BLASTX nr result
ID: Bupleurum21_contig00000199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000199
(1771 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI32743.3| unnamed protein product [Vitis vinifera] 736 0.0
ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containi... 736 0.0
ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containi... 712 0.0
ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containi... 705 0.0
ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 684 0.0
>emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 736 bits (1901), Expect = 0.0
Identities = 363/469 (77%), Positives = 419/469 (89%)
Frame = +1
Query: 1 TANRFFEDMKTREILPDVVTYNSMINGYYRVNKVEEAEKYFVEMKEKKIDPTVITYTTMI 180
TANRFFE+MK R I PDVVTYN+MINGYYR+ K+EEAEK+FVEMK + I+PTVI+YTTMI
Sbjct: 275 TANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMI 334
Query: 181 KGYVAAGKVDEALRLLEDMKSVGIKPNDITYSTLLPGLCDSGKMSDARLILKEMVEKYIA 360
KGYV+ G+VD+ LRL E+MKS GIKPN +TYSTLLPGLCD KM +A+ ++KEMVE+YIA
Sbjct: 335 KGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIA 394
Query: 361 PTDNSIFMRLMSSQCKVGDLDAAADVLKAMIRLSIPTEAGHYGILLEHFCKAGVYDRAVK 540
P DNSIFMRL++ QCK G LDAAADVLKAMIRLSIPTEAGHYG+L+E+FCK+GVYDRAVK
Sbjct: 395 PKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVK 454
Query: 541 LLDKVIEKEIVLRQQSVSEMKPDAYNPMIEYLCNNGKTGKAETLFRQLMKVGVQDPAAFN 720
LLDK+IEKEI+LR Q+ EM+ YN +IEYLCN+G+T KAETLFRQLMK GVQDP AFN
Sbjct: 455 LLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFN 514
Query: 721 NLIRGHSKEGNPDSASELAKIMVRRKIPTEASAYKLLIESYLRKGEPADAKSALDGMIEN 900
NLIRGHSKEG P+SA E+ KIM RR++P EA AY+LLIES+L+KGEPADAK+ALDGMIEN
Sbjct: 515 NLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIEN 574
Query: 901 GHLPDSSLYRSVIESLFEDGRVQTASRVMNTMLEKGVKEHMDLVAKILEALLLRGHVEEA 1080
GH+PDSSL+RSV+ESLFEDGR+QTASRVMN M+EKGVKE+MDLVAKILEALLLRGHVEEA
Sbjct: 575 GHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEA 634
Query: 1081 IGRIELLLKCGCAPDADSLLSVLCEKSKTIAALKLLDFCLERDCDIDFSSYEKVLDALIT 1260
+GRI+LL+ GC PD D LLSVLC K KTIAALKLLDF LERD +I FSSYE VLDAL+T
Sbjct: 635 LGRIDLLMNNGCEPDFDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLT 694
Query: 1261 AGKTLNAYSILCKIMEKGGTTDWSCCEELIKSLNAQGNTKQADVLSRMI 1407
AGKTLNAYSILCKIM+KGG TDWS C++LI+SLN +GNTKQAD+LSRMI
Sbjct: 695 AGKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADILSRMI 743
>ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 736 bits (1901), Expect = 0.0
Identities = 363/469 (77%), Positives = 419/469 (89%)
