BLASTX nr result
ID: Bupleurum21_contig00000145
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000145
(516 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_680115.1| cysteine/histidine-rich C1 domain-containing pr... 78 7e-13
emb|CAB41158.1| putative protein [Arabidopsis thaliana] 78 7e-13
dbj|BAC41953.1| unknown protein [Arabidopsis thaliana] gi|290290... 74 9e-12
ref|NP_680208.1| cysteine/histidine-rich C1 domain-containing pr... 74 9e-12
ref|NP_192127.1| DC1 domain-containing protein [Arabidopsis thal... 74 1e-11
>ref|NP_680115.1| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis
thaliana] gi|332644891|gb|AEE78412.1|
cysteine/histidine-rich C1 domain-containing protein
[Arabidopsis thaliana]
Length = 619
Score = 78.2 bits (191), Expect = 7e-13
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Frame = +2
Query: 8 YSNHQKHDLFLVSKQKQKKYSSINCKVCL-IDLRSFYYCSPTINDFQVCLKCAIDLQDTS 184
+S+H H L L + + C +C + Y+CS + +F +C+ CAI+
Sbjct: 175 HSSHTNHTLELFGSESLPDSAQKTCLLCDDVSDHLIYHCS--VCNFSICVYCAIN----- 227
Query: 185 SSKGPAETIQHW-SHQHALLCVDRYATFHCDGCNKVSTDCSYRCDKCPFWIHQSCADLPK 361
P I+H +H+H L + R F C+ C C Y C C + IH+ C DLP+
Sbjct: 228 ---PPPLAIEHLKTHEHTLTLLPRQVKFICNACGMKGDGCPYFCLGCGYLIHRKCIDLPR 284
Query: 362 LYTCDHHKHPLTIASSLPEVYCNYFQKCKICKVVLNPHQWLYYCADC 502
+ + H H +++ L Y +C +C+ +N + Y C+ C
Sbjct: 285 VININRHDHRISLTHHLGLQY----SECGVCRQSVNGYYGGYSCSLC 327
Score = 57.4 bits (137), Expect = 1e-06
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +2
Query: 200 AETIQHWSHQHALLCVDRYATFHCDGC-NKVSTDCSYRCDKCPFWIHQSCADLPKLYTCD 376
+E + H H H L R C C NKV CD C F + CA+LPK
Sbjct: 482 SEPLLHDGHSHPLYYYRRQGK-SCRSCHNKVVKPRVLCCDTCDFDLDFYCANLPKTVKHC 540
Query: 377 HHKHPLTIASSLPEVYCNYFQKCKICKVVLNPHQWLYYCADC 502
+ +HPL++ +V + C IC+ +P +W Y C DC
Sbjct: 541 YDEHPLSLCHGEDDVIKDNKYWCDICETETDPKKWFYTCYDC 582
>emb|CAB41158.1| putative protein [Arabidopsis thaliana]
Length = 669
Score = 78.2 bits (191), Expect = 7e-13
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Frame = +2
Query: 8 YSNHQKHDLFLVSKQKQKKYSSINCKVCL-IDLRSFYYCSPTINDFQVCLKCAIDLQDTS 184
+S+H H L L + + C +C + Y+CS + +F +C+ CAI+
Sbjct: 175 HSSHTNHTLELFGSESLPDSAQKTCLLCDDVSDHLIYHCS--VCNFSICVYCAIN----- 227
Query: 185 SSKGPAETIQHW-SHQHALLCVDRYATFHCDGCNKVSTDCSYRCDKCPFWIHQSCADLPK 361
P I+H +H+H L + R F C+ C C Y C C + IH+ C DLP+
Sbjct: 228 ---PPPLAIEHLKTHEHTLTLLPRQVKFICNACGMKGDGCPYFCLGCGYLIHRKCIDLPR 284
Query: 362 LYTCDHHKHPLTIASSLPEVYCNYFQKCKICKVVLNPHQWLYYCADC 502
+ + H H +++ L Y +C +C+ +N + Y C+ C
