BLASTX nr result
ID: Bupleurum21_contig00000123
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000123
(633 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272807.1| PREDICTED: uncharacterized protein LOC100245... 105 2e-40
ref|XP_002887768.1| protein binding protein [Arabidopsis lyrata ... 96 3e-37
ref|NP_974174.1| zinc ion binding protein [Arabidopsis thaliana]... 95 5e-36
dbj|BAF01778.1| hypothetical protein [Arabidopsis thaliana] gi|1... 95 5e-36
ref|XP_002884932.1| protein binding protein [Arabidopsis lyrata ... 99 2e-35
>ref|XP_002272807.1| PREDICTED: uncharacterized protein LOC100245970 [Vitis vinifera]
gi|147852711|emb|CAN83796.1| hypothetical protein
VITISV_010086 [Vitis vinifera]
Length = 303
Score = 105 bits (261), Expect(2) = 2e-40
Identities = 48/92 (52%), Positives = 77/92 (83%)
Frame = +3
Query: 72 HTKKIRMEIEERQKQQTRIYISAFVQDMMKKLREKDENIQKMMRINLGLQDRVKSLYVEN 251
+T+K+R+E++ER+K+Q+R+ ++A Q + KKL+EKDE IQ++ ++N LQ+RV++L VEN
Sbjct: 118 NTEKVRLEVQERRKRQSRMLVNAIHQGIGKKLKEKDEEIQRIGKLNWLLQERVRTLSVEN 177
Query: 252 QLWKDLAQSNEATVMSLQCNLEQVLTQVSDDR 347
Q+W++LAQ+NEAT SL+ NLEQVL V+++R
Sbjct: 178 QIWRELAQTNEATANSLRTNLEQVLAHVTEER 209
Score = 87.0 bits (214), Expect(2) = 2e-40
Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
Frame = +1
Query: 451 RRRVNGDAPDEGS----RLCRKCGERESCVLLLPCRHLCLCTVCGTTLQSTCPVCNTSMN 618
R G+ +EG R CRKCG ESCVLLLPCRHLC+CT CG+T +TCPVCN+ +N
Sbjct: 236 RGECGGERGNEGEKSEKRKCRKCGVGESCVLLLPCRHLCICTACGSTTLTTCPVCNSVIN 295
Query: 619 ATVHV 633
A++HV
Sbjct: 296 ASIHV 300
>ref|XP_002887768.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333609|gb|EFH64027.1| protein binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 346
Score = 95.5 bits (236), Expect(2) = 3e-37
Identities = 45/92 (48%), Positives = 68/92 (73%)
Frame = +3
Query: 72 HTKKIRMEIEERQKQQTRIYISAFVQDMMKKLREKDENIQKMMRINLGLQDRVKSLYVEN 251
H ++++ EIEE++K+Q R + A Q + K+LR K+E +++ +IN L++RVKSL +EN
Sbjct: 161 HMERVKYEIEEKRKRQARTIMEAIEQGLAKRLRVKEEERERLGKINHALEERVKSLSMEN 220
Query: 252 QLWKDLAQSNEATVMSLQCNLEQVLTQVSDDR 347
Q+W+DLAQ+NEAT L+ NL+QVL QV D R
Sbjct: 221 QIWRDLAQTNEATANHLRTNLDQVLAQVKDIR 252
Score = 85.5 bits (210), Expect(2) = 3e-37
Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 3/65 (4%)
Frame = +1
Query: 448 VRRRVNGDAPDEGSR---LCRKCGERESCVLLLPCRHLCLCTVCGTTLQSTCPVCNTSMN 618
VRR V +A D+ R +CR CGE ESCVLLLPCRHLCLC VCG+++ TCP+C + N
Sbjct: 279 VRRTVGTEAQDKAERRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVH-TCPICRSPKN 337
Query: 619 ATVHV 633
A+VHV
Sbjct: 338 ASVHV 342
>ref|NP_974174.1| zinc ion binding protein [Arabidopsis thaliana]
gi|332198085|gb|AEE36206.1| zinc ion binding protein
[Arabidopsis thaliana]
Length = 355
Score = 94.7 bits (234), Expect(2) = 5e-36
