BLASTX nr result

ID: Bupleurum21_contig00000074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000074
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC10964.1| 40S ribosomal protein s21e [Camellia sinensis]         158   5e-37
ref|XP_002318991.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
emb|CAN60816.1| hypothetical protein VITISV_033219 [Vitis vinifera]   152   2e-35
ref|XP_002283649.1| PREDICTED: 40S ribosomal protein S21 isoform...   152   3e-35
gb|ABK93926.1| unknown [Populus trichocarpa]                          152   3e-35

>gb|AEC10964.1| 40S ribosomal protein s21e [Camellia sinensis]
          Length = 82

 Score =  158 bits (399), Expect = 5e-37
 Identities = 75/81 (92%), Positives = 77/81 (95%)
 Frame = +1

Query: 4   MMNEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDERGIYTGGFTTFALCGFVRA 183
           M NEEGQNMDLYIPRKCSATNRLIT+KDHASVQINVGHLDE GIYTG FTTFALCGFVRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITAKDHASVQINVGHLDENGIYTGQFTTFALCGFVRA 60

Query: 184 QGDADGAVDRLWQKKKTELKQ 246
           QGDAD AVDRLWQKKKTEL+Q
Sbjct: 61  QGDADSAVDRLWQKKKTELRQ 81


>ref|XP_002318991.1| predicted protein [Populus trichocarpa]
           gi|224123806|ref|XP_002330213.1| predicted protein
           [Populus trichocarpa] gi|118484150|gb|ABK93958.1|
           unknown [Populus trichocarpa]
           gi|118484444|gb|ABK94098.1| unknown [Populus
           trichocarpa] gi|118484720|gb|ABK94229.1| unknown
           [Populus trichocarpa] gi|222857367|gb|EEE94914.1|
           predicted protein [Populus trichocarpa]
           gi|222871669|gb|EEF08800.1| predicted protein [Populus
           trichocarpa]
          Length = 82

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/81 (90%), Positives = 75/81 (92%)
 Frame = +1

Query: 4   MMNEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDERGIYTGGFTTFALCGFVRA 183
           M NEEGQNMDLYIPRKCSATNRLITSKDHASVQIN+GHLD  G YTG FTTFALCGFVRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHLDASGHYTGQFTTFALCGFVRA 60

Query: 184 QGDADGAVDRLWQKKKTELKQ 246
           QGDAD AVDRLWQKKKTEL+Q
Sbjct: 61  QGDADSAVDRLWQKKKTELRQ 81


>emb|CAN60816.1| hypothetical protein VITISV_033219 [Vitis vinifera]
          Length = 82

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/81 (88%), Positives = 75/81 (92%)
 Frame = +1

Query: 4   MMNEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDERGIYTGGFTTFALCGFVRA 183
           M NEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDE G YTG FTTFALCGFVRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDESGTYTGQFTTFALCGFVRA 60

Query: 184 QGDADGAVDRLWQKKKTELKQ 246
           QGDAD A+DRLWQKKK E++Q
Sbjct: 61  QGDADSALDRLWQKKKAEVRQ 81


>ref|XP_002283649.1| PREDICTED: 40S ribosomal protein S21 isoform 1 [Vitis vinifera]
           gi|296089706|emb|CBI39525.3| unnamed protein product
           [Vitis vinifera]
          Length = 82

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/81 (87%), Positives = 75/81 (92%)
 Frame = +1

Query: 4   MMNEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDERGIYTGGFTTFALCGFVRA 183
           M NEEGQNMDLYIPRKCSATNRLITSKDHASVQIN+GHLDE G YTG FTTFALCGFVRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHLDESGTYTGQFTTFALCGFVRA 60

Query: 184 QGDADGAVDRLWQKKKTELKQ 246
           QGDAD A+DRLWQKKK E++Q
Sbjct: 61  QGDADSALDRLWQKKKAEVRQ 81


>gb|ABK93926.1| unknown [Populus trichocarpa]
          Length = 82

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/81 (88%), Positives = 75/81 (92%)
 Frame = +1

Query: 4   MMNEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDERGIYTGGFTTFALCGFVRA 183
           M NEEGQNMDLYIPRKC+ATNRLITSKDHASVQIN+GHLD  G YTG FTTFALCGFVRA
Sbjct: 1   MQNEEGQNMDLYIPRKCTATNRLITSKDHASVQINIGHLDASGHYTGQFTTFALCGFVRA 60

Query: 184 QGDADGAVDRLWQKKKTELKQ 246
           QGDAD AVDRLWQKKKTEL+Q
Sbjct: 61  QGDADSAVDRLWQKKKTELRQ 81


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