BLASTX nr result

ID: Bupleurum21_contig00000151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000151
         (1328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB70919.1| calreticulin [Brassica napus]                          217   5e-54
ref|XP_003555807.1| PREDICTED: calreticulin-like [Glycine max]        217   6e-54
gb|AAC24083.1| Match to calreticulin (AtCRTL) mRNA gb|U27698 and...   216   8e-54
ref|XP_002892492.1| calreticulin 2 [Arabidopsis lyrata subsp. ly...   216   8e-54
ref|XP_002892491.1| hypothetical protein ARALYDRAFT_471010 [Arab...   216   8e-54

>gb|AAB70919.1| calreticulin [Brassica napus]
          Length = 422

 Score =  217 bits (553), Expect = 5e-54
 Identities = 107/145 (73%), Positives = 112/145 (77%)
 Frame = -1

Query: 440 QKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKD 261
           QKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYND NHLIKKD
Sbjct: 104 QKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDANHLIKKD 163

Query: 260 VPCETDQLSHVYTCILSSGATYNILIDNVEKQTGSLYSDRDLLPPKKMXXXXXXXXXXXX 81
           VPCETDQL+HVYT IL   ATY IL+DNVEKQTGSLYSD DLLPPKK+            
Sbjct: 164 VPCETDQLTHVYTFILRPDATYTILVDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPEDWD 223

Query: 80  XXXXXXXXXXXXXEGYDDIPKEIQD 6
                        +GYDDIPKEI D
Sbjct: 224 EQEYIPDPEDKKPDGYDDIPKEIPD 248


>ref|XP_003555807.1| PREDICTED: calreticulin-like [Glycine max]
          Length = 422

 Score =  217 bits (552), Expect = 6e-54
 Identities = 108/145 (74%), Positives = 113/145 (77%)
 Frame = -1

Query: 440 QKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKD 261
           QKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKD
Sbjct: 108 QKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKD 167

Query: 260 VPCETDQLSHVYTCILSSGATYNILIDNVEKQTGSLYSDRDLLPPKKMXXXXXXXXXXXX 81
           VPCETDQL+HVYT IL   ATY+ILIDNVEKQTGSLYSD DLLPPK +            
Sbjct: 168 VPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKTIKDPEAKKPEDWD 227

Query: 80  XXXXXXXXXXXXXEGYDDIPKEIQD 6
                        EGYDDIPKE+ D
Sbjct: 228 DKEFIPDPEDKKPEGYDDIPKELPD 252


>gb|AAC24083.1| Match to calreticulin (AtCRTL) mRNA gb|U27698 and DNA gb|U66344.
           ESTs gb|T45719, gb|T22451, gb|H36323 and gb|AA042519
           come from this gene [Arabidopsis thaliana]
          Length = 444

 Score =  216 bits (551), Expect = 8e-54
 Identities = 107/145 (73%), Positives = 113/145 (77%)
 Frame = -1

Query: 440 QKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKD 261
           QKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN+ NHLIKKD
Sbjct: 104 QKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANHLIKKD 163

Query: 260 VPCETDQLSHVYTCILSSGATYNILIDNVEKQTGSLYSDRDLLPPKKMXXXXXXXXXXXX 81
           VPCETDQL+HVYT IL   ATY+ILIDNVEKQTGSLYSD DLLPPKK+            
Sbjct: 164 VPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPEDWD 223

Query: 80  XXXXXXXXXXXXXEGYDDIPKEIQD 6
                        +GYDDIPKEI D
Sbjct: 224 EQEYISDPEDKKPDGYDDIPKEIPD 248


>ref|XP_002892492.1| calreticulin 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297338334|gb|EFH68751.1| calreticulin 2 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 424

 Score =  216 bits (551), Expect = 8e-54
 Identities = 107/145 (73%), Positives = 113/145 (77%)
 Frame = -1

Query: 440 QKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKD 261
           QKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN+ NHLIKKD
Sbjct: 104 QKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANHLIKKD 163

Query: 260 VPCETDQLSHVYTCILSSGATYNILIDNVEKQTGSLYSDRDLLPPKKMXXXXXXXXXXXX 81
           VPCETDQL+HVYT IL   ATY+ILIDNVEKQTGSLYSD DLLPPKK+            
Sbjct: 164 VPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPEDWD 223

Query: 80  XXXXXXXXXXXXXEGYDDIPKEIQD 6
                        +GYDDIPKEI D
Sbjct: 224 DQEYIADPEDKKPDGYDDIPKEIPD 248


>ref|XP_002892491.1| hypothetical protein ARALYDRAFT_471010 [Arabidopsis lyrata subsp.
           lyrata] gi|297338333|gb|EFH68750.1| hypothetical protein
           ARALYDRAFT_471010 [Arabidopsis lyrata subsp. lyrata]
          Length = 432

 Score =  216 bits (551), Expect = 8e-54
 Identities = 107/145 (73%), Positives = 113/145 (77%)
 Frame = -1

Query: 440 QKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKD 261
           QKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN+ NHLIKKD
Sbjct: 103 QKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANHLIKKD 162

Query: 260 VPCETDQLSHVYTCILSSGATYNILIDNVEKQTGSLYSDRDLLPPKKMXXXXXXXXXXXX 81
           VPCETDQL+HVYT IL   ATY+ILIDNVEKQTGSLYSD DLLPPKK+            
Sbjct: 163 VPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPEDWD 222

Query: 80  XXXXXXXXXXXXXEGYDDIPKEIQD 6
                        +GYDDIPKEI D
Sbjct: 223 DQEYIADPEDKKPDGYDDIPKEIPD 247


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