Frame = +1
Query: 1 TANRFFEDMKTREILPDVVTYNSMINGYYRVNKVEEAEKYFVEMKEKKIDPTVITYTTMI 180
TANRFFE+MK R I PDVVTYN+MINGYYR+ K+EEAEK+FVEMK + I+PTVI+YTTMI
Sbjct: 275 TANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMI 334
Query: 181 KGYVAAGKVDEALRLLEDMKSVGIKPNDITYSTLLPGLCDSGKMSDARLILKEMVEKYIA 360
KGYV+ G+VD+ LRL E+MKS GIKPN +TYSTLLPGLCD KM +A+ ++KEMVE+YIA
Sbjct: 335 KGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIA 394
Query: 361 PTDNSIFMRLMSSQCKVGDLDAAADVLKAMIRLSIPTEAGHYGILLEHFCKAGVYDRAVK 540
P DNSIFMRL++ QCK G LDAAADVLKAMIRLSIPTEAGHYG+L+E+FCK+GVYDRAVK
Sbjct: 395 PKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVK 454
Query: 541 LLDKVIEKEIVLRQQSVSEMKPDAYNPMIEYLCNNGKTGKAETLFRQLMKVGVQDPAAFN 720
LLDK+IEKEI+LR Q+ EM+ YN +IEYLCN+G+T KAETLFRQLMK GVQDP AFN
Sbjct: 455 LLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFN 514
Query: 721 NLIRGHSKEGNPDSASELAKIMVRRKIPTEASAYKLLIESYLRKGEPADAKSALDGMIEN 900
NLIRGHSKEG P+SA E+ KIM RR++P EA AY+LLIES+L+KGEPADAK+ALDGMIEN
Sbjct: 515 NLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIEN 574
Query: 901 GHLPDSSLYRSVIESLFEDGRVQTASRVMNTMLEKGVKEHMDLVAKILEALLLRGHVEEA 1080
GH+PDSSL+RSV+ESLFEDGR+QTASRVMN M+EKGVKE+MDLVAKILEALLLRGHVEEA
Sbjct: 575 GHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEA 634
Query: 1081 IGRIELLLKCGCAPDADSLLSVLCEKSKTIAALKLLDFCLERDCDIDFSSYEKVLDALIT 1260
+GRI+LL+ GC PD D LLSVLC K KTIAALKLLDF LERD +I FSSYE VLDAL+T
Sbjct: 635 LGRIDLLMNNGCEPDFDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLT 694
Query: 1261 AGKTLNAYSILCKIMEKGGTTDWSCCEELIKSLNAQGNTKQADVLSRMI 1407
AGKTLNAYSILCKIM+KGG TDWS C++LI+SLN +GNTKQAD+LSRMI
Sbjct: 695 AGKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADILSRMI 743
>ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230-like
[Glycine max]
Length = 733
Score = 712 bits (1838), Expect = 0.0
Identities = 352/469 (75%), Positives = 413/469 (88%)
Frame = +1
Query: 1 TANRFFEDMKTREILPDVVTYNSMINGYYRVNKVEEAEKYFVEMKEKKIDPTVITYTTMI 180
TA RF+EDMK+R ILPDVVTYN++INGY+R KV+EAEK FVEMK + I P VI++TTM+
Sbjct: 245 TAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVISFTTML 304
Query: 181 KGYVAAGKVDEALRLLEDMKSVGIKPNDITYSTLLPGLCDSGKMSDARLILKEMVEKYIA 360
KGYVAAG++D+AL++ E+MK G+KPN +T+STLLPGLCD+ KM++AR +L EMVE+YIA
Sbjct: 305 KGYVAAGRIDDALKVFEEMKGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEMVERYIA 364
Query: 361 PTDNSIFMRLMSSQCKVGDLDAAADVLKAMIRLSIPTEAGHYGILLEHFCKAGVYDRAVK 540
P DN++FM++MS QCK GDLDAAADVLKAM+RLSIPTEAGHYG+L+E FCKA VYD+A K
