BLASTX nr result

ID: Bupleurum21_contig00000100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000100
         (1257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279650.2| PREDICTED: mitochondrial outer membrane prot...   454   e-125
emb|CAA63968.1| pom30 [Solanum tuberosum]                             449   e-124
gb|ABB16970.1| POM30-like protein [Solanum tuberosum]                 438   e-120
ref|XP_002306507.1| porin/voltage-dependent anion-selective chan...   438   e-120
ref|XP_002525270.1| voltage-dependent anion-selective channel, p...   431   e-118

>ref|XP_002279650.2| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like
            [Vitis vinifera] gi|147772866|emb|CAN75907.1|
            hypothetical protein VITISV_001975 [Vitis vinifera]
            gi|296087320|emb|CBI33694.3| unnamed protein product
            [Vitis vinifera]
          Length = 276

 Score =  454 bits (1167), Expect = e-125
 Identities = 224/277 (80%), Positives = 252/277 (90%)
 Frame = -3

Query: 1234 MSKGPGLFGDIGKKATDLLTRDYVSDQKFSVSTASDTGVVLTSTAVKKGGLSTGDVAALY 1055
            MSKGPGLF DIGKKA DLLTRDY+SDQKF+VST SDTGV +TSTAVKKGGLSTGDVA  Y
Sbjct: 1    MSKGPGLFADIGKKAKDLLTRDYISDQKFTVSTYSDTGVAITSTAVKKGGLSTGDVAVQY 60

Query: 1054 KYKNTLVNVKFDTESNIATTLTFTDIVPSTKTIASFKLPDYNSGKLEVQYFHHHASFTTS 875
            KYKN++++VK DT SNI TTLTFT+I+PSTKTIASFK PDYNSGKLEVQYFH HA+ TTS
Sbjct: 61   KYKNSVIDVKADTGSNINTTLTFTEIIPSTKTIASFKFPDYNSGKLEVQYFHDHATLTTS 120

Query: 874  VALNQKTPAVDLSATVGTPTFAIGAEAGYETSSGKLTKYTAGIAITKPEACASIILGDKG 695
            VALNQ +PAVDLS T+GTP+ A GAEAGY+T+SG  TKYTAGI++ KP++CASIILGDKG
Sbjct: 121  VALNQ-SPAVDLSVTIGTPSIAFGAEAGYDTTSGCFTKYTAGISVAKPDSCASIILGDKG 179

Query: 694  DTIKASYLHHLDSLKKSSAVGEISRRFSTNENTFTVGGLYAVDSLTAVKAKLNNHGKLGV 515
            DTI+ASY+HHLDSLKKS+AVGEISRRFSTN+NTFTVGG YA+D LT VKAKLNNHG LG 
Sbjct: 180  DTIRASYVHHLDSLKKSAAVGEISRRFSTNDNTFTVGGSYAIDPLTNVKAKLNNHGNLGA 239

Query: 514  LLQHEVIPKSLLTLASEFDTKALDKTPKFGLALALKP 404
            LLQHE+IPKS+LTL+ EFDTKALDKTP+FGLALALKP
Sbjct: 240  LLQHEIIPKSILTLSGEFDTKALDKTPRFGLALALKP 276


>emb|CAA63968.1| pom30 [Solanum tuberosum]
          Length = 276

 Score =  449 bits (1154), Expect = e-124
 Identities = 221/277 (79%), Positives = 249/277 (89%)
 Frame = -3

Query: 1234 MSKGPGLFGDIGKKATDLLTRDYVSDQKFSVSTASDTGVVLTSTAVKKGGLSTGDVAALY 1055
            MSKGPGLF DIGKKA DLLT+DY+SDQK S+ST SDTGV LTSTAVKKGGLSTGDV A Y
Sbjct: 1    MSKGPGLFADIGKKARDLLTKDYISDQKLSISTYSDTGVALTSTAVKKGGLSTGDVGAQY 60

Query: 1054 KYKNTLVNVKFDTESNIATTLTFTDIVPSTKTIASFKLPDYNSGKLEVQYFHHHASFTTS 875
            KYKNTL++VK DT SNI+TTLT  DI PSTKTIAS K PDY+SGKLEVQY+HHHA+F+T+
Sbjct: 61   KYKNTLIDVKVDTASNISTTLTLNDIAPSTKTIASLKFPDYSSGKLEVQYYHHHAAFSTA 120

