BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000066
         (1374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   384   e-137
ref|XP_002882630.1| 60S ribosomal protein L4/L1 [Arabidopsis lyr...   371   e-132
gb|AAM65510.1| 60S ribosomal protein L4-B (L1) [Arabidopsis thal...   371   e-131
ref|NP_187574.1| 60S ribosomal protein L4-1 [Arabidopsis thalian...   371   e-131
ref|XP_002870995.1| 60S ribosomal protein L4/L1 [Arabidopsis lyr...   370   e-131

>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  384 bits (987), Expect(2) = e-137
 Identities = 188/214 (87%), Positives = 202/214 (94%)
 Frame = +2

Query: 377  GIRPGKGKSRNRRYISRKGPLIVYGNDGAKLVKSFRNIPGVEIANVERLNLLKLAPGGHL 556
            GIRPGKGK RNRRYISRKGPLIVYG +GAKLVK+FRNIPGVE+ANVERLNLLKLAPGGHL
Sbjct: 192  GIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNLLKLAPGGHL 251

Query: 557  GRFVIWTKSAFDKLDSIYGSFDKPSEKKTGYILPRSKMVNADLARIINSDEIQSVVRPIK 736
            GRF+IWTKSA +K+DSIYGSFDK SEKK GY+LPR+KMVNADLARIINSDE+QSVVRPIK
Sbjct: 252  GRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNADLARIINSDEVQSVVRPIK 311

Query: 737  KEVKRAPMKKNPLKNLNTMLRLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRMPLTKEEA 916
            KEVKRAPMKKNPLKNLNTML+LNPYAKTARRM+LLAEAQRVKAKKEKLDKKR  + KEEA
Sbjct: 312  KEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKKRAQIPKEEA 371

Query: 917  TKIKAAGKGWYKTMISDSDYTEFDNFTKWFGVSQ 1018
              IKAAGK WY+TMISDSDYTEFDNF+KW GVSQ
Sbjct: 372  AAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405



 Score =  132 bits (333), Expect(2) = e-137
 Identities = 61/85 (71%), Positives = 68/85 (80%)
 Frame = +3

Query: 3   GGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRININQKRFXXXXXXXXXXXXXXXMAR 182
           GGGTHRAGQGAFGNMCRGGRMFAPT+IWR+WH +IN+NQKR+               MAR
Sbjct: 85  GGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAVPSLVMAR 144

Query: 183 GHKIESVPELPLVISDAAESVEKTS 257
           GH+IESVPELPLVI D+AESVEKTS
Sbjct: 145 GHRIESVPELPLVIGDSAESVEKTS 169


>ref|XP_002882630.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata]
            gi|297328470|gb|EFH58889.1| 60S ribosomal protein L4/L1
            [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score =  371 bits (953), Expect(2) = e-132
 Identities = 180/214 (84%), Positives = 199/214 (92%)
 Frame = +2

Query: 377  GIRPGKGKSRNRRYISRKGPLIVYGNDGAKLVKSFRNIPGVEIANVERLNLLKLAPGGHL 556
            GIRPGKGK RNRRYISRKGPL+VYG +GAK+VK+FRN+PGVE+ +VERLNLLKLAPGGHL
Sbjct: 193  GIRPGKGKMRNRRYISRKGPLVVYGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHL 252

Query: 557  GRFVIWTKSAFDKLDSIYGSFDKPSEKKTGYILPRSKMVNADLARIINSDEIQSVVRPIK 736
            GRFVIWTKSAF+KL+SIYGSF+KPSEKK GY+LPR+KMVNADLARIINSDEIQSVV+PIK
Sbjct: 253  GRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEIQSVVKPIK 312

Query: 737  KEVKRAPMKKNPLKNLNTMLRLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRMPLTKEEA 916
            K+ KRA +KKNPLKNLN ML+LNPYAKTA+RMSLLAEAQRVKAKKEKL KKR  +TKEEA
Sbjct: 313  KDSKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLSKKRKTVTKEEA 372

Query: 917  TKIKAAGKGWYKTMISDSDYTEFDNFTKWFGVSQ 1018
              IKAAGK WY+TMISDSDYTEFDNFTKW G SQ
Sbjct: 373  LAIKAAGKSWYQTMISDSDYTEFDNFTKWLGASQ 406



