BLASTX nr result

ID: Bupleurum21_contig00000207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000207
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE62065.1| hypothetical protein OsJ_16849 [Oryza sativa Japo...   149   3e-34
ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group] g...   149   3e-34
gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza...   149   3e-34
emb|CBI31649.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   144   1e-32

>gb|EEE62065.1| hypothetical protein OsJ_16849 [Oryza sativa Japonica Group]
          Length = 243

 Score =  149 bits (377), Expect = 3e-34
 Identities = 75/158 (47%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2   SLPTVRISLGHVISDSHCAVCTEPFEANTMARELPCKHIYHSDCILPWLKLRNSCPVCRH 181
           S+PTV I+  HV +DSHCAVC EPFE    ARE+PC HIYH DCILPWL LRNSCPVCRH
Sbjct: 36  SMPTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRH 95

Query: 182 ELQPETAEVDTLSAENGEESMGLIIWRLPRGGYAIGRFXXXXXXXXXXVASNYNEIEDDD 361
           E+  + A     +A   EE++GL IWRLP GG+A+GRF          +   Y E++   
Sbjct: 96  EMPTDAARPRPSNAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGF 155

Query: 362 VNDGSP--XXXXXXXXXXXXXXXXXHAFRNILSFFGRS 469
            N G+P                     FRN+ S FGRS
Sbjct: 156 NNGGAPRRISWGSRQSRSTERSAIRRIFRNVFSCFGRS 193


>ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group]
           gi|52353630|gb|AAU44196.1| putative ring-H2 finger
           protein [Oryza sativa Japonica Group]
           gi|255675945|dbj|BAF16351.2| Os05g0110000 [Oryza sativa
           Japonica Group]
          Length = 333

 Score =  149 bits (377), Expect = 3e-34
 Identities = 75/158 (47%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2   SLPTVRISLGHVISDSHCAVCTEPFEANTMARELPCKHIYHSDCILPWLKLRNSCPVCRH 181
           S+PTV I+  HV +DSHCAVC EPFE    ARE+PC HIYH DCILPWL LRNSCPVCRH
Sbjct: 126 SMPTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRH 185

Query: 182 ELQPETAEVDTLSAENGEESMGLIIWRLPRGGYAIGRFXXXXXXXXXXVASNYNEIEDDD 361
           E+  + A     +A   EE++GL IWRLP GG+A+GRF          +   Y E++   
Sbjct: 186 EMPTDAARPRPSNAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGF 245

Query: 362 VNDGSP--XXXXXXXXXXXXXXXXXHAFRNILSFFGRS 469
            N G+P                     FRN+ S FGRS
Sbjct: 246 NNGGAPRRISWGSRQSRSTERSAIRRIFRNVFSCFGRS 283


>gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza sativa]
          Length = 386

 Score =  149 bits (377), Expect = 3e-34
 Identities = 75/158 (47%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2   SLPTVRISLGHVISDSHCAVCTEPFEANTMARELPCKHIYHSDCILPWLKLRNSCPVCRH 181
           S+PTV I+  HV +DSHCAVC EPFE    ARE+PC HIYH DCILPWL LRNSCPVCRH
Sbjct: 179 SMPTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRH 238

Query: 182 ELQPETAEVDTLSAENGEESMGLIIWRLPRGGYAIGRFXXXXXXXXXXVASNYNEIEDDD 361
           E+  + A     +A   EE++GL IWRLP GG+A+GRF          +   Y E++   
Sbjct: 239 EMPTDAARPRPSNAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGF 298

Query: 362 VNDGSP--XXXXXXXXXXXXXXXXXHAFRNILSFFGRS 469
            N G+P                     FRN+ S FGRS
Sbjct: 299 NNGGAPRRISWGSRQSRSTERSAIRRIFRNVFSCFGRS 336


>emb|CBI31649.3| unnamed protein product [Vitis vinifera]
          Length = 761

 Score =  144 bits (364), Expect = 1e-32
 Identities = 71/156 (45%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
 Frame = +2

Query: 2   SLPTVRISLGHVISDSHCAVCTEPFEANTMARELPCKHIYHSDCILPWLKLRNSCPVCRH 181
           ++PT+ I+  HV ++ HCAVC EPFE    ARE+PCKHIYHSDCILPWL LRNSCPVCRH
Sbjct: 144 AMPTIEIADAHVNTEHHCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRH 203

Query: 182 ELQPETAEVDTLSAENGEESMGLIIWRLPRGGYAIGRFXXXXXXXXXXVASNYNEIEDDD 361
           EL  E       + +  EE++GL IWRLP GG+A+GRF          +   Y E++   
Sbjct: 204 ELPSEERNSPESNEQTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGF 263

Query: 362 VNDGSP--XXXXXXXXXXXXXXXXXHAFRNILSFFG 463
            N G+P                     FRN+L+ FG
Sbjct: 264 NNGGAPRRISWTSRTNRNQERGGLGRMFRNLLACFG 299


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score =  144 bits (364), Expect = 1e-32
 Identities = 71/156 (45%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
 Frame = +2

Query: 2   SLPTVRISLGHVISDSHCAVCTEPFEANTMARELPCKHIYHSDCILPWLKLRNSCPVCRH 181
           ++PT+ I+  HV ++ HCAVC EPFE    ARE+PCKHIYHSDCILPWL LRNSCPVCRH
Sbjct: 159 AMPTIEIADAHVNTEHHCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRH 218

Query: 182 ELQPETAEVDTLSAENGEESMGLIIWRLPRGGYAIGRFXXXXXXXXXXVASNYNEIEDDD 361
           EL  E       + +  EE++GL IWRLP GG+A+GRF          +   Y E++   
Sbjct: 219 ELPSEERNSPESNEQTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGF 278

Query: 362 VNDGSP--XXXXXXXXXXXXXXXXXHAFRNILSFFG 463
            N G+P                     FRN+L+ FG
Sbjct: 279 NNGGAPRRISWTSRTNRNQERGGLGRMFRNLLACFG 314


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