BLASTX nr result

ID: Bupleurum21_contig00000135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000135
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299286.1| predicted protein [Populus trichocarpa] gi|2...   537   e-150
emb|CAA04451.1| putative beta-subunit of K+ channels [Solanum tu...   536   e-150
gb|ABK94399.1| unknown [Populus trichocarpa]                          536   e-150
ref|XP_002518142.1| potassium channel beta, putative [Ricinus co...   534   e-149
ref|XP_002285645.1| PREDICTED: probable voltage-gated potassium ...   534   e-149

>ref|XP_002299286.1| predicted protein [Populus trichocarpa] gi|222846544|gb|EEE84091.1|
            predicted protein [Populus trichocarpa]
          Length = 328

 Score =  537 bits (1384), Expect = e-150
 Identities = 260/303 (85%), Positives = 279/303 (92%)
 Frame = -1

Query: 1110 NQLDVKEAKTLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVISTKIFW 931
            NQLDVKEAK+LLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIV+STKIFW
Sbjct: 26   NQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFW 85

Query: 930  GGSGPNDKGLSRKHIIEGTKACLKRLEMDYVDLIYCHRPDTATPIEETVRAMNYVIDKGW 751
            GGSGPNDKGLSRKHI+EGTKA LKRL+MDYVD+IYCHRPDT TPIEETVRAMNYVIDKGW
Sbjct: 86   GGSGPNDKGLSRKHILEGTKASLKRLDMDYVDVIYCHRPDTFTPIEETVRAMNYVIDKGW 145

Query: 750  AYYWGTSEWSAQQITEAWAVAEKLGLVGPIVEQPEYNLLSRHKVEVEXXXXXXXXXXXLT 571
            A+YWGTSEWSAQQITEAW +AE+L LVGPIVEQPEYN+LSRHKVE E           LT
Sbjct: 146  AFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVESEYVPLYTTYGLGLT 205

Query: 570  TWSPLASGVLTGKYNSGNIPQDSRFALENYKNLASRTLVDDVLKKVKGLQPIAEELGVPL 391
            TWSPLASGVLTGKYN G +P DSRFALENYKNLASR+LVDDVLKKV GL+PIA+ELGVPL
Sbjct: 206  TWSPLASGVLTGKYNKGGVPSDSRFALENYKNLASRSLVDDVLKKVNGLKPIADELGVPL 265

Query: 390  SQLAIAWCAANPNVSSVITGATKLHQIEENMKAINVIPLLTPEVMNKIEAIVQTKPKRPD 211
            SQLAIAWCAANPNVSSVITGATK  QI+ENMKA++VIPLLTP VM KIEA+VQ+KPKRPD
Sbjct: 266  SQLAIAWCAANPNVSSVITGATKESQIQENMKAVDVIPLLTPPVMEKIEAVVQSKPKRPD 325

Query: 210  SYR 202
            S+R
Sbjct: 326  SFR 328


>emb|CAA04451.1| putative beta-subunit of K+ channels [Solanum tuberosum]
          Length = 330

 Score =  536 bits (1382), Expect = e-150
 Identities = 263/303 (86%), Positives = 278/303 (91%)
 Frame = -1

Query: 1110 NQLDVKEAKTLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVISTKIFW 931
            NQLDVKEAKTLLQCCRDHGVNFFDNAEVYANGRAE IMGQAIRELGWKRSDIV+STKIFW
Sbjct: 28   NQLDVKEAKTLLQCCRDHGVNFFDNAEVYANGRAERIMGQAIRELGWKRSDIVVSTKIFW 87

Query: 930  GGSGPNDKGLSRKHIIEGTKACLKRLEMDYVDLIYCHRPDTATPIEETVRAMNYVIDKGW 751
            GGSGPNDKGLSRKHIIEGTKA LKRL+MDYVDLIYCHRPDT+TPIEETVRAMNYVIDKGW
Sbjct: 88   GGSGPNDKGLSRKHIIEGTKASLKRLDMDYVDLIYCHRPDTSTPIEETVRAMNYVIDKGW 147

