BLASTX nr result

ID: Bupleurum21_contig00000090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000090
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB72814.1| putative 40S ribosomal protein S8-like protein [S...   146   1e-33
ref|XP_002275094.1| PREDICTED: 40S ribosomal protein S8-like [Vi...   146   1e-33
emb|CBI26725.3| unnamed protein product [Vitis vinifera]              146   1e-33
ref|XP_002329256.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
emb|CBI39377.3| unnamed protein product [Vitis vinifera]              145   3e-33

>gb|ABB72814.1| putative 40S ribosomal protein S8-like protein [Solanum tuberosum]
          Length = 221

 Score =  146 bits (369), Expect = 1e-33
 Identities = 74/101 (73%), Positives = 78/101 (77%)
 Frame = -3

Query: 304 IVQVDAAPFKQWYLQHYGVEIGRKKKSATXXXXXXXXXXXXXXXXXKSNHVVRKIQSRQE 125
           IVQVDAAPFKQWYLQHYGVEIGRKKKSA                   SNHV RK++ RQ+
Sbjct: 103 IVQVDAAPFKQWYLQHYGVEIGRKKKSAAKKEGEEAAEGAAEEKK--SNHVQRKLEKRQQ 160

Query: 124 DRKIDPHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKEL 2
           DRKIDPH+EEQF  GRLLAAISSRPGQCGRADGYILEGKEL
Sbjct: 161 DRKIDPHVEEQFASGRLLAAISSRPGQCGRADGYILEGKEL 201


>ref|XP_002275094.1| PREDICTED: 40S ribosomal protein S8-like [Vitis vinifera]
          Length = 219

 Score =  146 bits (369), Expect = 1e-33
 Identities = 70/101 (69%), Positives = 80/101 (79%)
 Frame = -3

Query: 304 IVQVDAAPFKQWYLQHYGVEIGRKKKSATXXXXXXXXXXXXXXXXXKSNHVVRKIQSRQE 125
           I+QVDAAPFKQWYLQHYG++IGRKKK++                  KSNHVVRK++ RQ+
Sbjct: 102 IIQVDAAPFKQWYLQHYGLDIGRKKKASATAKKEGEEGDGPAEETKKSNHVVRKLEKRQQ 161

Query: 124 DRKIDPHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKEL 2
           + K+DPHIEEQFG GRLLAAISSRPGQCGRADGYILEGKEL
Sbjct: 162 EHKLDPHIEEQFGSGRLLAAISSRPGQCGRADGYILEGKEL 202


>emb|CBI26725.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score =  146 bits (369), Expect = 1e-33
 Identities = 70/101 (69%), Positives = 80/101 (79%)
 Frame = -3

Query: 304 IVQVDAAPFKQWYLQHYGVEIGRKKKSATXXXXXXXXXXXXXXXXXKSNHVVRKIQSRQE 125
           I+QVDAAPFKQWYLQHYG++IGRKKK++                  KSNHVVRK++ RQ+
Sbjct: 95  IIQVDAAPFKQWYLQHYGLDIGRKKKASATAKKEGEEGDGPAEETKKSNHVVRKLEKRQQ 154

Query: 124 DRKIDPHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKEL 2
           + K+DPHIEEQFG GRLLAAISSRPGQCGRADGYILEGKEL
Sbjct: 155 EHKLDPHIEEQFGSGRLLAAISSRPGQCGRADGYILEGKEL 195


>ref|XP_002329256.1| predicted protein [Populus trichocarpa] gi|222870710|gb|EEF07841.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/101 (70%), Positives = 79/101 (78%)
 Frame = -3

Query: 304 IVQVDAAPFKQWYLQHYGVEIGRKKKSATXXXXXXXXXXXXXXXXXKSNHVVRKIQSRQE 125
           IVQVDAAPFKQWYLQHYGV+IGRKKK+                   KSNHV+RK++ RQ+
Sbjct: 102 IVQVDAAPFKQWYLQHYGVDIGRKKKAVVKKETPEQEGEATTEETKKSNHVIRKLEKRQQ 161

Query: 124 DRKIDPHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKEL 2
            RK+DPHIEEQFG GRLLA+ISSRPGQCGRADGYILEGKEL
Sbjct: 162 VRKLDPHIEEQFGSGRLLASISSRPGQCGRADGYILEGKEL 202


>emb|CBI39377.3| unnamed protein product [Vitis vinifera]
          Length = 214

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/101 (69%), Positives = 79/101 (78%)
 Frame = -3

Query: 304 IVQVDAAPFKQWYLQHYGVEIGRKKKSATXXXXXXXXXXXXXXXXXKSNHVVRKIQSRQE 125
           IVQVDAAPFKQWYLQHYGV+IGRKKK+                   KSNHV+RK++ RQ+
Sbjct: 95  IVQVDAAPFKQWYLQHYGVDIGRKKKTTAKKETTEEGEGGATEETKKSNHVLRKLEKRQQ 154

Query: 124 DRKIDPHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKEL 2
           D ++DPHIEEQFG GRLLA+ISSRPGQCGRADGYILEGKEL
Sbjct: 155 DHRLDPHIEEQFGSGRLLASISSRPGQCGRADGYILEGKEL 195


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