Query: 874  VALNQKTPAVDLSATVGTPTFAIGAEAGYETSSGKLTKYTAGIAITKPEACASIILGDKG 695
            V L Q +P VDLS T+GTPTFAIGAEA YET+ GKL KYTAGI++TKP++CA+IILGDKG
Sbjct: 121  VGLKQ-SPIVDLSVTLGTPTFAIGAEASYETAEGKLAKYTAGISVTKPDSCAAIILGDKG 179

Query: 694  DTIKASYLHHLDSLKKSSAVGEISRRFSTNENTFTVGGLYAVDSLTAVKAKLNNHGKLGV 515
            DTIKASY+HHLD LKKS+AVGEI+RRFSTNENTFTVGG YAVD+LT VK KLNNHG LG 
Sbjct: 180  DTIKASYIHHLDELKKSAAVGEITRRFSTNENTFTVGGSYAVDNLTIVKLKLNNHGNLGA 239

Query: 514  LLQHEVIPKSLLTLASEFDTKALDKTPKFGLALALKP 404
            LLQHE+IPKSLLT++SEFDTKAL+KTPKFG+ALALKP
Sbjct: 240  LLQHELIPKSLLTISSEFDTKALEKTPKFGVALALKP 276


>gb|ABB16970.1| POM30-like protein [Solanum tuberosum]
          Length = 275

 Score =  438 bits (1127), Expect = e-120
 Identities = 216/272 (79%), Positives = 244/272 (89%)
 Frame = -3

Query: 1219 GLFGDIGKKATDLLTRDYVSDQKFSVSTASDTGVVLTSTAVKKGGLSTGDVAALYKYKNT 1040
            GLF DIGKKA DLLT+DY+SDQK S+ST SDTGV LTSTAVKKGGLSTGDV A YKYKNT
Sbjct: 5    GLFADIGKKARDLLTKDYISDQKLSISTYSDTGVALTSTAVKKGGLSTGDVGAQYKYKNT 64

Query: 1039 LVNVKFDTESNIATTLTFTDIVPSTKTIASFKLPDYNSGKLEVQYFHHHASFTTSVALNQ 860
            L++VK DT SNI+TTLT  DI PSTKTIAS K PDY+SGKLEVQY+HHHA+F+T+V L Q
Sbjct: 65   LIDVKVDTASNISTTLTLNDIAPSTKTIASLKFPDYSSGKLEVQYYHHHAAFSTAVGLKQ 124

Query: 859  KTPAVDLSATVGTPTFAIGAEAGYETSSGKLTKYTAGIAITKPEACASIILGDKGDTIKA 680
             +P VDLS T+GTPTFAIGAEA YET+ GKL KYTAGI++TKP++CA+IILGDKGDTIKA
Sbjct: 125  -SPIVDLSVTLGTPTFAIGAEASYETAEGKLAKYTAGISVTKPDSCAAIILGDKGDTIKA 183

Query: 679  SYLHHLDSLKKSSAVGEISRRFSTNENTFTVGGLYAVDSLTAVKAKLNNHGKLGVLLQHE 500
            SY+HHLD LKKS+AVGEI+RRFSTNENTFTVGG YAVD+LT VK KLNNHG LG LLQHE
Sbjct: 184  SYIHHLDELKKSAAVGEITRRFSTNENTFTVGGSYAVDNLTIVKLKLNNHGNLGALLQHE 243

Query: 499  VIPKSLLTLASEFDTKALDKTPKFGLALALKP 404
            +IPKSLLT++SEFDTKAL+KTPKFG+ALALKP
Sbjct: 244  LIPKSLLTISSEFDTKALEKTPKFGVALALKP 275


>ref|XP_002306507.1| porin/voltage-dependent anion-selective channel protein [Populus
            trichocarpa] gi|222855956|gb|EEE93503.1|
            porin/voltage-dependent anion-selective channel protein
            [Populus trichocarpa]
          Length = 276

 Score =  438 bits (1126), Expect = e-120
 Identities = 216/277 (77%), Positives = 248/277 (89%)
 Frame = -3

Query: 1234 MSKGPGLFGDIGKKATDLLTRDYVSDQKFSVSTASDTGVVLTSTAVKKGGLSTGDVAALY 1055
            MSKGPGLF DIGKKA DLLTRDY SDQKFSVST SD GV LTSTAVKKGGL  GDVA LY
Sbjct: 1    MSKGPGLFADIGKKAKDLLTRDYNSDQKFSVSTYSDAGVALTSTAVKKGGLLAGDVATLY 60

