BLASTX nr result

ID: Bupleurum21_contig00000104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000104
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14777.3| unnamed protein product [Vitis vinifera]               92   8e-17
ref|XP_002316699.1| predicted protein [Populus trichocarpa] gi|2...    90   3e-16
emb|CAN76854.1| hypothetical protein VITISV_006002 [Vitis vinifera]    89   7e-16
ref|XP_003593396.1| Pro-resilin [Medicago truncatula] gi|3554824...    87   2e-15
ref|XP_002518589.1| conserved hypothetical protein [Ricinus comm...    82   8e-14

>emb|CBI14777.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score = 91.7 bits (226), Expect = 8e-17
 Identities = 60/166 (36%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
 Frame = +3

Query: 105 SYCNSEPQ-YINYNHSTSYDVVP-FQSLQSYSVYEIHEPQYIEYSHYSSYDASQNMYSSY 278
           +Y  +EP  Y+   +   YD  P   +L  YS YE +EP + +Y      DA       Y
Sbjct: 8   NYYEAEPGIYLPTPYGGGYDFAPSHHALAPYSCYEFNEPSFFQYGPNPFVDA-------Y 60

Query: 279 DPKLIEYADSCDPCYVNNSEINYSMHTLSEPTVVKYDPASY-------QKQYFISYKTVT 437
           DP              N S I+YS+ T+S+  +V YDP  Y         Q+ +SY    
Sbjct: 61  DPA------------PNRSTISYSVSTVSQSELVVYDPTPYGGGYDPFHTQFTVSYNKSG 108

Query: 438 FNELNNMVYDPTPYDGIYDEYDPTPYDGGYDQTVTYGKPLPPSDQI 575
           FNE +            ++EYDPTPY GGYD   TYGKPLPPSD+I
Sbjct: 109 FNEPD------------FEEYDPTPYGGGYDIAQTYGKPLPPSDEI 142


>ref|XP_002316699.1| predicted protein [Populus trichocarpa] gi|222859764|gb|EEE97311.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 68/195 (34%), Positives = 85/195 (43%), Gaps = 8/195 (4%)
 Frame = +3

Query: 6   MAYYK-SYLEGSSGEYQDSSSYTS-YDVVPSQYLQSYCNSEPQYINYNHSTSYDVVPFQS 179
           MAYY  SY +   GEY     YT  Y + P                  +++SYD  P   
Sbjct: 1   MAYYSYSYEDDYQGEY-----YTGEYSITP------------------YNSSYDPSPDHD 37

Query: 180 LQSYSVYEIHEPQYIEY---SHYSSYDASQNMYSSYDPKLIEYADSCDPCYVNNSEINYS 350
             +YS Y  +E Q + Y   S+Y++YD      SSY                  S   YS
Sbjct: 38  SVAYSSYNYNEHQVLAYDPPSYYAAYDP----VSSY------------------SRTAYS 75

Query: 351 MHTLSEPTVVKYDPASY---QKQYFISYKTVTFNELNNMVYDPTPYDGIYDEYDPTPYDG 521
             T SEP  ++YDP  Y   Q ++ +SY    FNE              Y+EYDPTPYDG
Sbjct: 76  ASTFSEPVCIEYDPGHYYNEQTRFIVSYNVSEFNE------------PAYEEYDPTPYDG 123

Query: 522 GYDQTVTYGKPLPPS 566
           GYD   TYGKPLP S
Sbjct: 124 GYDLAATYGKPLPHS 138


>emb|CAN76854.1| hypothetical protein VITISV_006002 [Vitis vinifera]
          Length = 359

 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 58/166 (34%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
 Frame = +3

Query: 105 SYCNSEPQ-YINYNHSTSYDVVP-FQSLQSYSVYEIHEPQYIEYSHYSSYDASQNMYSSY 278
           +Y  +EP  Y+       YD  P   +L  YS YE +EP + +Y              +Y
Sbjct: 7   NYYEAEPGIYLPTPXGGGYDFAPSHHALAPYSCYEFNEPSFFQY-------GPNPFVGAY 59

Query: 279 DPKLIEYADSCDPCYVNNSEINYSMHTLSEPTVVKYDPASY-------QKQYFISYKTVT 437
           DP              N S I+YS+ T+S+  +V YDP  Y         Q+ +SY    
Sbjct: 60  DPA------------PNRSTISYSVSTVSQSELVVYDPTPYGGGYDPFHTQFTVSYNKSG 107

Query: 438 FNELNNMVYDPTPYDGIYDEYDPTPYDGGYDQTVTYGKPLPPSDQI 575
           FNE +            ++EYDPTPY GGYD   TYGKPLPPSD+I
Sbjct: 108 FNEPD------------FEEYDPTPYGGGYDIAQTYGKPLPPSDEI 141


>ref|XP_003593396.1| Pro-resilin [Medicago truncatula] gi|355482444|gb|AES63647.1|
           Pro-resilin [Medicago truncatula]
          Length = 314

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 59/161 (36%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
 Frame = +3

Query: 96  YLQSYCNSEPQYINYNHST-SYDVVPFQSLQSYSVYEIHEPQYIEYSHYSSYDASQNMYS 272
           Y  S   S+    N+N  T +YD     S  +Y+ Y+ ++P Y   S  S Y A  N Y 
Sbjct: 4   YYSSCSGSDYGENNFNSYTFNYDYAQVPSFMTYNSYDYNQPNYAYDS--SLYFAPSNNY- 60

Query: 273 SYDPKLIEYADSCDPCYVNNSEINYSMHTLSEPTVVKYDPASYQKQYFISYKTVTFNELN 452
                         P +  N  I YS  T S+P  + YDP     Q  +SY T+ FNE  
Sbjct: 61  --------------PDHSYNQTIAYSATTFSDPKYLVYDPNYGMTQLVLSYSTLEFNE-- 104

Query: 453 NMVYDPTPYDGIYDEYDPTPYDGGYDQTVTYGKPLPPSDQI 575
                       +DEYDPTPY GGYD   TYGKPL PSD+I
Sbjct: 105 ----------PAFDEYDPTPYGGGYDIDSTYGKPLAPSDKI 135


>ref|XP_002518589.1| conserved hypothetical protein [Ricinus communis]
           gi|223542434|gb|EEF43976.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 336

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 46/115 (40%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = +3

Query: 237 YSSYDASQNMYSSYDPKLIEYADSCDPCYVNNSEINYSMHTLSEPTVVKYDPASY---QK 407
           YSSY  + N Y  +    I +  + D    + S I YS+   SEP  ++Y PA +   Q 
Sbjct: 40  YSSY--TSNGYQIFSSDSIPFFSAYDHPVPSFSRIGYSVSGYSEPKYIEYKPAPHYIAQT 97

Query: 408 QYFISYKTVTFNELNNMVYDPTPYDGIYDEYDPTPYDGGYDQTVTYGKPLPPSDQ 572
           Q+ ISY    F++ N            ++E DPTPY GGYDQ++TYGKPLPPSD+
Sbjct: 98  QFIISYSVSEFDDTN------------FEECDPTPYGGGYDQSLTYGKPLPPSDE 140


Top