BLASTX nr result
ID: Bupleurum21_contig00000065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000065
(1681 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004158797.1| PREDICTED: probable serine incorporator-like... 457 e-126
ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyr... 457 e-126
ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|2... 457 e-126
ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|1... 456 e-126
ref|NP_173069.1| serinc-domain containing protein [Arabidopsis t... 454 e-125
>ref|XP_004158797.1| PREDICTED: probable serine incorporator-like [Cucumis sativus]
Length = 411
Score = 457 bits (1177), Expect = e-126
Identities = 220/318 (69%), Positives = 250/318 (78%)
Frame = -1
Query: 1153 SLLMVGVKSQKDPRDSLHHDGWMMKVICWCLLVILMFFLPNEFISLYETMSKFGAGXXXX 974
S++MVGVKSQ+DPRD++HH GWM+KVICW LLV+LMFF+PNE I+ YE++SKFG+G
Sbjct: 95 SVMMVGVKSQRDPRDNIHHGGWMVKVICWFLLVVLMFFVPNEIITFYESISKFGSGLFLL 154
Query: 973 XXXXXXXXXVHSWNDKWVGYDEQFWYAALLVVSLVCYVATFTFAGLLFYLFTPSGQDCGL 794
VH WND WVGYDEQFWY AL VVSL CYVATF +GLLF+ FTP+G DCGL
Sbjct: 155 VQVVLLLDFVHRWNDTWVGYDEQFWYIALFVVSLFCYVATFVSSGLLFHWFTPAGHDCGL 214
Query: 793 NTFFIVMTLIFAFLFAIVTLHPTVSGSILPASVISLYCTYLCYSGLASEPREYACNGLHK 614
NTFFIVMTLIFAF+F +V LHP V GS+LPASVISLYC YLCYSGLASEPR+Y CNGLHK
Sbjct: 215 NTFFIVMTLIFAFIFTVVALHPAVGGSVLPASVISLYCMYLCYSGLASEPRDYECNGLHK 274
Query: 613 HSKSXXXXXXXXXXXXXXXXXXXXXVRAGXXXXXXXXXXXPRAGGKPLLPLDKVDEHEEK 434
HSK+ VRAG PRA GKPLLPL+K DEHEEK
Sbjct: 275 HSKAVSTGTLSLGLLTTVLSVVYSAVRAGSSTTLLSPPSSPRA-GKPLLPLEKADEHEEK 333
Query: 433 ENAKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGGSGKLVDVGWASVWVRILTGWATA 254
E +KPVTYSYSFFHIIFSLASMYSAMLLTGW+TSVGGSG+LVDVGWASVWVR++TGWATA
Sbjct: 334 EKSKPVTYSYSFFHIIFSLASMYSAMLLTGWTTSVGGSGRLVDVGWASVWVRVVTGWATA 393
Query: 253 ALFIWSMVAPHLFPEREF 200
ALFIWS++AP LFP+R+F
Sbjct: 394 ALFIWSLIAPVLFPDRDF 411
>ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335994|gb|EFH66411.1| TMS membrane family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 412
Score = 457 bits (1176), Expect = e-126
Identities = 224/319 (70%), Positives = 248/319 (77%), Gaps = 1/319 (0%)
Frame = -1
Query: 1153 SLLMVGVKSQKDPRDSLHHDGWMMKVICWCLLVILMFFLPNEFISLYETMSKFGAGXXXX 974
S++M+GVK+QKDPRD +HH GWMMK+ICWC+LVILMFFLPNE IS YE+MSKFGAG
Sbjct: 95 SVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVILMFFLPNEIISFYESMSKFGAGFFLL 154
Query: 973 XXXXXXXXXVHSWNDKWVGYDEQFWYAALLVVSLVCYVATFTFAGLLFYLFTPSGQDCGL 794
VH WND WVGYDEQFWYAALLVVSLVCY+ATF F+GLLF+ FTPSG DCGL
Sbjct: 155 VQVVLLLDFVHGWNDTWVGYDEQFWYAALLVVSLVCYLATFVFSGLLFHWFTPSGHDCGL 214
Query: 793 NTFFIVMTLIFAFLFAIVTLHPTVSGSILPASVISLYCTYLCYSGLASEPREYACNGLHK 614
NTFFI+MTLIF F+FA+V LHP V GSILPASVISLYC YLCYSGLASEPR+Y CNGLHK
