BLASTX nr result

ID: Bupleurum21_contig00000055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000055
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542452.1| PREDICTED: zinc finger HIT domain-containing...   119   3e-25
ref|XP_002263221.1| PREDICTED: zinc finger HIT domain-containing...   118   4e-25
ref|NP_001238734.1| uncharacterized protein LOC100527614 [Glycin...   114   6e-24
ref|XP_004146755.1| PREDICTED: zinc finger HIT domain-containing...   104   7e-21
gb|AFK35496.1| unknown [Medicago truncatula]                          103   1e-20

>ref|XP_003542452.1| PREDICTED: zinc finger HIT domain-containing protein 3-like
           [Glycine max]
          Length = 132

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/109 (58%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
 Frame = -3

Query: 350 YCSLACFKKHKEVPCVKALAVPAEEKFTPNPQ--VERPCFVDEQNLVLQPSQLESIASSS 177
           YCSL CFKKHKE PCVK    P+E K T   +  VE+P   DE + VLQ  QLE+IASSS
Sbjct: 25  YCSLVCFKKHKESPCVK--PQPSETKATAVSESFVEKPLVADESSEVLQKFQLEAIASSS 82

Query: 176 ELLDALKNEELQKLICNVDNSADVDSEFDKAMEVDVFRHFTDKILSTIN 30
           E+ DAL +E LQ+LIC +D S++ ++E DKAM  + FR FTDKILSTIN
Sbjct: 83  EIRDALNDEALQELICRIDGSSNAENELDKAMAEEAFRLFTDKILSTIN 131


>ref|XP_002263221.1| PREDICTED: zinc finger HIT domain-containing protein 3 [Vitis
           vinifera] gi|297744281|emb|CBI37251.3| unnamed protein
           product [Vitis vinifera]
          Length = 132

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/107 (56%), Positives = 76/107 (71%)
 Frame = -3

Query: 350 YCSLACFKKHKEVPCVKALAVPAEEKFTPNPQVERPCFVDEQNLVLQPSQLESIASSSEL 171
           YCSL CFKKHKE+PCVK ++   +        VERP  VDE N VLQ  QLESIASSSE+
Sbjct: 25  YCSLVCFKKHKEIPCVKLVSPEVKTNEDSQLLVERPYLVDEPNEVLQMLQLESIASSSEI 84

Query: 170 LDALKNEELQKLICNVDNSADVDSEFDKAMEVDVFRHFTDKILSTIN 30
            DALK+++LQ+LI  +D S D ++E +KAM ++ F  FTDKILS I+
Sbjct: 85  RDALKDQDLQELINKIDQSPDAENELEKAMGIEAFSIFTDKILSAIS 131


>ref|NP_001238734.1| uncharacterized protein LOC100527614 [Glycine max]
           gi|255632778|gb|ACU16742.1| unknown [Glycine max]
          Length = 132

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/107 (54%), Positives = 74/107 (69%)
 Frame = -3

Query: 350 YCSLACFKKHKEVPCVKALAVPAEEKFTPNPQVERPCFVDEQNLVLQPSQLESIASSSEL 171
           YCSL CFKKHKE+PCVK     A+         E+P  VDE + VL+  QLE+IASSSE+
Sbjct: 25  YCSLVCFKKHKELPCVKPQPSEAKTTAVSESIAEKPLVVDESSEVLEKFQLEAIASSSEI 84

Query: 170 LDALKNEELQKLICNVDNSADVDSEFDKAMEVDVFRHFTDKILSTIN 30
            DAL ++ LQ+LIC +D S++ ++E DKAM  + FR  TDKILSTIN
Sbjct: 85  RDALNDKALQELICRIDCSSNAENELDKAMAEEAFRLLTDKILSTIN 131


>ref|XP_004146755.1| PREDICTED: zinc finger HIT domain-containing protein 3-like
           [Cucumis sativus] gi|449505659|ref|XP_004162534.1|
           PREDICTED: zinc finger HIT domain-containing protein
           3-like [Cucumis sativus]
          Length = 133

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/109 (51%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
 Frame = -3

Query: 350 YCSLACFKKHKEVPC-VKALAVPAEEKFTPNPQVERPCFVDEQNLVLQPSQLESIASSSE 174
           YCSL CFKKHKEVPC +K ++   +        V+RP  V +QN VL+ SQLE+IASSSE
Sbjct: 25  YCSLVCFKKHKEVPCAIKPVSEGDQSTACNGTFVDRPICVGDQNEVLEKSQLEAIASSSE 84

Query: 173 LLDALKNEELQKLICNVDNSADVDSEFDKAMEVDVFRHFTDKILSTINA 27
           + + L +E+LQK I  +D+S D ++E DKAME + FR F+ KI S IN+
Sbjct: 85  IHNILNDEKLQKFILAIDSSPDPETEVDKAMEDEAFRIFSSKISSIINS 133


>gb|AFK35496.1| unknown [Medicago truncatula]
          Length = 147

 Score =  103 bits (258), Expect = 1e-20
 Identities = 62/124 (50%), Positives = 77/124 (62%), Gaps = 17/124 (13%)
 Frame = -3

Query: 350 YCSLACFKKHKEVPCVKALAVPAEEK------------FTPNPQVERPC-----FVDEQN 222
           YCSLACFKKHKE+PCV     P+E K               N  VE P       VD+  
Sbjct: 25  YCSLACFKKHKELPCVDP--TPSETKTADLESHVEKPSVVDNAVVEAPVEKPLVVVDKTG 82

Query: 221 LVLQPSQLESIASSSELLDALKNEELQKLICNVDNSADVDSEFDKAMEVDVFRHFTDKIL 42
            VLQ  QLE+IASSSE+ DAL ++ LQ+LIC +D S++ ++E DKAM  + FR FT+KIL
Sbjct: 83  EVLQQFQLEAIASSSEIRDALNDKALQELICQIDCSSNAENELDKAMADEAFRLFTNKIL 142

Query: 41  STIN 30
           STIN
Sbjct: 143 STIN 146


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