BLASTX nr result

ID: Bupleurum21_contig00000178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000178
         (1225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32019.3| unnamed protein product [Vitis vinifera]              471   e-130
ref|XP_002276462.1| PREDICTED: uncharacterized protein LOC100258...   471   e-130
ref|XP_002520137.1| conserved hypothetical protein [Ricinus comm...   462   e-128
ref|XP_002312707.1| predicted protein [Populus trichocarpa] gi|2...   459   e-127
ref|XP_004172884.1| PREDICTED: uncharacterized LOC101218869 [Cuc...   454   e-125

>emb|CBI32019.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  471 bits (1213), Expect = e-130
 Identities = 233/293 (79%), Positives = 258/293 (88%), Gaps = 1/293 (0%)
 Frame = -3

Query: 1037 RSVLGSMEAVYLNRNPTAKAILELVHSIDGDHICYDHIAFRTFGVNGHGIDSLAKFFLDF 858
            R+VLGSME VYLNRNPTAK++LELV S+D D ICYDH+AFRTFGVNG+GIDS+A+FFLDF
Sbjct: 87   RNVLGSMETVYLNRNPTAKSVLELVRSVDNDRICYDHLAFRTFGVNGYGIDSMAQFFLDF 146

Query: 857  GYSQRDELRFPAKKLKALWFSPPSSLCPEGGNGVNGPLPRVFISELLVDQMSSQAQEIIQ 678
            GY  R+ELRFPAKKL+ALWFSPP     + G GV+GPLPR+FISELLVDQMS  AQEII+
Sbjct: 147  GYKPREELRFPAKKLRALWFSPPRISHTDTGTGVHGPLPRIFISELLVDQMSPPAQEIIR 206

Query: 677  KYTKISGRAYNHAALASAIGSLTWEKPLHSEFQLLARESEYAAWTLVNGYALNHVTISTH 498
            KYT+ISG    HAALASA G LTWEKPL+SEFQ LARESEYAAWTLVNGYA+NHVTISTH
Sbjct: 207  KYTEISGSGNKHAALASAQGFLTWEKPLYSEFQQLARESEYAAWTLVNGYAVNHVTISTH 266

Query: 497  RLKSDIRNIRSFNGFIEENGFKLNTEGGTLKVSPDGLLQQSSTVADSFSFDFSDGITTSV 318
            +LKS +RNI   N FIEENGFKLN+EGG LKVSPDGLL QSSTVADS SF FSDG+T SV
Sbjct: 267  QLKSHLRNIEMLNQFIEENGFKLNSEGGVLKVSPDGLLLQSSTVADSVSFQFSDGVTESV 326

Query: 317  PCSYIEFAERMVLPQYKNI-HEEIKEYHRRDGFEVGNADKIFESTSVDQLTRR 162
            PCSYIEFAER+VLPQYKN+  +E+KEYHRRDGFEVGNADKIFESTS DQLTRR
Sbjct: 327  PCSYIEFAERLVLPQYKNLPDKEVKEYHRRDGFEVGNADKIFESTSKDQLTRR 379


>ref|XP_002276462.1| PREDICTED: uncharacterized protein LOC100258620 [Vitis vinifera]
          Length = 418

 Score =  471 bits (1213), Expect = e-130
 Identities = 233/293 (79%), Positives = 258/293 (88%), Gaps = 1/293 (0%)
 Frame = -3

Query: 1037 RSVLGSMEAVYLNRNPTAKAILELVHSIDGDHICYDHIAFRTFGVNGHGIDSLAKFFLDF 858
            R+VLGSME VYLNRNPTAK++LELV S+D D ICYDH+AFRTFGVNG+GIDS+A+FFLDF
Sbjct: 124  RNVLGSMETVYLNRNPTAKSVLELVRSVDNDRICYDHLAFRTFGVNGYGIDSMAQFFLDF 183

Query: 857  GYSQRDELRFPAKKLKALWFSPPSSLCPEGGNGVNGPLPRVFISELLVDQMSSQAQEIIQ 678
            GY  R+ELRFPAKKL+ALWFSPP     + G GV+GPLPR+FISELLVDQMS  AQEII+
Sbjct: 184  GYKPREELRFPAKKLRALWFSPPRISHTDTGTGVHGPLPRIFISELLVDQMSPPAQEIIR 243