Sbjct: 215 NTFFIIMTLIFVFVFAVVVLHPAVGGSILPASVISLYCMYLCYSGLASEPRDYECNGLHK 274
Query: 613 HSKSXXXXXXXXXXXXXXXXXXXXXVRAGXXXXXXXXXXXPRAGGKPLLPLD-KVDEHEE 437
HSK+ VRAG PRA KPLLP+D K +E EE
Sbjct: 275 HSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSPRA-EKPLLPIDGKAEEKEE 333
Query: 436 KENAKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGGSGKLVDVGWASVWVRILTGWAT 257
KEN KPV+YSY+FFHIIFSLASMYSAMLLTGWSTSVG SGKLVDVGW SVWVR++T WAT
Sbjct: 334 KENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRVVTSWAT 393
Query: 256 AALFIWSMVAPHLFPEREF 200
A LFIWS+VAP LFP+REF
Sbjct: 394 AGLFIWSLVAPILFPDREF 412
>ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|222842271|gb|EEE79818.1|
predicted protein [Populus trichocarpa]
Length = 415
Score = 457 bits (1176), Expect = e-126
Identities = 228/319 (71%), Positives = 248/319 (77%), Gaps = 3/319 (0%)
Frame = -1
Query: 1147 LMVGVKSQKDPRDSLHHDGWMMKVICWCLLVILMFFLPNEFISLYETMSKFGAGXXXXXX 968
+MVGVK+QKDPRDSLHH GWM KV+CWC+LVILMFFLPNE +S YE++SKFG+G
Sbjct: 97 MMVGVKNQKDPRDSLHHGGWMAKVVCWCILVILMFFLPNEIVSFYESISKFGSGLFLLVQ 156
Query: 967 XXXXXXXVHSWNDKWVGYDEQFWYAALLVVSLVCYVATFTFAGLLFYLFTPSGQDCGLNT 788
VH WNDKWVGYDE+FWY AL VVSLVCYV TF F+GLLF+ FTPSGQDCGLNT
Sbjct: 157 VVLLLDFVHGWNDKWVGYDEKFWYVALFVVSLVCYVGTFAFSGLLFHWFTPSGQDCGLNT 216
Query: 787 FFIVMTLIFAFLFAIVTLHPTVSGSILPASVISLYCTYLCYSGLASEPREYACNGLHKHS 608
FFIVMTLIFAF+FAIV LHP V+GS+LPASVISLYC YLCYSGLASEPREY CNGLH+HS
Sbjct: 217 FFIVMTLIFAFVFAIVALHPAVNGSVLPASVISLYCMYLCYSGLASEPREYECNGLHRHS 276
Query: 607 KSXXXXXXXXXXXXXXXXXXXXXVRAGXXXXXXXXXXXPRAGG-KPLLPLD-KVDEHEEK 434
K+ VRAG PRAG KPLLPLD K +E EEK
Sbjct: 277 KAVSTGTLSIGLLTTVLSVVYSAVRAGSSTALLSPPSSPRAGADKPLLPLDNKANEQEEK 336
Query: 433 ENA-KPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGGSGKLVDVGWASVWVRILTGWAT 257
E A KPVTYSYSFFHIIFSLASMYSAMLLTGWSTS+G SGKLVDVGW SVWVRILTGWAT
Sbjct: 337 EKACKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSIGESGKLVDVGWPSVWVRILTGWAT 396
Query: 256 AALFIWSMVAPHLFPEREF 200
A L+ WS+VAP LFPEREF
Sbjct: 397 AGLYTWSLVAPILFPEREF 415
>ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|118488403|gb|ABK96018.1|
unknown [Populus trichocarpa] gi|222844951|gb|EEE82498.1|
predicted protein [Populus trichocarpa]
Length = 414
Score = 456 bits (1173), Expect = e-126
Identities = 226/320 (70%), Positives = 246/320 (76%), Gaps = 2/320 (0%)
Frame = -1
Query: 1153 SLLMVGVKSQKDPRDSLHHDGWMMKVICWCLLVILMFFLPNEFISLYETMSKFGAGXXXX 974
+++MVGVK+QKDPRDSLHH GWM KV+CWCLLVI MFFLPNE +S YE++SKFG+G
Sbjct: 95 AIMMVGVKNQKDPRDSLHHGGWMAKVVCWCLLVIFMFFLPNEIVSFYESISKFGSGLFLL 154
Query: 973 XXXXXXXXXVHSWNDKWVGYDEQFWYAALLVVSLVCYVATFTFAGLLFYLFTPSGQDCGL 794
VH WNDKWVGYDEQFWYAAL VS VCYV TF F+GLLF+ FT SGQDCGL