Sbjct: 365 PKDNALFMKMMSCQCKAGDLDAAADVLKAMVRLSIPTEAGHYGVLIESFCKANVYDKAEK 424
Query: 541 LLDKVIEKEIVLRQQSVSEMKPDAYNPMIEYLCNNGKTGKAETLFRQLMKVGVQDPAAFN 720
LLDK+IEKEIVLR Q+ SEM+P AYN MI YLC +G+TGKAET FRQL+K GVQD AFN
Sbjct: 425 LLDKLIEKEIVLRPQNDSEMEPSAYNLMIGYLCEHGRTGKAETFFRQLLKKGVQDSVAFN 484
Query: 721 NLIRGHSKEGNPDSASELAKIMVRRKIPTEASAYKLLIESYLRKGEPADAKSALDGMIEN 900
NLIRGHSKEGNPDSA E+ KIM RR + + +Y+LLIESYLRKGEPADAK+ALDGM+E+
Sbjct: 485 NLIRGHSKEGNPDSAFEIMKIMGRRGVARDVDSYRLLIESYLRKGEPADAKTALDGMLES 544
Query: 901 GHLPDSSLYRSVIESLFEDGRVQTASRVMNTMLEKGVKEHMDLVAKILEALLLRGHVEEA 1080
GHLP+SSLYRSV+ESLF+DGRVQTASRVM +M+EKG KE+MDLV KILEALLLRGHVEEA
Sbjct: 545 GHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGAKENMDLVLKILEALLLRGHVEEA 604
Query: 1081 IGRIELLLKCGCAPDADSLLSVLCEKSKTIAALKLLDFCLERDCDIDFSSYEKVLDALIT 1260
+GRI+LL+ GC PD D LLSVLCEK KTIAALKLLDF LERDC IDFS Y+KVLDAL+
Sbjct: 605 LGRIDLLMHNGCEPDFDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALLA 664
Query: 1261 AGKTLNAYSILCKIMEKGGTTDWSCCEELIKSLNAQGNTKQADVLSRMI 1407
AGKTLNAYSILCKI+EKGG+TDWS +ELIKSLN +GNTKQADVLSRMI
Sbjct: 665 AGKTLNAYSILCKILEKGGSTDWSSRDELIKSLNQEGNTKQADVLSRMI 713
>ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230-like
[Glycine max]
Length = 738
Score = 705 bits (1820), Expect = 0.0
Identities = 351/474 (74%), Positives = 415/474 (87%), Gaps = 5/474 (1%)
Frame = +1
Query: 1 TANRFFEDMKTREILPDVVTYNSMINGYYRVNKVEEAEKYFVEMKEKKIDPTVITYTTMI 180
TA RF+EDMK+R ILPDVVTYN++INGY+R KVEEAEK FVEMK + I P VI++TTM+
Sbjct: 245 TAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVEEAEKLFVEMKGRDIVPNVISFTTML 304
Query: 181 KGYVAAGKVDEALRLLEDMKSVGIKPNDITYSTLLPGLCDSGKMSDARLILKEMVEKYIA 360
KGYVAAG++D+AL++ E+MK G+KPN +T+STLLPGLCD+ KM++AR +L EMVE+YIA
Sbjct: 305 KGYVAAGQIDDALKVFEEMKGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEMVERYIA 364
Query: 361 PTDNSIFMRLMSSQCKVGDLDAAADVLKAMIRLSIPTEAGHYGILLEHFCKAGVYDRAVK 540
P DN++FM+LMS QCK GDLDAA DVLKAMIRLSIPTEAGHYG+L+E+FCKA +YD+A K
Sbjct: 365 PKDNAVFMKLMSCQCKAGDLDAAGDVLKAMIRLSIPTEAGHYGVLIENFCKANLYDKAEK 424
Query: 541 LLDKVIEKEIVLRQQS-----VSEMKPDAYNPMIEYLCNNGKTGKAETLFRQLMKVGVQD 705
LLDK+IEKEIVLRQ++ + EM+P AYN MI YLC +G+TGKAET FRQLMK GVQD
Sbjct: 425 LLDKMIEKEIVLRQKNAYETELFEMEPSAYNLMIGYLCEHGRTGKAETFFRQLMKKGVQD 484
Query: 706 PAAFNNLIRGHSKEGNPDSASELAKIMVRRKIPTEASAYKLLIESYLRKGEPADAKSALD 885
+FNNLI GHSKEGNPDSA E+ KIM RR + +A +Y+LLIESYLRKGEPADAK+ALD
Sbjct: 485 SVSFNNLICGHSKEGNPDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTALD 544
