BLASTX nr result

ID: Bupleurum21_contig00000085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000085
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA56109.1| cytochrome c1 [Solanum tuberosum]                     457   e-126
ref|XP_004133751.1| PREDICTED: cytochrome c1-1, heme protein, mi...   456   e-126
gb|AAB28813.2| cytochrome c1 precursor [Solanum tuberosum]            455   e-126
sp|P29610.1|CY12_SOLTU RecName: Full=Cytochrome c1-2, heme prote...   455   e-126
sp|P25076.1|CY11_SOLTU RecName: Full=Cytochrome c1-1, heme prote...   452   e-125

>emb|CAA56109.1| cytochrome c1 [Solanum tuberosum]
          Length = 260

 Score =  457 bits (1177), Expect = e-126
 Identities = 218/239 (91%), Positives = 227/239 (94%), Gaps = 1/239 (0%)
 Frame = -2

Query: 824 LLGFATIASADESEHGLECPSYQWPHDGILSSYDHASIRRGHQVYQQVCASCHSMSLVSY 645
           LLGFAT+ASADE+EHGLECPSY WPH GILSSYDHASIRRGHQVYQQVCASCHSMSLVSY
Sbjct: 8   LLGFATVASADEAEHGLECPSYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLVSY 67

Query: 644 RDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDKFPEPYPNEQAARFANGGA 465
           RDLVGVAYTEEE KAMAAEIEV DGPNDEGEMFTRPGKLSD+FP+PYPNE AARFANGGA
Sbjct: 68  RDLVGVAYTEEEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYPNEAAARFANGGA 127

Query: 464 YPPDLSVITKARHNGQNYVFALLTGYREPPAGVSVREGLHYNPYFPGGAIAMPKMLNDGA 285
           YPPDLS+ITKARHNGQNYVFALLTGYR+PPAGVS+REGLHYNPYFPGGAIAMPKMLNDGA
Sbjct: 128 YPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGA 187

Query: 284 VEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWILVLSLAFIQAGYYTN-RW 111
           VEYEDG PATEAQMGKDVVSFL+WAAEPEMEERKLMGFKWI VLSLA +QA YY   RW
Sbjct: 188 VEYEDGVPATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRW 246


>ref|XP_004133751.1| PREDICTED: cytochrome c1-1, heme protein, mitochondrial-like
           [Cucumis sativus] gi|449478083|ref|XP_004155217.1|
           PREDICTED: cytochrome c1-1, heme protein,
           mitochondrial-like [Cucumis sativus]
          Length = 307

 Score =  456 bits (1173), Expect = e-126
 Identities = 214/231 (92%), Positives = 225/231 (97%)
 Frame = -2

Query: 815 FATIASADESEHGLECPSYQWPHDGILSSYDHASIRRGHQVYQQVCASCHSMSLVSYRDL 636
           FAT+ASADE+EHGLECP+Y WPH GILSSYDHASIRRGHQVYQQVCASCHSMSL+SYRDL
Sbjct: 58  FATLASADEAEHGLECPNYPWPHQGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL 117

Query: 635 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDKFPEPYPNEQAARFANGGAYPP 456
           VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSD+FP+PY NEQAARFANGGAYPP
Sbjct: 118 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPP 177

Query: 455 DLSVITKARHNGQNYVFALLTGYREPPAGVSVREGLHYNPYFPGGAIAMPKMLNDGAVEY 276
           DLS+ITKARHNGQNYVFALLTGYR+PPAGVS+REGLHYNPYFPGGAIAMPKMLNDGAVEY
Sbjct: 178 DLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEY 237

Query: 275 EDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWILVLSLAFIQAGYY 123
           EDGTPATEAQMGKD+VSFLSWAAEPEMEERKLMGFKWI VLSLA +QA YY
Sbjct: 238 EDGTPATEAQMGKDIVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYY 288


>gb|AAB28813.2| cytochrome c1 precursor [Solanum tuberosum]
          Length = 320

 Score =  455 bits (1171), Expect = e-126
 Identities = 217/239 (90%), Positives = 227/239 (94%), Gaps = 1/239 (0%)
 Frame = -2

Query: 824 LLGFATIASADESEHGLECPSYQWPHDGILSSYDHASIRRGHQVYQQVCASCHSMSLVSY 645
           LL FATIA +DE+EHGLECPSY WPH+GILSSYDHASIRRGHQVYQQVCASCHSMSL+SY
Sbjct: 68  LLSFATIAYSDEAEHGLECPSYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISY 127

Query: 644 RDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDKFPEPYPNEQAARFANGGA 465
           RDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSD+FP+PY NE AARFANGGA
Sbjct: 128 RDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGA 187