Sbjct: 155 VQVVLLLDFVHGWNDKWVGYDEQFWYAALFAVSFVCYVGTFAFSGLLFHWFTASGQDCGL 214
Query: 793 NTFFIVMTLIFAFLFAIVTLHPTVSGSILPASVISLYCTYLCYSGLASEPREYACNGLHK 614
NTFFIVMTLIFAF+FAI LHP V+GS+LPASVISLYC YLCYSGL+SEPREY CNGLH+
Sbjct: 215 NTFFIVMTLIFAFVFAIAALHPAVNGSVLPASVISLYCMYLCYSGLSSEPREYECNGLHR 274
Query: 613 HSKSXXXXXXXXXXXXXXXXXXXXXVRAGXXXXXXXXXXXPRAGG-KPLLPLD-KVDEHE 440
HSK+ VRAG PRAG KPLLPLD K E E
Sbjct: 275 HSKAVSTSTLTIGLLTTVLSVVYSAVRAGSSTTLLSPPSSPRAGADKPLLPLDNKPSEKE 334
Query: 439 EKENAKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGGSGKLVDVGWASVWVRILTGWA 260
EKE AKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVG SGKLVDVGW SVWVRILTGWA
Sbjct: 335 EKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWA 394
Query: 259 TAALFIWSMVAPHLFPEREF 200
TA L+IWS+VAP LFP+REF
Sbjct: 395 TAGLYIWSLVAPILFPDREF 414
>ref|NP_173069.1| serinc-domain containing protein [Arabidopsis thaliana]
gi|334182610|ref|NP_001185008.1| serinc-domain containing
protein [Arabidopsis thaliana]
gi|6587821|gb|AAF18512.1|AC010924_25 Contains similarity
to gb|AF181686 membrane protein TMS1d from Drosophila
melanogaster. ESTs gb|R64994, gb|AI994832, gb|Z47674 come
from this gene [Arabidopsis thaliana]
gi|332191295|gb|AEE29416.1| serinc-domain containing
protein [Arabidopsis thaliana]
gi|332191296|gb|AEE29417.1| serinc-domain containing
protein [Arabidopsis thaliana]
Length = 412
Score = 454 bits (1169), Expect = e-125
Identities = 223/319 (69%), Positives = 246/319 (77%), Gaps = 1/319 (0%)
Frame = -1
Query: 1153 SLLMVGVKSQKDPRDSLHHDGWMMKVICWCLLVILMFFLPNEFISLYETMSKFGAGXXXX 974
S++M+GVK+QKDPRD +HH GWMMK+ICWC+LVI MFFLPNE IS YE+MSKFGAG
Sbjct: 95 SVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIISFYESMSKFGAGFFLL 154
Query: 973 XXXXXXXXXVHSWNDKWVGYDEQFWYAALLVVSLVCYVATFTFAGLLFYLFTPSGQDCGL 794
VH WND WVGYDEQFWYAALLVVSLVCY+ATF F+G LF+ FTPSG DCGL
Sbjct: 155 VQVVLLLDFVHGWNDTWVGYDEQFWYAALLVVSLVCYLATFVFSGFLFHWFTPSGHDCGL 214
Query: 793 NTFFIVMTLIFAFLFAIVTLHPTVSGSILPASVISLYCTYLCYSGLASEPREYACNGLHK 614
NTFFI+MTLIF F+FAIV LHPTV GSILPASVISLYC YLCYSGLASEPR+Y CNGLH
Sbjct: 215 NTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMYLCYSGLASEPRDYECNGLHN 274
Query: 613 HSKSXXXXXXXXXXXXXXXXXXXXXVRAGXXXXXXXXXXXPRAGGKPLLPLD-KVDEHEE 437
HSK+ VRAG PRA KPLLP+D K +E EE
Sbjct: 275 HSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSPRA-EKPLLPIDGKAEEKEE 333
Query: 436 KENAKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGGSGKLVDVGWASVWVRILTGWAT 257
KEN KPV+YSY+FFHIIFSLASMYSAMLLTGWSTSVG SGKLVDVGW SVWVR++T WAT
Sbjct: 334 KENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRVVTSWAT 393
Query: 256 AALFIWSMVAPHLFPEREF 200
A LFIWS+VAP LFP+REF
Sbjct: 394 AGLFIWSLVAPILFPDREF 412