Query: 750  AYYWGTSEWSAQQITEAWAVAEKLGLVGPIVEQPEYNLLSRHKVEVEXXXXXXXXXXXLT 571
            A+YWGTSEWSAQQITEAW VA++L LVGPIVEQPEY LLSRHKVE E           LT
Sbjct: 148  AFYWGTSEWSAQQITEAWGVAQRLDLVGPIVEQPEYKLLSRHKVESEYLPLYSNYGIGLT 207

Query: 570  TWSPLASGVLTGKYNSGNIPQDSRFALENYKNLASRTLVDDVLKKVKGLQPIAEELGVPL 391
            TWSPLASGVLTGKY SGNIP DSRF+LENYKNLASR+LVDDVL+KV GL+PIAEELGVPL
Sbjct: 208  TWSPLASGVLTGKYTSGNIPPDSRFSLENYKNLASRSLVDDVLRKVNGLKPIAEELGVPL 267

Query: 390  SQLAIAWCAANPNVSSVITGATKLHQIEENMKAINVIPLLTPEVMNKIEAIVQTKPKRPD 211
             QLAIAWCAANPNVSSVITGATK +QI++NMKAINVIP+LTP VM KIEAIVQ+KPKR D
Sbjct: 268  PQLAIAWCAANPNVSSVITGATKEYQIQDNMKAINVIPMLTPAVMEKIEAIVQSKPKRQD 327

Query: 210  SYR 202
            SYR
Sbjct: 328  SYR 330


>gb|ABK94399.1| unknown [Populus trichocarpa]
          Length = 328

 Score =  536 bits (1381), Expect = e-150
 Identities = 259/303 (85%), Positives = 279/303 (92%)
 Frame = -1

Query: 1110 NQLDVKEAKTLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVISTKIFW 931
            NQLDVKEAK+LLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIV+STKIFW
Sbjct: 26   NQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFW 85

Query: 930  GGSGPNDKGLSRKHIIEGTKACLKRLEMDYVDLIYCHRPDTATPIEETVRAMNYVIDKGW 751
            GGSGPNDKGLSRKHI+EGTKA LKRL+MDYVD+IYCHRPDT TPIEETVRAMNYVIDKGW
Sbjct: 86   GGSGPNDKGLSRKHILEGTKASLKRLDMDYVDVIYCHRPDTFTPIEETVRAMNYVIDKGW 145

Query: 750  AYYWGTSEWSAQQITEAWAVAEKLGLVGPIVEQPEYNLLSRHKVEVEXXXXXXXXXXXLT 571
            A+YWGTSEWSAQQITEAW +AE+L LVGPIVEQPEYN+LSRHKVE E           LT
Sbjct: 146  AFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVESEYVPLYTTYGLGLT 205

Query: 570  TWSPLASGVLTGKYNSGNIPQDSRFALENYKNLASRTLVDDVLKKVKGLQPIAEELGVPL 391
            TWSPLASGVLTGKYN G +P DSRFALENYKNLASR+LVDDVLKKV GL+PIA+ELGVPL
Sbjct: 206  TWSPLASGVLTGKYNKGGVPSDSRFALENYKNLASRSLVDDVLKKVNGLKPIADELGVPL 265

Query: 390  SQLAIAWCAANPNVSSVITGATKLHQIEENMKAINVIPLLTPEVMNKIEAIVQTKPKRPD 211
            SQLAIAWCAANPNVSSVITGATK  QI+ENMKA++VIPLLTP VM KIEA+VQ+KPKRPD
Sbjct: 266  SQLAIAWCAANPNVSSVITGATKESQIQENMKAVDVIPLLTPAVMEKIEAVVQSKPKRPD 325

Query: 210  SYR 202
            ++R
Sbjct: 326  TFR 328


>ref|XP_002518142.1| potassium channel beta, putative [Ricinus communis]
            gi|223542738|gb|EEF44275.1| potassium channel beta,
            putative [Ricinus communis]
          Length = 328

 Score =  534 bits (1376), Expect = e-149
 Identities = 259/303 (85%), Positives = 280/303 (92%)
 Frame = -1

Query: 1110 NQLDVKEAKTLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVISTKIFW 931
            NQLDVKEAK+LLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIV+STKIFW
Sbjct: 26   NQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFW 85

