BLASTX nr result

ID: Bupleurum21_contig00000165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000165
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40089.1|ATP4_IPOBA RecName: Full=ATP synthase subunit delta'...   112   3e-23
ref|XP_002326840.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
emb|CAN84027.1| hypothetical protein VITISV_044183 [Vitis vinifera]   110   1e-22
gb|ACS83603.1| ATP synthase delta subunit 2 [Gossypium hirsutum]      110   2e-22
ref|XP_002267995.1| PREDICTED: ATP synthase subunit delta', mito...   109   3e-22

>sp|Q40089.1|ATP4_IPOBA RecName: Full=ATP synthase subunit delta', mitochondrial; AltName:
           Full=F-ATPase delta' subunit; Flags: Precursor
           gi|217938|dbj|BAA01511.1| mitochondrial F1-ATPase delta
           subunit [Ipomoea batatas]
          Length = 200

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/83 (66%), Positives = 68/83 (81%)
 Frame = +1

Query: 79  MFRHVTARLLSRSTTISTRARMFSSDLEASPPTDAAFAEAWKKVAPNIDPPRTPLAFMKP 258
           MFRH ++RLL+R+TT+  R R FS+DL A    D+ F EAWKK+ PN+DPP+TP A+M P
Sbjct: 1   MFRH-SSRLLARATTMGWR-RPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAP 58

Query: 259 RPATPTSIPSKLTVNFVLPYASE 327
           RPATP+SIPSKLTVNFVLPY+SE
Sbjct: 59  RPATPSSIPSKLTVNFVLPYSSE 81


>ref|XP_002326840.1| predicted protein [Populus trichocarpa] gi|222835155|gb|EEE73590.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = +1

Query: 79  MFRHVTARLLSRSTTISTRARMFSSDLEASPPTDAAFAEAWKKVAPNIDPPRTPLAFMKP 258
           MFR  T  +L+R+     RAR+FS+ L A+   D+ FAEAWKKVAPN+DPP+TPL+FM+P
Sbjct: 1   MFRRATTGILARTI----RARLFSTGLPAAQTIDSTFAEAWKKVAPNLDPPKTPLSFMQP 56

Query: 259 RPATPTSIPSKLTVNFVLPYASE 327
           RP TP++IPSKLTVNFVLPYASE
Sbjct: 57  RPPTPSAIPSKLTVNFVLPYASE 79


>emb|CAN84027.1| hypothetical protein VITISV_044183 [Vitis vinifera]
          Length = 206

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 5/88 (5%)
 Frame = +1

Query: 79  MFRHVTARLLSR-----STTISTRARMFSSDLEASPPTDAAFAEAWKKVAPNIDPPRTPL 243
           M R  T RLL+R     S++ + RAR FS+DL A+P  D+ F +AWKK+ PNIDPP TPL
Sbjct: 1   MLRQAT-RLLARPAIASSSSFAARARPFSTDLPAAPAEDSTFIDAWKKIIPNIDPPATPL 59

Query: 244 AFMKPRPATPTSIPSKLTVNFVLPYASE 327
            FM+PRP TP+SIPSKLTVNFVLPYASE
Sbjct: 60  TFMQPRPQTPSSIPSKLTVNFVLPYASE 87


>gb|ACS83603.1| ATP synthase delta subunit 2 [Gossypium hirsutum]
          Length = 201

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/83 (63%), Positives = 67/83 (80%)
 Frame = +1

Query: 79  MFRHVTARLLSRSTTISTRARMFSSDLEASPPTDAAFAEAWKKVAPNIDPPRTPLAFMKP 258
           MFR  + RLL+R+TT    +R FSSD+ A+P  D++F E+W KV PN+DPP+TP +FM P
Sbjct: 1   MFRQAS-RLLARTTTPWRGSRAFSSDVPATPAQDSSFIESWSKVIPNLDPPKTPSSFMTP 59

Query: 259 RPATPTSIPSKLTVNFVLPYASE 327
           RPATP++IPSKLTVNFVLPYASE
Sbjct: 60  RPATPSAIPSKLTVNFVLPYASE 82


>ref|XP_002267995.1| PREDICTED: ATP synthase subunit delta', mitochondrial [Vitis
           vinifera] gi|297734660|emb|CBI16711.3| unnamed protein
           product [Vitis vinifera]
          Length = 206

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
 Frame = +1

Query: 79  MFRHVTARLLSR-----STTISTRARMFSSDLEASPPTDAAFAEAWKKVAPNIDPPRTPL 243
           M R  T RLL+R     S++ + RAR FS+DL  +P  D+ F +AWKK+ PNIDPP TPL
Sbjct: 1   MLRQAT-RLLARPAIASSSSFAARARSFSTDLPTAPAEDSTFIDAWKKIIPNIDPPATPL 59

Query: 244 AFMKPRPATPTSIPSKLTVNFVLPYASE 327
            FM+PRP TP+SIPSKLTVNFVLPYASE
Sbjct: 60  TFMQPRPQTPSSIPSKLTVNFVLPYASE 87


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