Identities = 43/90 (47%), Positives = 67/90 (74%)
Frame = +3
Query: 72 HTKKIRMEIEERQKQQTRIYISAFVQDMMKKLREKDENIQKMMRINLGLQDRVKSLYVEN 251
H ++++ EIEE++K+Q R + A Q ++K+LR K+E +++ ++N L++RVKSL +EN
Sbjct: 163 HMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLSIEN 222
Query: 252 QLWKDLAQSNEATVMSLQCNLEQVLTQVSD 341
Q+W+DLAQ+NEAT L+ NLE VL QV D
Sbjct: 223 QIWRDLAQTNEATANHLRTNLEHVLAQVKD 252
Score = 82.4 bits (202), Expect(2) = 5e-36
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 6/68 (8%)
Frame = +1
Query: 448 VRRRVN--GDAPDEGSR----LCRKCGERESCVLLLPCRHLCLCTVCGTTLQSTCPVCNT 609
VRRRV +A D+ R +CR CGE ESCVLLLPCRHLCLC VCG+++ TCP+C +
Sbjct: 285 VRRRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVH-TCPICTS 343
Query: 610 SMNATVHV 633
NA+VHV
Sbjct: 344 PKNASVHV 351
>dbj|BAF01778.1| hypothetical protein [Arabidopsis thaliana]
gi|110740064|dbj|BAF01934.1| hypothetical protein
[Arabidopsis thaliana]
Length = 355
Score = 94.7 bits (234), Expect(2) = 5e-36
Identities = 43/90 (47%), Positives = 67/90 (74%)
Frame = +3
Query: 72 HTKKIRMEIEERQKQQTRIYISAFVQDMMKKLREKDENIQKMMRINLGLQDRVKSLYVEN 251
H ++++ EIEE++K+Q R + A Q ++K+LR K+E +++ ++N L++RVKSL +EN
Sbjct: 163 HMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLSIEN 222
Query: 252 QLWKDLAQSNEATVMSLQCNLEQVLTQVSD 341
Q+W+DLAQ+NEAT L+ NLE VL QV D
Sbjct: 223 QIWRDLAQTNEATANHLRTNLEHVLAQVKD 252
Score = 82.4 bits (202), Expect(2) = 5e-36
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 6/68 (8%)
Frame = +1
Query: 448 VRRRVN--GDAPDEGSR----LCRKCGERESCVLLLPCRHLCLCTVCGTTLQSTCPVCNT 609
VRRRV +A D+ R +CR CGE ESCVLLLPCRHLCLC VCG+++ TCP+C +
Sbjct: 285 VRRRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVH-TCPICTS 343
Query: 610 SMNATVHV 633
NA+VHV
Sbjct: 344 PKNASVHV 351
>ref|XP_002884932.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297330772|gb|EFH61191.1| protein binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 333
Score = 99.4 bits (246), Expect(2) = 2e-35
Identities = 49/92 (53%), Positives = 69/92 (75%)
Frame = +3
Query: 72 HTKKIRMEIEERQKQQTRIYISAFVQDMMKKLREKDENIQKMMRINLGLQDRVKSLYVEN 251
H +++RMEIEE++K Q R + A Q +MK LR KDE I + ++NL L+++VKSL VEN
Sbjct: 146 HVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDEEINHIGKLNLFLEEKVKSLCVEN 205
Query: 252 QLWKDLAQSNEATVMSLQCNLEQVLTQVSDDR 347
Q+W+D+AQSNEATV +L+ NL+QVL V +R
Sbjct: 206 QIWRDVAQSNEATVNALRSNLQQVLATVERNR 237
Score = 75.5 bits (184), Expect(2) = 2e-35
Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 6/67 (8%)
Frame = +1
Query: 451 RRRVNGDAPDE------GSRLCRKCGERESCVLLLPCRHLCLCTVCGTTLQSTCPVCNTS 612
R ++ G+A D G +CR CG+ E+ VLLLPCRH+CLCTVCG++L +TCP+C +
Sbjct: 264 RWKLAGEAQDTKKMRRVGLSMCRSCGKGEASVLLLPCRHMCLCTVCGSSL-NTCPICKSP 322
Query: 613 MNATVHV 633
NA++HV
Sbjct: 323 KNASLHV 329