BLASTX nr result

ID: Bupleurum21_contig00000110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000110
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEA86303.1| Zinc finger protein CONSTANS-like protein [Solanu...   141   6e-32
gb|ABH09237.1| CONSTANS-like protein [Solanum tuberosum]              137   1e-30
gb|ADW65758.1| CONSTANS-like protein [Gossypium hirsutum]             123   2e-26
ref|XP_004138691.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   122   4e-26
ref|XP_003588808.1| CONSTANS-like protein [Medicago truncatula] ...   118   6e-25

>gb|AEA86303.1| Zinc finger protein CONSTANS-like protein [Solanum nigrum]
          Length = 105

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/102 (67%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = +1

Query: 37  DYCG-SRPFMYNFNXXXXXXXXXXXXLEVGLVPDHNAMTDVSNTITQNPNSESLPSPVSG 213
           D+CG S+PFMYNF             +EVG+VPDHN MTDVSN   +N   + LP+P+S 
Sbjct: 1   DFCGGSKPFMYNFTTQSISQSVSSSSMEVGVVPDHNTMTDVSNMFVRNSVVDGLPNPISS 60

Query: 214 LDREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRF 339
            DREARV+RYREKRKNRKFEKTIRYASRKAYAETRPRIKGRF
Sbjct: 61  SDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRF 102


>gb|ABH09237.1| CONSTANS-like protein [Solanum tuberosum]
          Length = 360

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/118 (58%), Positives = 83/118 (70%), Gaps = 8/118 (6%)
 Frame = +1

Query: 10  VDGFPAYNMDYCGSRPFMYNFNXXXXXXXXXXXXLEVGLVPDHNAMTDVSNTITQNPNS- 186
           VDGFP Y +D+ GS+P+MYNF             L+VG+VPDH+AMTDVSNT   N ++ 
Sbjct: 219 VDGFPTYEIDFTGSKPYMYNFTSQSISQSVSSSSLDVGVVPDHSAMTDVSNTFVMNSSAA 278

Query: 187 -------ESLPSPVSGLDREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRF 339
                  E++P+ VSGLD  ARVMRYR+KRKN K EKTI YAS KAYAETRP+IKGRF
Sbjct: 279 AGTGTDTEAVPNAVSGLDAGARVMRYRKKRKNIKIEKTIPYASTKAYAETRPKIKGRF 336


>gb|ADW65758.1| CONSTANS-like protein [Gossypium hirsutum]
          Length = 335

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/112 (55%), Positives = 75/112 (66%)
 Frame = +1

Query: 4   APVDGFPAYNMDYCGSRPFMYNFNXXXXXXXXXXXXLEVGLVPDHNAMTDVSNTITQNPN 183
           AP      +++D+ GS+PF Y +N            L+VG+VPD + MTD+SN   + P 
Sbjct: 200 APSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDVGVVPDGSTMTDISNPYGRGPE 259

Query: 184 SESLPSPVSGLDREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRF 339
           S      +S  DREARV+RYREKRKNRKFEKTIRYASRKAYAE RPRIKGRF
Sbjct: 260 STHQMVQLSPADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRF 311


>ref|XP_004138691.1| PREDICTED: zinc finger protein CONSTANS-LIKE 4-like [Cucumis
           sativus] gi|449521617|ref|XP_004167826.1| PREDICTED:
           zinc finger protein CONSTANS-LIKE 4-like [Cucumis
           sativus]
          Length = 337

 Score =  122 bits (305), Expect = 4e-26
 Identities = 65/104 (62%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
 Frame = +1

Query: 34  MDYCGSRPFMYNFNXXXXXXXXXXXXLEVGLVPDHNAMTDVSNTITQNPNSESLPSP--V 207
           +D+ G++ F Y  N            +EVG+VPD NAMTDVSN  T+ P++ES   P  +
Sbjct: 213 IDFTGTKSFPYGHNPQSISHSVSSSSIEVGVVPDGNAMTDVSNPYTK-PSTESSVQPLQI 271

Query: 208 SGLDREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRF 339
           S  DREARV+RYREKRKNRKFEKTIRYASRKAYAETRPRIKGRF
Sbjct: 272 SPADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRF 315


>ref|XP_003588808.1| CONSTANS-like protein [Medicago truncatula]
           gi|355477856|gb|AES59059.1| CONSTANS-like protein
           [Medicago truncatula]
          Length = 316

 Score =  118 bits (295), Expect = 6e-25
 Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 4/107 (3%)
 Frame = +1

Query: 31  NMDYCGSRPFMYNFNXXXXXXXXXXXXLEVGLVPDHNAMTDVSNTITQNPNSESLPS--- 201
           N+D+  S+PF YNFN            ++VG+VPD N MT++S    Q   +E+ P    
Sbjct: 193 NIDFSNSKPFTYNFNHTVSSPS-----MDVGVVPDGNVMTEISYCSYQTTATETAPMTVA 247

Query: 202 -PVSGLDREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRF 339
            P++ ++REARVMRYREKRKNR+FEKTIRYASRKAYAETRPRIKGRF
Sbjct: 248 VPMTAVEREARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRF 294


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