Sbjct: 285 VININRHDHRISLTHHLGLQY----SECGVCRQSVNGYYGGYSCSLC 327
Score = 57.4 bits (137), Expect = 1e-06
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +2
Query: 200 AETIQHWSHQHALLCVDRYATFHCDGC-NKVSTDCSYRCDKCPFWIHQSCADLPKLYTCD 376
+E + H H H L R C C NKV CD C F + CA+LPK
Sbjct: 482 SEPLLHDGHSHPLYYYRRQGK-SCRSCHNKVVKPRVLCCDTCDFDLDFYCANLPKTVKHC 540
Query: 377 HHKHPLTIASSLPEVYCNYFQKCKICKVVLNPHQWLYYCADC 502
+ +HPL++ +V + C IC+ +P +W Y C DC
Sbjct: 541 YDEHPLSLCHGEDDVIKDNKYWCDICETETDPKKWFYTCYDC 582
>dbj|BAC41953.1| unknown protein [Arabidopsis thaliana] gi|29029012|gb|AAO64885.1|
At5g22355 [Arabidopsis thaliana]
Length = 664
Score = 74.3 bits (181), Expect = 9e-12
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Frame = +2
Query: 8 YSNHQKHDLFLVSKQKQKKYSSINCKVC-LIDLRSFYYCSPTINDFQVCLKCAIDLQDTS 184
+ +H +H L L+ + + C +C + Y CS I +F VC C D
Sbjct: 178 HPSHPQHSLKLLEYESLTSDAEETCLLCGERPDKVLYRCS--ICNFSVCRFCTKD----- 230
Query: 185 SSKGPAETIQHWSHQHALLCVDRYATFHCDGCNKVSTDCSYRCDKCPFWIHQSCADLPKL 364
P H +H+H L+ + R +F C+ C Y C +C F +H++C DLP++
Sbjct: 231 --PPPLAIEHHKTHEHRLVLLSRLISFECNACGMQGDRSPYMCVQCGFVVHRTCIDLPRV 288
Query: 365 YTCDHHKHPLTIASSLPEVYCNYFQKCKICKVVLNPHQWLYYCADCRFFA 514
+ H H ++ L Y +C IC+ ++ + Y C C +A
Sbjct: 289 ININRHDHRISFTHHLGVGY----SRCGICRKDISQYHGAYLCPRCPNYA 334
Score = 56.6 bits (135), Expect = 2e-06
Identities = 41/148 (27%), Positives = 59/148 (39%), Gaps = 2/148 (1%)
Frame = +2
Query: 65 YSSINCKVCLIDLRSFYYCSPTINDFQVCLKCAIDLQDTSSSKGPAETIQHWSHQHALLC 244
Y C C F Y ++D+ V +D++ S S E + H H+H L
Sbjct: 458 YDVFRCYACRTKSTGFRY----VSDWWV-----LDVRCGSRS----EPVIHDGHRHPLY- 503
Query: 245 VDRYATFHCDGCNKVSTDCSYRCDKCPFWIHQSCADLPKL--YTCDHHKHPLTIASSLPE 418
+ CD C K CD C F + C DLPK ++CD+H L +
Sbjct: 504 YEHKKDHCCDACYKEIDGYLLSCDTCDFDLDLHCTDLPKTVKHSCDNHPLSLCYGENATG 563
Query: 419 VYCNYFQKCKICKVVLNPHQWLYYCADC 502
Y C IC+ +P +W Y C+ C
Sbjct: 564 KYW-----CDICEAETDPSKWFYTCSKC 586
>ref|NP_680208.1| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis
thaliana] gi|9757816|dbj|BAB08334.1| Ta11-like non-LTR
retroelement protein-like [Arabidopsis thaliana]
gi|332005633|gb|AED93016.1| cysteine/histidine-rich C1
domain-containing protein [Arabidopsis thaliana]
Length = 664
Score = 74.3 bits (181), Expect = 9e-12
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Frame = +2
Query: 8 YSNHQKHDLFLVSKQKQKKYSSINCKVC-LIDLRSFYYCSPTINDFQVCLKCAIDLQDTS 184
+ +H +H L L+ + + C +C + Y CS I +F VC C D
Sbjct: 178 HPSHPQHSLKLLEYESLTSDAEETCLLCGERPDKVLYRCS--ICNFSVCRFCTKD----- 230
