BLASTX nr result

ID: Bupleurum21_contig00000071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000071
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY30431.1| hypothetical protein [Nicotiana tabacum]               372   e-100
ref|XP_003545711.1| PREDICTED: splicing factor 3A subunit 2-like...   370   e-100
ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like...   370   e-100
ref|XP_004161259.1| PREDICTED: splicing factor 3A subunit 2-like...   368   2e-99
ref|XP_004137848.1| PREDICTED: splicing factor 3A subunit 2-like...   368   2e-99

>gb|ACY30431.1| hypothetical protein [Nicotiana tabacum]
          Length = 253

 Score =  372 bits (954), Expect = e-100
 Identities = 179/211 (84%), Positives = 187/211 (88%)
 Frame = -2

Query: 1049 MDREWXXXXXXXXXXXAQNEAVDXXXXXXXXXXETIDLAKDPYFMRNHLGSYECKLCLTL 870
            MDREW           AQNEA+D          ETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 11   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 70

Query: 869  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVNLKKTVKIGRPGYRVTKQ 690
            HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKV LK+ VKIGRPGYRVTKQ
Sbjct: 71   HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVTLKRNVKIGRPGYRVTKQ 130

Query: 689  FDPETKQRSLLFQIEYPEIEDNVKPRHRFMSSYEQRVQPFDKKYQFLLFAAEPYDIIAFK 510
            FDPETKQRSLLFQIEYPEIEDN KPRHRFMSS+EQ++QPFDK+YQFLLFAAEPY+II+FK
Sbjct: 131  FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQKIQPFDKRYQFLLFAAEPYEIISFK 190

Query: 509  VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 417
            VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK
Sbjct: 191  VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 221


>ref|XP_003545711.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 349

 Score =  370 bits (950), Expect = e-100
 Identities = 179/211 (84%), Positives = 187/211 (88%)
 Frame = -2

Query: 1049 MDREWXXXXXXXXXXXAQNEAVDXXXXXXXXXXETIDLAKDPYFMRNHLGSYECKLCLTL 870
            MDREW           AQNEA+D          ETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1    MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 869  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVNLKKTVKIGRPGYRVTKQ 690
            HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKV L+KTVKIGRPGYRVTKQ
Sbjct: 61   HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVTLRKTVKIGRPGYRVTKQ 120

Query: 689  FDPETKQRSLLFQIEYPEIEDNVKPRHRFMSSYEQRVQPFDKKYQFLLFAAEPYDIIAFK 510
            +DPETKQRSLLFQIEYPEIED +KPRHRFMSSYEQRVQPFDK+YQ+LLFAAEPY+I+AFK
Sbjct: 121  YDPETKQRSLLFQIEYPEIEDLMKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFK 180

Query: 509  VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 417
            VPSTEIDKSTP FFSHWDPDSKMFTLQLYFK
Sbjct: 181  VPSTEIDKSTPNFFSHWDPDSKMFTLQLYFK 211


>ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 350

 Score =  370 bits (949), Expect = e-100
 Identities = 179/211 (84%), Positives = 186/211 (88%)
 Frame = -2

Query: 1049 MDREWXXXXXXXXXXXAQNEAVDXXXXXXXXXXETIDLAKDPYFMRNHLGSYECKLCLTL 870
            MDREW           AQNEA+D          ETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1    MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 869  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVNLKKTVKIGRPGYRVTKQ 690
            HNNEGNYLAHTQGKRHQTNLAKRAAREAKD+PAQPQPHKRKV L+KTVKIGRPGYRVTKQ
Sbjct: 61   HNNEGNYLAHTQGKRHQTNLAKRAAREAKDSPAQPQPHKRKVTLRKTVKIGRPGYRVTKQ 120

Query: 689  FDPETKQRSLLFQIEYPEIEDNVKPRHRFMSSYEQRVQPFDKKYQFLLFAAEPYDIIAFK 510
            +DPETKQRSLLFQIEYPEIED  KPRHRFMSSYEQRVQPFDK YQ+LLFAAEPY+I+AFK
Sbjct: 121  YDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEIVAFK 180

Query: 509  VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 417
            VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK
Sbjct: 181  VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 211


>ref|XP_004161259.1| PREDICTED: splicing factor 3A subunit 2-like [Cucumis sativus]
          Length = 341

 Score =  368 bits (944), Expect = 2e-99
 Identities = 179/211 (84%), Positives = 187/211 (88%)
 Frame = -2

Query: 1049 MDREWXXXXXXXXXXXAQNEAVDXXXXXXXXXXETIDLAKDPYFMRNHLGSYECKLCLTL 870
            MDREW           AQNEA+D          ETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1    MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 869  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVNLKKTVKIGRPGYRVTKQ 690
            HNNEGNYLAHTQGKRHQTNLAKRAAREAK+APAQPQPHKRKV+++KTVKIGRPGYRVTKQ
Sbjct: 61   HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 689  FDPETKQRSLLFQIEYPEIEDNVKPRHRFMSSYEQRVQPFDKKYQFLLFAAEPYDIIAFK 510
            FD ETKQRSLLFQIEYPEIED  KPRHRFMSSYEQRVQPFDK+YQ+LLFAAEPY+IIAFK
Sbjct: 121  FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 509  VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 417
            VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK
Sbjct: 181  VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 211


>ref|XP_004137848.1| PREDICTED: splicing factor 3A subunit 2-like [Cucumis sativus]
          Length = 341

 Score =  368 bits (944), Expect = 2e-99
 Identities = 179/211 (84%), Positives = 187/211 (88%)
 Frame = -2

Query: 1049 MDREWXXXXXXXXXXXAQNEAVDXXXXXXXXXXETIDLAKDPYFMRNHLGSYECKLCLTL 870
            MDREW           AQNEA+D          ETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1    MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 869  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVNLKKTVKIGRPGYRVTKQ 690
            HNNEGNYLAHTQGKRHQTNLAKRAAREAK+APAQPQPHKRKV+++KTVKIGRPGYRVTKQ
Sbjct: 61   HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 689  FDPETKQRSLLFQIEYPEIEDNVKPRHRFMSSYEQRVQPFDKKYQFLLFAAEPYDIIAFK 510
            FD ETKQRSLLFQIEYPEIED  KPRHRFMSSYEQRVQPFDK+YQ+LLFAAEPY+IIAFK
Sbjct: 121  FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 509  VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 417
            VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK
Sbjct: 181  VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 211


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