 Score =  127 bits (318), Expect(2) = e-132
 Identities = 57/85 (67%), Positives = 66/85 (77%)
 Frame = +3

Query: 3   GGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRININQKRFXXXXXXXXXXXXXXXMAR 182
           GGGTHRAGQ AFGNMCRGGRMFAPT+IWR+WH R+N+N KR                MAR
Sbjct: 86  GGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPSLVMAR 145

Query: 183 GHKIESVPELPLVISDAAESVEKTS 257
           GHKIE+VPE+PLV+SD+AE+VEKTS
Sbjct: 146 GHKIENVPEMPLVVSDSAEAVEKTS 170


>gb|AAM65510.1| 60S ribosomal protein L4-B (L1) [Arabidopsis thaliana]
          Length = 406

 Score =  371 bits (952), Expect(2) = e-131
 Identities = 180/214 (84%), Positives = 198/214 (92%)
 Frame = +2

Query: 377  GIRPGKGKSRNRRYISRKGPLIVYGNDGAKLVKSFRNIPGVEIANVERLNLLKLAPGGHL 556
            GIRPGKGK RNRRYISRKGPL+VYG +G+K+VK+FRN+PGVE+ +VERLNLLKLAPGGHL
Sbjct: 193  GIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHL 252

Query: 557  GRFVIWTKSAFDKLDSIYGSFDKPSEKKTGYILPRSKMVNADLARIINSDEIQSVVRPIK 736
            GRFVIWTKSAF+KL+SIYGSF+KPSEKK GY+LPR+KMVNADLARIINSDEIQSVV PIK
Sbjct: 253  GRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEIQSVVNPIK 312

Query: 737  KEVKRAPMKKNPLKNLNTMLRLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRMPLTKEEA 916
            K+ KRA +KKNPLKNLN ML+LNPYAKTA+RMSLLAEAQRVKAKKEKL KKR  +TKEEA
Sbjct: 313  KDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAKKRKTVTKEEA 372

Query: 917  TKIKAAGKGWYKTMISDSDYTEFDNFTKWFGVSQ 1018
              IKAAGK WYKTMISDSDYTEFDNFTKW G SQ
Sbjct: 373  LAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406



 Score =  127 bits (318), Expect(2) = e-131
 Identities = 57/85 (67%), Positives = 66/85 (77%)
 Frame = +3

Query: 3   GGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRININQKRFXXXXXXXXXXXXXXXMAR 182
           GGGTHRAGQ AFGNMCRGGRMFAPT+IWR+WH R+N+N KR                MAR
Sbjct: 86  GGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPALVMAR 145

Query: 183 GHKIESVPELPLVISDAAESVEKTS 257
           GHKIE+VPE+PLV+SD+AE+VEKTS
Sbjct: 146 GHKIENVPEMPLVVSDSAEAVEKTS 170


>ref|NP_187574.1| 60S ribosomal protein L4-1 [Arabidopsis thaliana]
            gi|17369604|sp|Q9SF40.1|RL4A_ARATH RecName: Full=60S
            ribosomal protein L4-1; Short=L1
            gi|6682241|gb|AAF23293.1|AC016661_18 putative 60S
            ribosomal protein L1 [Arabidopsis thaliana]
            gi|15982715|gb|AAL09727.1| AT3g09630/F11F8_22
            [Arabidopsis thaliana] gi|27311665|gb|AAO00798.1|
            putative 60S ribosomal protein L1 [Arabidopsis thaliana]
            gi|30725664|gb|AAP37854.1| At3g09630 [Arabidopsis
            thaliana] gi|332641268|gb|AEE74789.1| 60S ribosomal
            protein L4-1 [Arabidopsis thaliana]
          Length = 406

 Score =  371 bits (952), Expect(2) = e-131
 Identities = 180/214 (84%), Positives = 198/214 (92%)
 Frame = +2

Query: 377  GIRPGKGKSRNRRYISRKGPLIVYGNDGAKLVKSFRNIPGVEIANVERLNLLKLAPGGHL 556
            GIRPGKGK RNRRYISRKGPL+VYG +G+K+VK+FRN+PGVE+ +VERLNLLKLAPGGHL
Sbjct: 193  GIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHL 252

