BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000247
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27434.3| unnamed protein product [Vitis vinifera]              112   1e-22
ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...   111   4e-22
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...   110   1e-21
ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata sub...   108   3e-21
ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein...   108   4e-21

>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  112 bits (281), Expect = 1e-22
 Identities = 101/339 (29%), Positives = 165/339 (48%), Gaps = 17/339 (5%)
 Frame = -2

Query: 1205 QEYSDEVVNDFVDQWIPLFSRKGVKQLTLEE-DDELGQFTAHNFSSLQLTHFRLTHAHVS 1029
            + YSD      +D WI   S   +++ TL     E  +  ++ F+ L L H +L     +
Sbjct: 132  ESYSD------IDHWINFLSNHDIQEFTLSRAKTEHYKLPSYFFTFLHLRHLKLRGC--A 183

Query: 1028 FPCKPALGGFTNLINLQL---VLVTSAFGRRDFDCPVLEKLTLIICTGILPID---FRAP 867
            F   P   GF+ LI+LQL   ++    FG     CP+LE+LT+   +G +P D     AP
Sbjct: 184  FRPPPRFKGFSKLISLQLEDILMDAETFGSLISSCPLLEQLTV---SGYIPYDSLEISAP 240

Query: 866  NLKCLHQVYGD--EITLEDALAGFENLTEYSCILQYFPEMQTETYNVVQVLCSLHKIEKF 693
            NLK      GD   I  ++ L   E +T   C +     ++ ++ N++++  SL  +EK 
Sbjct: 241  NLKSF-SFTGDFGSICFKNTLLLAE-VTVALCRVN--KNVKHQSSNLIKIGRSLPAVEKL 296

Query: 692  SAGMDFLMYLADGVFPDRLSKPMNYLKTLSICDVNFADLSEVSCLLFLIRSAPNLRELHI 513
                 FL +LA G  P RL    N LK L + +++F++L E+ C L LI S+PNL EL +
Sbjct: 297  YLEGYFLEFLALGNVPKRLPILFNNLKVLHLDEMDFSNLDEILCSLCLITSSPNLEELRV 356

Query: 512  MHSEGYVGEDPKDYWIEDSEDCTVDH-----LEMVTFSNFKCLQAELELVKFLLGHTPLL 348
            +    Y G+  +D  +E      + H     L+ V        + ELE +KF+L  +P L
Sbjct: 357  V---AYAGDIARDAVVEYFGTQNLSHHSLKRLQKVKMEEISNFEPELEFIKFILASSPSL 413

Query: 347  KTMSFHCSEDIKSD---AMTEVMLQHYTASSRAQIKHLE 240
            + M    SED   +    M + +++   AS +A++ +L+
Sbjct: 414  EEMEVLRSEDTVGEDERKMWKELMRFRRASPKAEVIYLQ 452


>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  111 bits (277), Expect = 4e-22
 Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 15/294 (5%)
 Frame = -2

Query: 1172 VDQWIPLFSRKGVKQLTLE-EDDELGQFTAHNFSSLQLTHFRLTHAHVSFPCKPALGGFT 996
            +DQWI   SR  +K+L LE  + E  +  +  F+  +LT   L       P  P   GF 
Sbjct: 101  IDQWILFLSRSDIKELVLELGEGEWFRVPSCLFNCKKLTCLELFRCEFDPP--PTFKGFL 158

Query: 995  NLINL---QLVLVTSAFGRRDFDCPVLEKLTLIICTGILPIDFRAPNLK--CLHQVYGDE 831
             L +L   Q+++   A       CP+LE L L      L ++ RAPNLK  CL   + D 
Sbjct: 159  CLRSLSLHQVLVAPEAIESLISGCPLLESLALSYFDS-LALNIRAPNLKYLCLEGEFTD- 216

Query: 830  ITLEDALAGFENLTEYSCILQYFPEM-----QTETYNVVQVLCSLHKIEKFSAGMDFLMY 666
            I LE+       L   S  +    EM     Q+   N ++ L  + ++E+ +  + F  Y
Sbjct: 217  ICLENTPL----LVAMSVAMYMNDEMAECFEQSSKCNFIKFLGGVPRLERLAGHIYFTKY 272