Query: 930  GGSGPNDKGLSRKHIIEGTKACLKRLEMDYVDLIYCHRPDTATPIEETVRAMNYVIDKGW 751
            GGSGPNDKGLSRKHI+EGTKA LKRL+MDYVD+IYCHRPD++TPIEET+RAMN+VIDKGW
Sbjct: 86   GGSGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDSSTPIEETIRAMNHVIDKGW 145

Query: 750  AYYWGTSEWSAQQITEAWAVAEKLGLVGPIVEQPEYNLLSRHKVEVEXXXXXXXXXXXLT 571
            A+YWGTSEWSAQQITEAW +AE+L LVGPIVEQPEYNLLSRHKVE E           LT
Sbjct: 146  AFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNLLSRHKVESEYLPLYTNYGLGLT 205

Query: 570  TWSPLASGVLTGKYNSGNIPQDSRFALENYKNLASRTLVDDVLKKVKGLQPIAEELGVPL 391
            TWSPLASGVLTGKY+ G IP DSRFALENYKNLASR+L+DDVLKKV GL+PIA+ELGVPL
Sbjct: 206  TWSPLASGVLTGKYSRGAIPPDSRFALENYKNLASRSLIDDVLKKVNGLKPIADELGVPL 265

Query: 390  SQLAIAWCAANPNVSSVITGATKLHQIEENMKAINVIPLLTPEVMNKIEAIVQTKPKRPD 211
            SQLAIAWCAANPNVSSVITGATK  QI+ENMKAI+VIPLLTP VM KIEA+VQ+KPKRPD
Sbjct: 266  SQLAIAWCAANPNVSSVITGATKESQIQENMKAIDVIPLLTPAVMEKIEAVVQSKPKRPD 325

Query: 210  SYR 202
            SYR
Sbjct: 326  SYR 328


>ref|XP_002285645.1| PREDICTED: probable voltage-gated potassium channel subunit beta
            [Vitis vinifera]
          Length = 328

 Score =  534 bits (1376), Expect = e-149
 Identities = 260/303 (85%), Positives = 280/303 (92%)
 Frame = -1

Query: 1110 NQLDVKEAKTLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVISTKIFW 931
            NQLDVKEAK+LLQCCRD+GVNFFDNAEVYANGRAEEIMGQAIRELGWKRSD+V+STKIFW
Sbjct: 26   NQLDVKEAKSLLQCCRDNGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDVVVSTKIFW 85

Query: 930  GGSGPNDKGLSRKHIIEGTKACLKRLEMDYVDLIYCHRPDTATPIEETVRAMNYVIDKGW 751
            GGSGPNDKGLSRKHIIEGTKA LKRL+M+YVD+IYCHRPD++TPIEETVRAMNYVID GW
Sbjct: 86   GGSGPNDKGLSRKHIIEGTKASLKRLDMEYVDVIYCHRPDSSTPIEETVRAMNYVIDHGW 145

Query: 750  AYYWGTSEWSAQQITEAWAVAEKLGLVGPIVEQPEYNLLSRHKVEVEXXXXXXXXXXXLT 571
            A+YWGTSEWSAQQITEAW VAE+L LVGPIVEQPEYNLLSRHKVE E           LT
Sbjct: 146  AFYWGTSEWSAQQITEAWGVAERLDLVGPIVEQPEYNLLSRHKVECEYLPLYSNYGIGLT 205

Query: 570  TWSPLASGVLTGKYNSGNIPQDSRFALENYKNLASRTLVDDVLKKVKGLQPIAEELGVPL 391
            TWSPLASGVLTGKYN G IPQDSRFALENYKNLASR+LVDDVL+KV GL+PIA+ELGVPL
Sbjct: 206  TWSPLASGVLTGKYNKGTIPQDSRFALENYKNLASRSLVDDVLRKVNGLKPIADELGVPL 265

Query: 390  SQLAIAWCAANPNVSSVITGATKLHQIEENMKAINVIPLLTPEVMNKIEAIVQTKPKRPD 211
            SQLAIAWCAANPNVSSVITGATK  QI+ENMKAI+VIPLLTP V+ KIEA+VQ+KPKRPD
Sbjct: 266  SQLAIAWCAANPNVSSVITGATKESQIQENMKAIDVIPLLTPTVLEKIEAVVQSKPKRPD 325

Query: 210  SYR 202
            SYR
Sbjct: 326  SYR 328


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