Query: 464 YPPDLSVITKARHNGQNYVFALLTGYREPPAGVSVREGLHYNPYFPGGAIAMPKMLNDGA 285
           YPPDLS+ITKARHNGQNYVFALLTGYR+PPAGVS+REGLHYNPYFPGGAIAMPKMLNDGA
Sbjct: 188 YPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGA 247

Query: 284 VEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWILVLSLAFIQAGYYTN-RW 111
           VEYEDG PATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWI VLSLA +QA YY   RW
Sbjct: 248 VEYEDGIPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRW 306


>sp|P29610.1|CY12_SOLTU RecName: Full=Cytochrome c1-2, heme protein, mitochondrial;
           AltName: Full=Clone PC18I; AltName: Full=Complex III
           subunit 4-2; AltName: Full=Complex III subunit IV-2;
           AltName: Full=Cytochrome b-c1 complex subunit 4-2;
           AltName: Full=Ubiquinol-cytochrome-c reductase complex
           cytochrome c1 subunit 2; Short=Cytochrome c-1-2; Flags:
           Precursor
          Length = 260

 Score =  455 bits (1171), Expect = e-126
 Identities = 217/239 (90%), Positives = 226/239 (94%), Gaps = 1/239 (0%)
 Frame = -2

Query: 824 LLGFATIASADESEHGLECPSYQWPHDGILSSYDHASIRRGHQVYQQVCASCHSMSLVSY 645
           LLGFAT+ASADE+EHGLECPSY WPH GILSSYDHASIRRGHQVYQQVCASCHSMSLVSY
Sbjct: 8   LLGFATVASADEAEHGLECPSYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLVSY 67

Query: 644 RDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDKFPEPYPNEQAARFANGGA 465
           RDLVGVAYTEEE KAMAAEIEV DGPNDEGEMFTRPGKLSD+FP+PYPNE AARFANGGA
Sbjct: 68  RDLVGVAYTEEEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYPNEAAARFANGGA 127

Query: 464 YPPDLSVITKARHNGQNYVFALLTGYREPPAGVSVREGLHYNPYFPGGAIAMPKMLNDGA 285
           YPPDLS+ITKARHNGQNYVFALLT YR+PPAGVS+REGLHYNPYFPGGAIAMPKMLNDGA
Sbjct: 128 YPPDLSLITKARHNGQNYVFALLTAYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGA 187

Query: 284 VEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWILVLSLAFIQAGYYTN-RW 111
           VEYEDG PATEAQMGKDVVSFL+WAAEPEMEERKLMGFKWI VLSLA +QA YY   RW
Sbjct: 188 VEYEDGVPATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRW 246


>sp|P25076.1|CY11_SOLTU RecName: Full=Cytochrome c1-1, heme protein, mitochondrial;
           AltName: Full=Complex III subunit 4-1; AltName:
           Full=Complex III subunit IV-1; AltName: Full=Cytochrome
           b-c1 complex subunit 4-1; AltName:
           Full=Ubiquinol-cytochrome-c reductase complex cytochrome
           c1 subunit 1; Short=Cytochrome c-1-1; Flags: Precursor
           gi|21439|emb|CAA44055.1| cytochrome c1 [Solanum
           tuberosum]
          Length = 320

 Score =  452 bits (1162), Expect = e-125
 Identities = 215/239 (89%), Positives = 226/239 (94%), Gaps = 1/239 (0%)
 Frame = -2

Query: 824 LLGFATIASADESEHGLECPSYQWPHDGILSSYDHASIRRGHQVYQQVCASCHSMSLVSY 645
           LL FATIA +DE+EHGLECP+Y WPH+GILSSYDHASIRRGHQVYQQVCASCHSMSL+SY
Sbjct: 68  LLSFATIAYSDEAEHGLECPNYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISY 127

Query: 644 RDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDKFPEPYPNEQAARFANGGA 465
           RDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSD+FP+PY NE AARFANGGA
Sbjct: 128 RDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGA 187

Query: 464 YPPDLSVITKARHNGQNYVFALLTGYREPPAGVSVREGLHYNPYFPGGAIAMPKMLNDGA 285
           YPPDLS+ITKARHNGQNYVFALLT YR+PPAGVS+REGLHYNPYFPGGAIAMPKMLNDGA
Sbjct: 188 YPPDLSLITKARHNGQNYVFALLTAYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGA 247

Query: 284 VEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWILVLSLAFIQAGYYTN-RW 111
           VEYEDG PATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWI VLSLA +QA YY   RW
Sbjct: 248 VEYEDGIPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRW 306


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