Query: 677  KYTKISGRAYNHAALASAIGSLTWEKPLHSEFQLLARESEYAAWTLVNGYALNHVTISTH 498
            KYT+ISG    HAALASA G LTWEKPL+SEFQ LARESEYAAWTLVNGYA+NHVTISTH
Sbjct: 244  KYTEISGSGNKHAALASAQGFLTWEKPLYSEFQQLARESEYAAWTLVNGYAVNHVTISTH 303

Query: 497  RLKSDIRNIRSFNGFIEENGFKLNTEGGTLKVSPDGLLQQSSTVADSFSFDFSDGITTSV 318
            +LKS +RNI   N FIEENGFKLN+EGG LKVSPDGLL QSSTVADS SF FSDG+T SV
Sbjct: 304  QLKSHLRNIEMLNQFIEENGFKLNSEGGVLKVSPDGLLLQSSTVADSVSFQFSDGVTESV 363

Query: 317  PCSYIEFAERMVLPQYKNI-HEEIKEYHRRDGFEVGNADKIFESTSVDQLTRR 162
            PCSYIEFAER+VLPQYKN+  +E+KEYHRRDGFEVGNADKIFESTS DQLTRR
Sbjct: 364  PCSYIEFAERLVLPQYKNLPDKEVKEYHRRDGFEVGNADKIFESTSKDQLTRR 416


>ref|XP_002520137.1| conserved hypothetical protein [Ricinus communis]
            gi|223540629|gb|EEF42192.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 307

 Score =  462 bits (1189), Expect = e-128
 Identities = 229/297 (77%), Positives = 261/297 (87%), Gaps = 5/297 (1%)
 Frame = -3

Query: 1037 RSVLGSMEAVYLNRNPTAKAILELVHSIDGDHICYDHIAFRTFGVNGHGIDSLAKFFLDF 858
            RSVL  ME+VYLNRNPTAKA+L LV SIDG+ ICYDH+AFRTFGVNGHGIDS+A  FLD+
Sbjct: 9    RSVLSGMESVYLNRNPTAKAVLRLVQSIDGERICYDHLAFRTFGVNGHGIDSMASIFLDY 68

Query: 857  GYSQRDELRFPAKKLKALWFSPP--SSLCPEGGNG--VNGPLPRVFISELLVDQMSSQAQ 690
            GY+Q++EL+FPAKKLKALWF+PP  S L   GG+G  +NGPLPR+FISELLVDQMS QAQ
Sbjct: 69   GYTQQEELKFPAKKLKALWFAPPRISYLDCGGGDGAGINGPLPRIFISELLVDQMSPQAQ 128

Query: 689  EIIQKYTKISGRAYNHAALASAIGSLTWEKPLHSEFQLLARESEYAAWTLVNGYALNHVT 510
            EII+KYT+IS   Y HAALASA+GSLTW+KPL++EFQ L+RESEYAAWTLVNGYALNHVT
Sbjct: 129  EIIKKYTEISSSGYKHAALASALGSLTWKKPLYTEFQQLSRESEYAAWTLVNGYALNHVT 188

Query: 509  ISTHRLKSDIRNIRSFNGFIEENGFKLNTEGGTLKVSPDGLLQQSSTVADSFSFDFSDGI 330
            ISTHRLKS +R I + N FIEENGFKLN EGG LKVSPDGLL QSSTVADS +F F+DG+
Sbjct: 189  ISTHRLKSHLRKINALNQFIEENGFKLNCEGGVLKVSPDGLLLQSSTVADSITFKFADGV 248

Query: 329  TTSVPCSYIEFAERMVLPQYKNI-HEEIKEYHRRDGFEVGNADKIFESTSVDQLTRR 162
              SVPCSYIEFAER+VLPQ+KN+  EE+KE+HRRDGFEVGNADKIFESTS +QLTRR
Sbjct: 249  NESVPCSYIEFAERLVLPQFKNLPEEEVKEFHRRDGFEVGNADKIFESTSKEQLTRR 305


>ref|XP_002312707.1| predicted protein [Populus trichocarpa] gi|222852527|gb|EEE90074.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  459 bits (1180), Expect = e-127
 Identities = 227/293 (77%), Positives = 255/293 (87%), Gaps = 5/293 (1%)
 Frame = -3

Query: 1019 MEAVYLNRNPTAKAILELVHSID-GDHICYDHIAFRTFGVNGHGIDSLAKFFLDFGYSQR 843
            ME VYL RNPTAKAIL+LV S+D  DHICYDH+AFRTFGV GHGI+S+A FFLD+GY Q+
Sbjct: 1    MERVYLKRNPTAKAILDLVKSVDDADHICYDHLAFRTFGVKGHGIESMASFFLDYGYKQQ 60