Query: 1054 KYKNTLVNVKFDTESNIATTLTFTDIVPSTKTIASFKLPDYNSGKLEVQYFHHHASFTTS 875
            KYKNT  +VK DTESNI+ TLTFTD++PSTKT+AS KLPD+NSGKLE QYFH HA+FTT+
Sbjct: 61   KYKNTTFDVKVDTESNISATLTFTDLLPSTKTVASIKLPDHNSGKLEFQYFHDHATFTTA 120

Query: 874  VALNQKTPAVDLSATVGTPTFAIGAEAGYETSSGKLTKYTAGIAITKPEACASIILGDKG 695
             ALNQ +PA+D++AT+GTPT A GAEAGY+T+SG  TKYTAGI++TKP++ ASIILGDKG
Sbjct: 121  AALNQ-SPAIDVTATIGTPTIAFGAEAGYDTTSGSFTKYTAGISVTKPDSYASIILGDKG 179

Query: 694  DTIKASYLHHLDSLKKSSAVGEISRRFSTNENTFTVGGLYAVDSLTAVKAKLNNHGKLGV 515
            D+I+ASY+HHLD LKKS+AVGEI+RRFS+NENTFTVGG +AVD LT VKAKLNNHGKLG 
Sbjct: 180  DSIRASYVHHLDLLKKSAAVGEITRRFSSNENTFTVGGSFAVDHLTVVKAKLNNHGKLGA 239

Query: 514  LLQHEVIPKSLLTLASEFDTKALDKTPKFGLALALKP 404
            L+QHEVIPKS+LT++SEFDTKALDK P+FGLA+ALKP
Sbjct: 240  LVQHEVIPKSVLTISSEFDTKALDKNPRFGLAIALKP 276


>ref|XP_002525270.1| voltage-dependent anion-selective channel, putative [Ricinus
            communis] gi|223535428|gb|EEF37098.1| voltage-dependent
            anion-selective channel, putative [Ricinus communis]
          Length = 276

 Score =  431 bits (1108), Expect = e-118
 Identities = 213/277 (76%), Positives = 246/277 (88%)
 Frame = -3

Query: 1234 MSKGPGLFGDIGKKATDLLTRDYVSDQKFSVSTASDTGVVLTSTAVKKGGLSTGDVAALY 1055
            MSKGPGLF DIGKKA DLL +DY SDQKF+VST SD GV LTS+A+KKGGLSTGDVAALY
Sbjct: 1    MSKGPGLFSDIGKKAKDLLIKDYSSDQKFAVSTYSDAGVALTSSALKKGGLSTGDVAALY 60

Query: 1054 KYKNTLVNVKFDTESNIATTLTFTDIVPSTKTIASFKLPDYNSGKLEVQYFHHHASFTTS 875
            KYKNTL++VK DTESNI+TTLTFT+I+PSTK IASFKLPDYNSGKLEVQYFH HA+FTT+
Sbjct: 61   KYKNTLLDVKVDTESNISTTLTFTEILPSTKAIASFKLPDYNSGKLEVQYFHDHATFTTA 120

Query: 874  VALNQKTPAVDLSATVGTPTFAIGAEAGYETSSGKLTKYTAGIAITKPEACASIILGDKG 695
            +AL+ K+P VD+SAT+GTP  A GAEA Y+T++G  TKYT+GI++TKP++CASIILG KG
Sbjct: 121  LALS-KSPGVDVSATIGTPAIAFGAEASYDTTTGNFTKYTSGISVTKPDSCASIILGHKG 179

Query: 694  DTIKASYLHHLDSLKKSSAVGEISRRFSTNENTFTVGGLYAVDSLTAVKAKLNNHGKLGV 515
            DTIKASYLH+LD  KKS+ V EISRRFSTNENT TVGG YAVD LT VKAKLNN+GKLG 
Sbjct: 180  DTIKASYLHYLDQSKKSAGVAEISRRFSTNENTITVGGSYAVDHLTVVKAKLNNYGKLGA 239

Query: 514  LLQHEVIPKSLLTLASEFDTKALDKTPKFGLALALKP 404
            LLQHE+IPKS++T++SEFDTKAL+K PKFG A ALKP
Sbjct: 240  LLQHEIIPKSMVTISSEFDTKALEKHPKFGFAFALKP 276


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