gb|EEE62511.1| hypothetical protein
           OsJ_17309 [Oryza sativa Japonica Group]
          Length = 309

 Score =  168 bits (425), Expect = 3e-39
 Identities = 91/190 (47%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
 Frame = -2

Query: 558 QVGVVPHRFQGFFNVKGKENILCTRNLVPGEALYGEKLIHVQNEDQTEVEYRVWDPLRSK 379
           +V VVPH+  G F  K KE+ LCT+N+VPGE++YGEK I VQNED T+VEYRVW+P RSK
Sbjct: 70  KVVVVPHKHDGVFIAKAKEDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNPFRSK 129

Query: 378 LGAAIHCGVTNMWIKPGSRVLYMGNVCGLTVSNXXXXXXXXXXXXXXGFSD----DVAHM 211
           L AA+  GV N+WI PG+RVLY+G   G TVS+               FS     D+ +M
Sbjct: 130 LAAAVLGGVDNIWIAPGTRVLYLGGASGTTVSHVSDIVGPTGLVYAVEFSHRSGRDLVNM 189

Query: 210 AGKRPNVLTINGKGCYHIHYRMLLGMVDVIFAEIYHHPEQQFCKEGNMVVNNARFYLRAG 31
           A KR NV+ I     +   YRML+GMVDVIF+++   P+Q       ++  NA ++L+ G
Sbjct: 190 AKKRTNVIPIIEDARHPARYRMLVGMVDVIFSDV-AQPDQ-----ARILALNASYFLKNG 243

Query: 30  GHYMISRQAN 1
           GH++IS +AN
Sbjct: 244 GHFVISIKAN 253


>dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Group]
           gi|48716513|dbj|BAD23118.1| putative fibrillarin [Oryza
           sativa Japonica Group] gi|125541665|gb|EAY88060.1|
           hypothetical protein OsI_09490 [Oryza sativa Indica
           Group] gi|125584186|gb|EAZ25117.1| hypothetical protein
           OsJ_08915 [Oryza sativa Japonica Group]
          Length = 306

 Score =  167 bits (423), Expect = 5e-39
 Identities = 91/190 (47%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
 Frame = -2

Query: 558 QVGVVPHRFQGFFNVKGKENILCTRNLVPGEALYGEKLIHVQNEDQTEVEYRVWDPLRSK 379
           +V VVPH+  G F  K KE+ LCT+N+VPGE++YGEK I VQNED T+VEYRVW+P RSK
Sbjct: 67  KVVVVPHKHNGVFIAKAKEDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNPFRSK 126

Query: 378 LGAAIHCGVTNMWIKPGSRVLYMGNVCGLTVSNXXXXXXXXXXXXXXGFSD----DVAHM 211
           L AA+  GV N+WI PG+RVLY+G   G TVS+               FS     D+ +M
Sbjct: 127 LAAAVLGGVDNIWIAPGTRVLYLGAASGTTVSHVSDIVGPTGLVYAVEFSHRSGRDLVNM 186

Query: 210 AGKRPNVLTINGKGCYHIHYRMLLGMVDVIFAEIYHHPEQQFCKEGNMVVNNARFYLRAG 31
           A KR NV+ I     +   YRML+GMVDVIF+++   P+Q       ++  NA ++L+ G
Sbjct: 187 AKKRTNVIPIIEDARHPARYRMLVGMVDVIFSDV-AQPDQ-----ARILALNASYFLKNG 240

Query: 30  GHYMISRQAN 1
           GH++IS +AN
Sbjct: 241 GHFVISIKAN 250