Query: 185 SSKGPAETIQHWSHQHALLCVDRYATFHCDGCNKVSTDCSYRCDKCPFWIHQSCADLPKL 364
P H +H+H L+ + R +F C+ C Y C +C F +H++C DLP++
Sbjct: 231 --PPPLAIEHHKTHEHRLVLLSRLISFECNACGMQGDRSPYMCVQCGFVVHRTCIDLPRV 288
Query: 365 YTCDHHKHPLTIASSLPEVYCNYFQKCKICKVVLNPHQWLYYCADCRFFA 514
+ H H ++ L Y +C IC+ ++ + Y C C +A
Sbjct: 289 ININRHDHRISFTHHLGVGY----SRCGICRKDISQYHGAYLCPRCPNYA 334
Score = 56.6 bits (135), Expect = 2e-06
Identities = 41/148 (27%), Positives = 59/148 (39%), Gaps = 2/148 (1%)
Frame = +2
Query: 65 YSSINCKVCLIDLRSFYYCSPTINDFQVCLKCAIDLQDTSSSKGPAETIQHWSHQHALLC 244
Y C C F Y ++D+ V +D++ S S E + H H+H L
Sbjct: 458 YDVFRCYACRTKSTGFRY----VSDWWV-----LDVRCGSRS----EPVIHDGHRHPLY- 503
Query: 245 VDRYATFHCDGCNKVSTDCSYRCDKCPFWIHQSCADLPKL--YTCDHHKHPLTIASSLPE 418
+ CD C K CD C F + C DLPK ++CD+H L +
Sbjct: 504 YEHKKDHCCDACYKEIDGYLLSCDTCDFDLDLHCTDLPKTVKHSCDNHPLSLCYGENATG 563
Query: 419 VYCNYFQKCKICKVVLNPHQWLYYCADC 502
Y C IC+ +P +W Y C+ C
Sbjct: 564 KYW-----CDICEAETDPSKWFYTCSKC 586
>ref|NP_192127.1| DC1 domain-containing protein [Arabidopsis thaliana]
gi|3912931|gb|AAC78715.1| putative CHP-rich zinc finger
protein similar to T10M13.18 [Arabidopsis thaliana]
gi|7268602|emb|CAB80711.1| putative CHP-rich zinc finger
protein similar to T10M13.18 [Arabidopsis thaliana]
gi|332656734|gb|AEE82134.1| DC1 domain-containing
protein [Arabidopsis thaliana]
Length = 989
Score = 73.9 bits (180), Expect = 1e-11
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Frame = +2
Query: 8 YSNHQKHDLFLVSKQKQKKYSSINCKVCL--IDLRSFYYCSPTINDFQVCLKCAIDLQDT 181
+S H H L L + Q YS C++C ID R FY+CSP +F + L+C ++
Sbjct: 514 HSYHPWHPLKLHTGQPPH-YSDGTCRLCARNIDDRLFYHCSPC--NFTLDLRCVLN---- 566
Query: 182 SSSKGPAETIQHWSHQHALLCVDRYATFHCDGCNKVSTDCSYRCDKCPFWIHQSCADLPK 361
P + +H H L+ + R +F C+ C Y C +C F IHQ C DLP+
Sbjct: 567 ---PPPQSLLNLKAHDHQLILLPRLRSFTCNACGLSGDRSPYICIQCDFMIHQDCLDLPR 623
Query: 362 LYTCDHHKHPLTIASSL 412
L + H H ++ S L
Sbjct: 624 LINVNRHDHRVSRTSVL 640
Score = 69.7 bits (169), Expect = 2e-10
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = +2
Query: 8 YSNHQKHDLFLVSKQKQKKYSSINCKVCL--IDLRSFYYCSPTINDFQVCLKCAIDLQDT 181
+S H H L L+S Q C++C ID R FY+CSP +F + L+C ++
Sbjct: 210 HSYHSLHPLKLLSGQLPDNCDG-KCRLCARKIDDRLFYHCSPC--NFTLDLRCVLNPPQQ 266
Query: 182 SSSKGPAETIQHWSHQHALLCVDRYATFHCDGCNKVSTDCSYRCDKCPFWIHQSCADLPK 361
S + +H H L + R +F C+ C Y C +C F IHQ C DLP+
Sbjct: 267 S-------LLNLKAHDHQLTLLPRLLSFTCNACGLNGDRSPYTCVQCDFMIHQDCLDLPR 319
Query: 362 LYTCDHHKHPLTIASSLPEV 421
+ + H H ++ +S+P V
Sbjct: 320 VININQHDHRVS-RTSVPGV 338