Query: 557  GRFVIWTKSAFDKLDSIYGSFDKPSEKKTGYILPRSKMVNADLARIINSDEIQSVVRPIK 736
            GRFVIWTKSAF+KL+SIYGSF+KPSEKK GY+LPR+KMVNADLARIINSDEIQSVV PIK
Sbjct: 253  GRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEIQSVVNPIK 312

Query: 737  KEVKRAPMKKNPLKNLNTMLRLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRMPLTKEEA 916
            K+ KRA +KKNPLKNLN ML+LNPYAKTA+RMSLLAEAQRVKAKKEKL KKR  +TKEEA
Sbjct: 313  KDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAKKRKTVTKEEA 372

Query: 917  TKIKAAGKGWYKTMISDSDYTEFDNFTKWFGVSQ 1018
              IKAAGK WYKTMISDSDYTEFDNFTKW G SQ
Sbjct: 373  LAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406



 Score =  127 bits (318), Expect(2) = e-131
 Identities = 57/85 (67%), Positives = 66/85 (77%)
 Frame = +3

Query: 3   GGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRININQKRFXXXXXXXXXXXXXXXMAR 182
           GGGTHRAGQ AFGNMCRGGRMFAPT+IWR+WH R+N+N KR                MAR
Sbjct: 86  GGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPALVMAR 145

Query: 183 GHKIESVPELPLVISDAAESVEKTS 257
           GHKIE+VPE+PLV+SD+AE+VEKTS
Sbjct: 146 GHKIENVPEMPLVVSDSAEAVEKTS 170


>ref|XP_002870995.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata]
            gi|297316832|gb|EFH47254.1| 60S ribosomal protein L4/L1
            [Arabidopsis lyrata subsp. lyrata]
          Length = 407

 Score =  370 bits (950), Expect(2) = e-131
 Identities = 178/214 (83%), Positives = 198/214 (92%)
 Frame = +2

Query: 377  GIRPGKGKSRNRRYISRKGPLIVYGNDGAKLVKSFRNIPGVEIANVERLNLLKLAPGGHL 556
            GIRPGKGK RNRRYISRKGPL+VYG +GAK+VK+FRN+PGVE+ +VERLNLLKLAPGGHL
Sbjct: 194  GIRPGKGKMRNRRYISRKGPLVVYGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHL 253

Query: 557  GRFVIWTKSAFDKLDSIYGSFDKPSEKKTGYILPRSKMVNADLARIINSDEIQSVVRPIK 736
            GRFVIWTKSAFDKL+SIYGSF+KPSEKK GY+LPRSKM+NADLARIINSDE+QSVV PIK
Sbjct: 254  GRFVIWTKSAFDKLESIYGSFEKPSEKKKGYVLPRSKMLNADLARIINSDEVQSVVNPIK 313

Query: 737  KEVKRAPMKKNPLKNLNTMLRLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRMPLTKEEA 916
            K+ KRA +KKNPLKN N ML+LNPYAKTA+RMSLLAEAQRVKAKKEKL+KKR  +TK+EA
Sbjct: 314  KDAKRAVLKKNPLKNFNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLEKKRKVVTKDEA 373

Query: 917  TKIKAAGKGWYKTMISDSDYTEFDNFTKWFGVSQ 1018
              IKAAGK WY+TMISDSDYTEFDNFTKW G SQ
Sbjct: 374  QAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407



 Score =  127 bits (318), Expect(2) = e-131
 Identities = 57/85 (67%), Positives = 66/85 (77%)
 Frame = +3

Query: 3   GGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRININQKRFXXXXXXXXXXXXXXXMAR 182
           GGGTHRAGQ AFGNMCRGGRMFAPT+IWR+WH R+N+N KR                MAR
Sbjct: 87  GGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPALVMAR 146

Query: 183 GHKIESVPELPLVISDAAESVEKTS 257
           GHKIE+VPE+PLV+SD+AE+VEKTS
Sbjct: 147 GHKIENVPEMPLVVSDSAEAVEKTS 171