Query: 665  LADGVFPDRLSKPMNYLKTLSICDVNFADLSEVSCLLFLIRSAPNLRELHIMHSEGYVG- 489
            L+ G +P  L+   ++LK + +  V+F D+ E+  +L LI ++PNL+EL I  S   V  
Sbjct: 273  LSIGDYPGSLAITYSHLKIIELYQVSFEDMKEIRVVLRLIMNSPNLKELRISGSSTAVAS 332

Query: 488  -EDPK-DYWIEDS-EDCTVDHLEMVTFSNFKCLQAELELVKFLLGHTPLLKTMS 336
             E P  ++W ++  +DCT   L++V  ++   +  E+E +KFLL ++P+L+TMS
Sbjct: 333  VEAPNLEFWAKECPKDCTFKQLKVVKMTDMSGVPHEMEFMKFLLANSPVLETMS 386


>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 421

 Score =  110 bits (274), Expect = 1e-21
 Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 12/291 (4%)
 Frame = -2

Query: 1172 VDQWIPLFSRKGVKQLTLE-EDDELGQFTAHNFSSLQLTHFRLTHAHVSFPCKPALGGFT 996
            +DQW+   SR  +K+L LE  + E  +  +  F+  +LT   LT      P  P   GF 
Sbjct: 101  IDQWLLFLSRSDIKELVLELGEGEWFRVPSCLFNCKKLTRLELTRCEFDPP--PNFKGFL 158

Query: 995  NL--INLQLVLVT-SAFGRRDFDCPVLEKLTLIICTGILPIDFRAPNLK--CLHQVYGDE 831
             L  +NL  VLV   A       CP+LE L+L     ++ ++ RAPNLK  CL   + D 
Sbjct: 159  CLKSLNLYQVLVAPEAIESLISGCPLLESLSLSYFDSLV-LNVRAPNLKYLCLEGEFKDI 217

Query: 830  ITLEDALAGFENLTEYSC--ILQYFPEMQTETYNVVQVLCSLHKIEKFSAGMDFLMYLAD 657
                  L    ++  Y    I ++F   Q+ + N ++ L  + ++E+    + F  YL+ 
Sbjct: 218  CLENTPLLVAMSIAMYMTEDIAEHFE--QSSSCNFIKFLGGVPRLERLIGHIYFTKYLSI 275

Query: 656  GVFPDRLSKPMNYLKTLSICDVNFADLSEVSCLLFLIRSAPNLRELHIMHSEGYVG--ED 483
            G +P R     + LK + +  V+F D+ E+  +L LI ++PNL+EL I  S   +   E 
Sbjct: 276  GDYPGRHPITYSCLKVIELYQVSFEDMKEIHVVLRLITNSPNLKELQISGSSNTLAAVEA 335

Query: 482  PK-DYWIEDS-EDCTVDHLEMVTFSNFKCLQAELELVKFLLGHTPLLKTMS 336
            P  D+W+++   +CT + L +V  ++   +  E+E +KFLL ++P+L+ MS
Sbjct: 336  PDLDFWLKECPRNCTFEKLGVVKLTDMSGVPQEMEFIKFLLANSPVLEMMS 386


>ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338601|gb|EFH69018.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score =  108 bits (270), Expect = 3e-21
 Identities = 95/324 (29%), Positives = 157/324 (48%), Gaps = 13/324 (4%)
 Frame = -2

Query: 1172 VDQWIPLFSRKGVKQLTLEEDDELGQFTAHNFSSLQLTHFRLTHAHVSFPCKPALGGFTN 993
            +DQW+   SR G+K+L LE  +   +  +  F+ L+LT   L H     P      GF++
Sbjct: 99   IDQWLLFLSRNGIKELVLELGEGEFRVPSCLFNCLKLTRLELCHCEFDPP--QYFKGFSS 156

Query: 992  LINL---QLVLVTSAFGRRDFDCPVLEKLTLIICTGILPIDFRAPNLKCLHQVYGDEITL 822
            L +L   Q+++           CP+LE L+L     ++ +   APNL  L   Y D    
Sbjct: 157  LKSLNLHQILVAPEVIESLISGCPLLEFLSLSYFDSLV-LSISAPNLMYL---YLDGEFK 212

Query: 821  EDALAGFENLTEYSCILQYFPEM----QTETYNVVQVLCSLHKIEKFSAGMDFLMYLADG 654
            +  L     L   S  +    ++    Q+  YN+V+ L  +  +EK    + F  YL+ G
Sbjct: 213  DIFLENTPKLVAISVSMYMHEDVTDFEQSSDYNLVKFLGGVPLLEKLVGYIYFTKYLSIG 272

