BLASTX nr result

ID: Bupleurum21_contig00000166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000166
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40089.1|ATP4_IPOBA RecName: Full=ATP synthase subunit delta'...   253   3e-65
ref|XP_003521047.1| PREDICTED: ATP synthase subunit delta', mito...   252   5e-65
gb|ACS83604.1| ATP synthase delta subunit 3 [Gossypium hirsutum]      251   9e-65
ref|XP_002326840.1| predicted protein [Populus trichocarpa] gi|2...   250   1e-64
emb|CAN84027.1| hypothetical protein VITISV_044183 [Vitis vinifera]   249   3e-64

>sp|Q40089.1|ATP4_IPOBA RecName: Full=ATP synthase subunit delta', mitochondrial; AltName:
           Full=F-ATPase delta' subunit; Flags: Precursor
           gi|217938|dbj|BAA01511.1| mitochondrial F1-ATPase delta
           subunit [Ipomoea batatas]
          Length = 200

 Score =  253 bits (645), Expect = 3e-65
 Identities = 136/217 (62%), Positives = 159/217 (73%)
 Frame = -3

Query: 662 MFRHVTARLLSRSTPISTRARMFSSDLEASPPTDAAFAEAWKKVAPNIDPPRTPMAFMKP 483
           MFRH ++RLL+R+T +  R R FS+DL A    D+ F EAWKK+ PN+DPP+TP A+M P
Sbjct: 1   MFRH-SSRLLARATTMGWR-RPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAP 58

Query: 482 RPATPTSIPSKLTVNFVLPYASELANKEVDMVIVPATTGQMGILPXXXXXXXXXXXXXXX 303
           RPATP+SIPSKLTVNFVLPY+SELA KEVDMVI+PATTGQMG+LP               
Sbjct: 59  RPATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLP--------------- 103

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXYFVSSGFAFIHANSYADIIAVEAVPVDQIDANQVQK 123
                                   YFVS GFAFIHANS+ADIIAVEAVP+D+IDAN VQK
Sbjct: 104 GHVATIAELKPGVMSVHEGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQK 163

Query: 122 GLAEFTQKLSSATTDLEKAEAQIGVDVHSALNSALTG 12
           GLAEFTQKL++A+TD+EKAEAQIGVDVHSALN+ALTG
Sbjct: 164 GLAEFTQKLNTASTDVEKAEAQIGVDVHSALNAALTG 200


>ref|XP_003521047.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Glycine
           max]
          Length = 197

 Score =  252 bits (643), Expect = 5e-65
 Identities = 137/217 (63%), Positives = 157/217 (72%)
 Frame = -3

Query: 662 MFRHVTARLLSRSTPISTRARMFSSDLEASPPTDAAFAEAWKKVAPNIDPPRTPMAFMKP 483
           M R  T+ LL+ ++      R  SSD+ A+P  D+AFAEAWKKV+PNIDPP+TP+A+MKP
Sbjct: 1   MLRRATSSLLTGAS-----RRRLSSDVPATPAADSAFAEAWKKVSPNIDPPKTPLAYMKP 55

Query: 482 RPATPTSIPSKLTVNFVLPYASELANKEVDMVIVPATTGQMGILPXXXXXXXXXXXXXXX 303
           RP TP+++PSKLTVNFVLPY+S+LA KEVDMVIVPATTGQMG+LP               
Sbjct: 56  RPPTPSALPSKLTVNFVLPYSSQLAAKEVDMVIVPATTGQMGVLP--------------- 100

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXYFVSSGFAFIHANSYADIIAVEAVPVDQIDANQVQK 123
                                   YFVSSGFAFIHANS ADIIAVEAVPVD+IDAN VQK
Sbjct: 101 GHVATIAELKPGVLSVHEGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDANLVQK 160

Query: 122 GLAEFTQKLSSATTDLEKAEAQIGVDVHSALNSALTG 12
           GL +FTQKL+SATTDLEKAEAQIGVDVHSALNSALTG
Sbjct: 161 GLQDFTQKLNSATTDLEKAEAQIGVDVHSALNSALTG 197


>gb|ACS83604.1| ATP synthase delta subunit 3 [Gossypium hirsutum]
          Length = 201

 Score =  251 bits (641), Expect = 9e-65
 Identities = 134/209 (64%), Positives = 150/209 (71%)
 Frame = -3

Query: 638 LLSRSTPISTRARMFSSDLEASPPTDAAFAEAWKKVAPNIDPPRTPMAFMKPRPATPTSI 459
           LL   + +  RAR FS+DL A+P  DA F EAW KV PN+DPP+TP++FM+PRP TP+SI
Sbjct: 8   LLPCRSILPARARPFSTDLPAAPSADATFTEAWTKVIPNMDPPKTPLSFMQPRPPTPSSI 67

