BLASTX nr result

ID: Bupleurum21_contig00000089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000089
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39377.3| unnamed protein product [Vitis vinifera]              156   1e-36
ref|XP_002269042.2| PREDICTED: 40S ribosomal protein S8-like [Vi...   156   1e-36
ref|XP_002275094.1| PREDICTED: 40S ribosomal protein S8-like [Vi...   155   3e-36
emb|CBI26725.3| unnamed protein product [Vitis vinifera]              155   3e-36
ref|XP_002329256.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36

>emb|CBI39377.3| unnamed protein product [Vitis vinifera]
          Length = 214

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/105 (71%), Positives = 84/105 (80%)
 Frame = -3

Query: 316 IVQVDAAPFKQWYLQHYGVEIGRKKKSTTXXXXXXXXXXXXXXXXXKSNHVVRKIQSRQE 137
           IVQVDAAPFKQWYLQHYGV+IGRKKK+T                  KSNHV+RK++ RQ+
Sbjct: 95  IVQVDAAPFKQWYLQHYGVDIGRKKKTTAKKETTEEGEGGATEETKKSNHVLRKLEKRQQ 154

Query: 136 DRKIDPHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYM 2
           D ++DPHIEEQFG GRLLA+ISSRPGQCGRADGYILEGKELEFYM
Sbjct: 155 DHRLDPHIEEQFGSGRLLASISSRPGQCGRADGYILEGKELEFYM 199


>ref|XP_002269042.2| PREDICTED: 40S ribosomal protein S8-like [Vitis vinifera]
           gi|147772691|emb|CAN64937.1| hypothetical protein
           VITISV_011515 [Vitis vinifera]
          Length = 221

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/105 (71%), Positives = 84/105 (80%)
 Frame = -3

Query: 316 IVQVDAAPFKQWYLQHYGVEIGRKKKSTTXXXXXXXXXXXXXXXXXKSNHVVRKIQSRQE 137
           IVQVDAAPFKQWYLQHYGV+IGRKKK+T                  KSNHV+RK++ RQ+
Sbjct: 102 IVQVDAAPFKQWYLQHYGVDIGRKKKTTAKKETTEEGEGGATEETKKSNHVLRKLEKRQQ 161

Query: 136 DRKIDPHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYM 2
           D ++DPHIEEQFG GRLLA+ISSRPGQCGRADGYILEGKELEFYM
Sbjct: 162 DHRLDPHIEEQFGSGRLLASISSRPGQCGRADGYILEGKELEFYM 206


>ref|XP_002275094.1| PREDICTED: 40S ribosomal protein S8-like [Vitis vinifera]
          Length = 219

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/105 (70%), Positives = 84/105 (80%)
 Frame = -3

Query: 316 IVQVDAAPFKQWYLQHYGVEIGRKKKSTTXXXXXXXXXXXXXXXXXKSNHVVRKIQSRQE 137
           I+QVDAAPFKQWYLQHYG++IGRKKK++                  KSNHVVRK++ RQ+
Sbjct: 102 IIQVDAAPFKQWYLQHYGLDIGRKKKASATAKKEGEEGDGPAEETKKSNHVVRKLEKRQQ 161

Query: 136 DRKIDPHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYM 2
           + K+DPHIEEQFG GRLLAAISSRPGQCGRADGYILEGKELEFYM
Sbjct: 162 EHKLDPHIEEQFGSGRLLAAISSRPGQCGRADGYILEGKELEFYM 206


>emb|CBI26725.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/105 (70%), Positives = 84/105 (80%)
 Frame = -3

Query: 316 IVQVDAAPFKQWYLQHYGVEIGRKKKSTTXXXXXXXXXXXXXXXXXKSNHVVRKIQSRQE 137
           I+QVDAAPFKQWYLQHYG++IGRKKK++                  KSNHVVRK++ RQ+
Sbjct: 95  IIQVDAAPFKQWYLQHYGLDIGRKKKASATAKKEGEEGDGPAEETKKSNHVVRKLEKRQQ 154

Query: 136 DRKIDPHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYM 2
           + K+DPHIEEQFG GRLLAAISSRPGQCGRADGYILEGKELEFYM
Sbjct: 155 EHKLDPHIEEQFGSGRLLAAISSRPGQCGRADGYILEGKELEFYM 199


>ref|XP_002329256.1| predicted protein [Populus trichocarpa] gi|222870710|gb|EEF07841.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/105 (71%), Positives = 83/105 (79%)
 Frame = -3

Query: 316 IVQVDAAPFKQWYLQHYGVEIGRKKKSTTXXXXXXXXXXXXXXXXXKSNHVVRKIQSRQE 137
           IVQVDAAPFKQWYLQHYGV+IGRKKK+                   KSNHV+RK++ RQ+
Sbjct: 102 IVQVDAAPFKQWYLQHYGVDIGRKKKAVVKKETPEQEGEATTEETKKSNHVIRKLEKRQQ 161

Query: 136 DRKIDPHIEEQFGGGRLLAAISSRPGQCGRADGYILEGKELEFYM 2
            RK+DPHIEEQFG GRLLA+ISSRPGQCGRADGYILEGKELEFYM
Sbjct: 162 VRKLDPHIEEQFGSGRLLASISSRPGQCGRADGYILEGKELEFYM 206


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