Query: 653  VFPDRLSKPMNYLKTLSICDVNFADLSEVSCLLFLIRSAPNLRELHIMHSEGY---VGED 483
              P RL     +LKT+ +  V+F D +E+  LL L+  +PNL+EL +  S      + E+
Sbjct: 273  DDPGRLPITYIHLKTIELYQVSFEDANEILVLLRLVTHSPNLKELKVSASPIQLFPLEEE 332

Query: 482  PKDYWIEDSEDCTVDHLEMVTFSNFKCLQAELELVKFLLGHTPLLKTMSFHCS---EDIK 312
              D +  D  D  +  LE V  ++   ++ ELE ++FLLG +P+L+T+    S   ++ K
Sbjct: 333  GFDLFERDYFDYKLPSLETVKMTDVSGIRNELEFIRFLLGTSPVLETVVVSSSLIDKEAK 392

Query: 311  SDAMTEVMLQHYTASSRAQIKHLE 240
             D + E +L++   S RAQ   L+
Sbjct: 393  MDMVIE-LLRYPRVSPRAQFLFLQ 415


>ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein [Arabidopsis
            thaliana] gi|75263255|sp|Q9FZ70.1|FDL1_ARATH RecName:
            Full=F-box/FBD/LRR-repeat protein At1g13570
            gi|9802755|gb|AAF99824.1|AC027134_6 Unknown protein
            [Arabidopsis thaliana] gi|111074352|gb|ABH04549.1|
            At1g13570 [Arabidopsis thaliana]
            gi|332190914|gb|AEE29035.1| F-box/FBD/LRR-repeat protein
            containing protein [Arabidopsis thaliana]
          Length = 416

 Score =  108 bits (269), Expect = 4e-21
 Identities = 97/324 (29%), Positives = 156/324 (48%), Gaps = 13/324 (4%)
 Frame = -2

Query: 1172 VDQWIPLFSRKGVKQLTLEEDDELGQFTAHNFSSLQLTHFRLTHAHVSFPCKPALGGFTN 993
            +DQW+   SR G+K+L L+  +   +  A  F+ L+LT   L H     P      GF+ 
Sbjct: 99   IDQWLLFLSRNGIKELVLKLGEGEFRVPACLFNCLKLTCLELCHCEFDPP--QYFKGFSY 156

Query: 992  LINL---QLVLVTSAFGRRDFDCPVLEKLTLIICTGILPIDFRAPNLKCLHQVYGDEITL 822
            L +L   Q+++           CP+LE L+L     ++ +   APNL  L   Y D    
Sbjct: 157  LKSLNLHQILVAPEVIESLISGCPLLEFLSLSYFDSLV-LSISAPNLMYL---YLDGEFK 212

Query: 821  EDALAGFENLTEYSCILQYFPEM----QTETYNVVQVLCSLHKIEKFSAGMDFLMYLADG 654
            +  L     L   S  +    ++    Q+  YN+V+ L  +  +EK    + F  YL+ G
Sbjct: 213  DIFLENTPKLVAISVSMYMHEDVTDFEQSSDYNLVKFLGGVPLLEKLVGYIYFTKYLSIG 272

Query: 653  VFPDRLSKPMNYLKTLSICDVNFADLSEVSCLLFLIRSAPNLRELHIMHSEGY---VGED 483
              P RL     +LKT+ +  V F D  EV  LL L+  +PNL+EL +  S      + E+
Sbjct: 273  DDPGRLPLTYIHLKTIELYQVCFEDADEVLVLLRLVTHSPNLKELKVSASPVQPFPLEEE 332

Query: 482  PKDYWIEDSEDCTVDHLEMVTFSNFKCLQAELELVKFLLGHTPLLKTMSFHCS---EDIK 312
              D +  D  D  +  LE V  ++   ++ ELE ++FLLG +P+L+T++   S   +D K
Sbjct: 333  GFDLFERDYFDYKLPSLESVKITDASGIRYELEFIRFLLGTSPVLETVTVSSSLSDKDAK 392

Query: 311  SDAMTEVMLQHYTASSRAQIKHLE 240
             D + E +L++   S RAQ+  L+
Sbjct: 393  MDMVIE-LLRYPRVSPRAQLLFLQ 415