Query: 458 PSKLTVNFVLPYASELANKEVDMVIVPATTGQMGILPXXXXXXXXXXXXXXXXXXXXXXX 279
           PSKLTVNFVLPYASELA KEVDMVIVPATTGQMG+LP                       
Sbjct: 68  PSKLTVNFVLPYASELATKEVDMVIVPATTGQMGVLP---------------GHVATIAE 112

Query: 278 XXXXXXXXXXXXXXXXYFVSSGFAFIHANSYADIIAVEAVPVDQIDANQVQKGLAEFTQK 99
                           YFVSSGF FIHANS+ADIIAVEAVP+D++D N VQKGLAEFT K
Sbjct: 113 LKPGVLSVHEGSEMTKYFVSSGFVFIHANSFADIIAVEAVPLDRLDVNLVQKGLAEFTSK 172

Query: 98  LSSATTDLEKAEAQIGVDVHSALNSALTG 12
           LSSATTDLEKAEAQIG+DVHSALNSALTG
Sbjct: 173 LSSATTDLEKAEAQIGIDVHSALNSALTG 201


>ref|XP_002326840.1| predicted protein [Populus trichocarpa] gi|222835155|gb|EEE73590.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  250 bits (639), Expect = 1e-64
 Identities = 133/217 (61%), Positives = 158/217 (72%)
 Frame = -3

Query: 662 MFRHVTARLLSRSTPISTRARMFSSDLEASPPTDAAFAEAWKKVAPNIDPPRTPMAFMKP 483
           MFR  T  +L+R+     RAR+FS+ L A+   D+ FAEAWKKVAPN+DPP+TP++FM+P
Sbjct: 1   MFRRATTGILARTI----RARLFSTGLPAAQTIDSTFAEAWKKVAPNLDPPKTPLSFMQP 56

Query: 482 RPATPTSIPSKLTVNFVLPYASELANKEVDMVIVPATTGQMGILPXXXXXXXXXXXXXXX 303
           RP TP++IPSKLTVNFVLPYASE++ KEVDMVI+PA+TGQMG+LP               
Sbjct: 57  RPPTPSAIPSKLTVNFVLPYASEISGKEVDMVIIPASTGQMGVLP--------------- 101

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXYFVSSGFAFIHANSYADIIAVEAVPVDQIDANQVQK 123
                                   YFVSSGFAFIHANS ADI+AVEA P+DQID++ VQK
Sbjct: 102 GHVSTITELKPGVLSVHEGNEVKKYFVSSGFAFIHANSIADIVAVEAAPLDQIDSSLVQK 161

Query: 122 GLAEFTQKLSSATTDLEKAEAQIGVDVHSALNSALTG 12
           GLAEFTQKLSSA+TDLEKAEAQIGVDVHSALN+ALTG
Sbjct: 162 GLAEFTQKLSSASTDLEKAEAQIGVDVHSALNAALTG 198


>emb|CAN84027.1| hypothetical protein VITISV_044183 [Vitis vinifera]
          Length = 206

 Score =  249 bits (636), Expect = 3e-64
 Identities = 136/222 (61%), Positives = 157/222 (70%), Gaps = 5/222 (2%)
 Frame = -3

Query: 662 MFRHVTARLLSR-----STPISTRARMFSSDLEASPPTDAAFAEAWKKVAPNIDPPRTPM 498
           M R  T RLL+R     S+  + RAR FS+DL A+P  D+ F +AWKK+ PNIDPP TP+
Sbjct: 1   MLRQAT-RLLARPAIASSSSFAARARPFSTDLPAAPAEDSTFIDAWKKIIPNIDPPATPL 59

Query: 497 AFMKPRPATPTSIPSKLTVNFVLPYASELANKEVDMVIVPATTGQMGILPXXXXXXXXXX 318
            FM+PRP TP+SIPSKLTVNFVLPYASEL+ KEVDMVI+PATTGQMG+LP          
Sbjct: 60  TFMQPRPQTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLP---------- 109

Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFVSSGFAFIHANSYADIIAVEAVPVDQIDA 138
                                        YF+SSGFA IHANS+ADIIA+EAVP+DQID 
Sbjct: 110 -----GHVATIAELKPGVMSVHEGNDVTKYFISSGFAVIHANSFADIIAIEAVPIDQIDP 164

Query: 137 NQVQKGLAEFTQKLSSATTDLEKAEAQIGVDVHSALNSALTG 12
           + VQKGLA+FTQKLSSA+TDLEKAEAQIGVDVHSALNSALTG
Sbjct: 165 SLVQKGLADFTQKLSSASTDLEKAEAQIGVDVHSALNSALTG 206


Top