Query: 842  DELRFPAKKLKALWFSPPSSLCPEG---GNGVNGPLPRVFISELLVDQMSSQAQEIIQKY 672
            +ELRFPAKKLKALWFSPPS L  E    G+GVNGPLPR+FISELLVDQ+S QAQEII+KY
Sbjct: 61   EELRFPAKKLKALWFSPPSGLPHEDAATGSGVNGPLPRIFISELLVDQLSPQAQEIIEKY 120

Query: 671  TKISGRAYNHAALASAIGSLTWEKPLHSEFQLLARESEYAAWTLVNGYALNHVTISTHRL 492
             + SG  Y HA LASA+GSLTW+KP  S+FQ LA+ESEYAAWTLVNGYALNHVTISTHRL
Sbjct: 121  IETSGSGYKHATLASALGSLTWKKPFFSDFQQLAKESEYAAWTLVNGYALNHVTISTHRL 180

Query: 491  KSDIRNIRSFNGFIEENGFKLNTEGGTLKVSPDGLLQQSSTVADSFSFDFSDGITTSVPC 312
            K+ + NIR+ N F++ENGFKLN+EGG LKVSPDGLL QSSTVADS SF FSDG T SVPC
Sbjct: 181  KTHLTNIRALNQFLQENGFKLNSEGGALKVSPDGLLLQSSTVADSISFKFSDGFTESVPC 240

Query: 311  SYIEFAERMVLPQYKNIH-EEIKEYHRRDGFEVGNADKIFESTSVDQLTRRTG 156
            SYIEFAER+VLPQYKN+  EE+KE+HRRDGFEVGNADKIFESTS +QLTRRTG
Sbjct: 241  SYIEFAERLVLPQYKNLRKEEVKEFHRRDGFEVGNADKIFESTSKEQLTRRTG 293


>ref|XP_004172884.1| PREDICTED: uncharacterized LOC101218869 [Cucumis sativus]
          Length = 372

 Score =  454 bits (1167), Expect = e-125
 Identities = 225/290 (77%), Positives = 253/290 (87%), Gaps = 2/290 (0%)
 Frame = -3

Query: 1037 RSVLGSMEAVYLNRNPTAKAILELVHSIDGDHICYDHIAFRTFGVNGHGIDSLAKFFLDF 858
            R+VL SMEAVYL RNPTAK++LELV S+ GD ICYDHIAFRTFG++GHGIDSLA FFLDF
Sbjct: 78   RNVLASMEAVYLRRNPTAKSVLELVRSVHGDTICYDHIAFRTFGIDGHGIDSLASFFLDF 137

Query: 857  GYSQRDELRFPAKKLKALWFSPPS-SLCPEGGNGVNGPLPRVFISELLVDQMSSQAQEII 681
            GY+Q++EL FPAKKLKA WFSPPS S     G+GVNGPLPRVFIS+LLVDQMS Q Q+II
Sbjct: 138  GYTQKEELSFPAKKLKAFWFSPPSISNAAYDGDGVNGPLPRVFISQLLVDQMSKQTQDII 197

Query: 680  QKYTKISGRAYNHAALASAIGSLTWEKPLHSEFQLLARESEYAAWTLVNGYALNHVTIST 501
            +KYT+ S     HAALA A+GSLTWEKP HSEF+ LARESEYAAWTLVNGYALNHVTIST
Sbjct: 198  RKYTECSCNGNKHAALAGALGSLTWEKPSHSEFEQLARESEYAAWTLVNGYALNHVTIST 257

Query: 500  HRLKSDIRNIRSFNGFIEENGFKLNTEGGTLKVSPDGLLQQSSTVADSFSFDFSDGITTS 321
            HRLKS +++I+S N FIEENG+KLN+EGG LKVSPDGLL QSST+ADS SF+FSDGIT S
Sbjct: 258  HRLKSHLKDIKSLNQFIEENGYKLNSEGGVLKVSPDGLLLQSSTLADSISFEFSDGITAS 317

Query: 320  VPCSYIEFAERMVLPQYKNIHE-EIKEYHRRDGFEVGNADKIFESTSVDQ 174
            VPCSYIEFAER +LPQYK++ E E+KEYHRRDGFEVGNADKIFESTS  Q
Sbjct: 318  VPCSYIEFAERALLPQYKHLPETEVKEYHRRDGFEVGNADKIFESTSKQQ 367


Top