Query: 886 GMIENGHLPDSSLYRSVIESLFEDGRVQTASRVMNTMLEKGVKEHMDLVAKILEALLLRG 1065
GM+E+GHLP+SSLYRSV+ESLF+DGRVQTASRVM +M+EKGVKE+MDLV+K+LEALL+RG
Sbjct: 545 GMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMRG 604
Query: 1066 HVEEAIGRIELLLKCGCAPDADSLLSVLCEKSKTIAALKLLDFCLERDCDIDFSSYEKVL 1245
HVEEA+GRI LL+ GC PD D LLSVLCEK KTIAALKLLDF LERDC IDFS Y+KVL
Sbjct: 605 HVEEALGRIHLLMLNGCEPDFDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVL 664
Query: 1246 DALITAGKTLNAYSILCKIMEKGGTTDWSCCEELIKSLNAQGNTKQADVLSRMI 1407
DAL+ AGKTLNAYSILCKI+EKGG+TDWS +ELIKSLN +GNTKQADVLSRMI
Sbjct: 665 DALLAAGKTLNAYSILCKILEKGGSTDWSSRDELIKSLNQEGNTKQADVLSRMI 718
>ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 684 bits (1765), Expect = 0.0
Identities = 337/469 (71%), Positives = 400/469 (85%)
Frame = +1
Query: 1 TANRFFEDMKTREILPDVVTYNSMINGYYRVNKVEEAEKYFVEMKEKKIDPTVITYTTMI 180
TA RF+EDMK+R I PDVVTYN+MINGY R +EEAE++F EMK K I PTVI+YTTMI
Sbjct: 277 TAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMI 336
Query: 181 KGYVAAGKVDEALRLLEDMKSVGIKPNDITYSTLLPGLCDSGKMSDARLILKEMVEKYIA 360
KGYV+ + D+ALRL E+MK+ G KPNDITYSTLLPGLCD+ K+ +AR IL EMV ++ A
Sbjct: 337 KGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFA 396
Query: 361 PTDNSIFMRLMSSQCKVGDLDAAADVLKAMIRLSIPTEAGHYGILLEHFCKAGVYDRAVK 540
P DNSIFMRL+S QCK GDLDAA VLKAMIRLSIPTEAGHYGIL+E+ CKAG+YD+AVK
Sbjct: 397 PKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVK 456
Query: 541 LLDKVIEKEIVLRQQSVSEMKPDAYNPMIEYLCNNGKTGKAETLFRQLMKVGVQDPAAFN 720
LL+ ++EKEI+LR QS EM+ AYN +I+YLCN+G+TGKA+T FRQL+K G+QD AFN
Sbjct: 457 LLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFN 516
Query: 721 NLIRGHSKEGNPDSASELAKIMVRRKIPTEASAYKLLIESYLRKGEPADAKSALDGMIEN 900
NLIRGH+KEGNPD A E+ KIM RR + +A +YKLLI+SYL KGEPADAK+ALD MIEN
Sbjct: 517 NLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIEN 576
Query: 901 GHLPDSSLYRSVIESLFEDGRVQTASRVMNTMLEKGVKEHMDLVAKILEALLLRGHVEEA 1080
GH PDS+L+RSV+ESLF DGRVQTASRVMN+ML+KG+ E++DLVAKILEAL +RGH EEA
Sbjct: 577 GHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEA 636
Query: 1081 IGRIELLLKCGCAPDADSLLSVLCEKSKTIAALKLLDFCLERDCDIDFSSYEKVLDALIT 1260
+GRI LL+ C C PD +SLLSVLCEK KT +A KLLDF LER+C+I+FSSYEKVLDAL+
Sbjct: 637 LGRINLLMNCNCPPDFNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLG 696
Query: 1261 AGKTLNAYSILCKIMEKGGTTDWSCCEELIKSLNAQGNTKQADVLSRMI 1407
AGKTLNAY+ILCKIMEKGG DWS C++LIKSLN +GNTKQAD+LSRMI
Sbjct: 697 AGKTLNAYAILCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQADILSRMI 745