BLASTX nr result

ID: Bupleurum21_contig00000108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000108
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   267   8e-70
ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777...   263   1e-68
ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|2...   261   4e-68
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...   258   3e-67
emb|CBI36804.3| unnamed protein product [Vitis vinifera]              258   3e-67

>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score =  267 bits (682), Expect = 8e-70
 Identities = 133/148 (89%), Positives = 141/148 (95%)
 Frame = -1

Query: 444  FFSVLSRGSQYRVESMLLRLAHTQNYLAIAPGSQQVASQPAMECLPLVMEPESGFYSDPV 265
            FFSVLSRGSQYRVESMLLRLAHTQNYLAI+PG+QQVASQPAMECLPLVMEPESGFY+DPV
Sbjct: 602  FFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESGFYADPV 661

Query: 264  VVLDFQSLYPSMIISYNLCFSTCLGKVTPSKSNTLGVSSYSPDPNVLLDFKDEILLTPNG 85
            VVLDFQSLYPSMII+YNLCF TCLG V+ SK NTLGVSS+SPDP VL D KDEILLTPNG
Sbjct: 662  VVLDFQSLYPSMIIAYNLCFCTCLGNVSSSKVNTLGVSSFSPDPRVLGDLKDEILLTPNG 721

Query: 84   VMFIPSKVRKGVLPRLLEEILSTRIMVK 1
            VM++PSKVRKGVLPRLLEEILSTRIMVK
Sbjct: 722  VMYVPSKVRKGVLPRLLEEILSTRIMVK 749


>ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
          Length = 2793

 Score =  263 bits (671), Expect = 1e-68
 Identities = 129/148 (87%), Positives = 140/148 (94%)
 Frame = -1

Query: 444  FFSVLSRGSQYRVESMLLRLAHTQNYLAIAPGSQQVASQPAMECLPLVMEPESGFYSDPV 265
            FFSVLSRGSQYRVESM LRLAHTQNYLAI+PG QQVASQPAMECLPLVMEPESGFYSDPV
Sbjct: 1355 FFSVLSRGSQYRVESMFLRLAHTQNYLAISPGKQQVASQPAMECLPLVMEPESGFYSDPV 1414

Query: 264  VVLDFQSLYPSMIISYNLCFSTCLGKVTPSKSNTLGVSSYSPDPNVLLDFKDEILLTPNG 85
            VVLDFQSLYPSMII+YNLCF TCLGKV  SK+NTLGVSS+SP+ +VL D KD+ILLTPNG
Sbjct: 1415 VVLDFQSLYPSMIIAYNLCFCTCLGKVVASKANTLGVSSFSPEQHVLQDLKDQILLTPNG 1474

Query: 84   VMFIPSKVRKGVLPRLLEEILSTRIMVK 1
            VMF+PSKVR+G+LPRLLEEIL+TRIMVK
Sbjct: 1475 VMFVPSKVRRGILPRLLEEILTTRIMVK 1502


>ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|222857393|gb|EEE94940.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score =  261 bits (667), Expect = 4e-68
 Identities = 127/148 (85%), Positives = 140/148 (94%)
 Frame = -1

Query: 444 FFSVLSRGSQYRVESMLLRLAHTQNYLAIAPGSQQVASQPAMECLPLVMEPESGFYSDPV 265
           FFSVLSRGSQYRVESM LRLAHTQNYLAI+PG+QQVASQPAMECLPLVMEPESGFY+DPV
Sbjct: 165 FFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESGFYADPV 224

Query: 264 VVLDFQSLYPSMIISYNLCFSTCLGKVTPSKSNTLGVSSYSPDPNVLLDFKDEILLTPNG 85
           VVLDFQSLYPSMII+YNLCF TCLG V PSK+NTLGVSS+S DP+VL D KD+ILLTPNG
Sbjct: 225 VVLDFQSLYPSMIIAYNLCFCTCLGNVAPSKANTLGVSSFSTDPSVLRDLKDKILLTPNG 284

Query: 84  VMFIPSKVRKGVLPRLLEEILSTRIMVK 1
            M++PS++RKGVLPRLLEEILSTRIM+K
Sbjct: 285 TMYVPSEIRKGVLPRLLEEILSTRIMLK 312


>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score =  258 bits (660), Expect = 3e-67
 Identities = 126/148 (85%), Positives = 138/148 (93%)
 Frame = -1

Query: 444  FFSVLSRGSQYRVESMLLRLAHTQNYLAIAPGSQQVASQPAMECLPLVMEPESGFYSDPV 265
            FFSVLSRGSQY VESM LRLAHTQN+LAI+PG QQVA+QPAMECLPLVMEPESGFY+DPV
Sbjct: 581  FFSVLSRGSQYHVESMFLRLAHTQNFLAISPGPQQVATQPAMECLPLVMEPESGFYADPV 640

Query: 264  VVLDFQSLYPSMIISYNLCFSTCLGKVTPSKSNTLGVSSYSPDPNVLLDFKDEILLTPNG 85
            VVLDFQSLYPSMII+YNLC+STCLGKV PSK++ LGVS YSPDP+ L D KD+ILLTPNG
Sbjct: 641  VVLDFQSLYPSMIIAYNLCYSTCLGKVAPSKADVLGVSIYSPDPHALHDLKDQILLTPNG 700

Query: 84   VMFIPSKVRKGVLPRLLEEILSTRIMVK 1
            VM++PSK RKGVLPRLLEEILSTRIMVK
Sbjct: 701  VMYVPSKARKGVLPRLLEEILSTRIMVK 728


>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  258 bits (660), Expect = 3e-67
 Identities = 126/148 (85%), Positives = 138/148 (93%)
 Frame = -1

Query: 444  FFSVLSRGSQYRVESMLLRLAHTQNYLAIAPGSQQVASQPAMECLPLVMEPESGFYSDPV 265
            FFSVLSRGSQY VESM LRLAHTQN+LAI+PG QQVA+QPAMECLPLVMEPESGFY+DPV
Sbjct: 1138 FFSVLSRGSQYHVESMFLRLAHTQNFLAISPGPQQVATQPAMECLPLVMEPESGFYADPV 1197

Query: 264  VVLDFQSLYPSMIISYNLCFSTCLGKVTPSKSNTLGVSSYSPDPNVLLDFKDEILLTPNG 85
            VVLDFQSLYPSMII+YNLC+STCLGKV PSK++ LGVS YSPDP+ L D KD+ILLTPNG
Sbjct: 1198 VVLDFQSLYPSMIIAYNLCYSTCLGKVAPSKADVLGVSIYSPDPHALHDLKDQILLTPNG 1257

Query: 84   VMFIPSKVRKGVLPRLLEEILSTRIMVK 1
            VM++PSK RKGVLPRLLEEILSTRIMVK
Sbjct: 1258 VMYVPSKARKGVLPRLLEEILSTRIMVK 1285


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