BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000052
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein lig...   172   4e-62
emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]   170   4e-61
ref|XP_003601869.1| RCC1 domain-containing protein [Medicago tru...   174   4e-61
ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein lig...   170   4e-61
ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-60

>ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score =  172 bits (436), Expect(2) = 4e-62
 Identities = 82/101 (81%), Positives = 93/101 (92%)
 Frame = +1

Query: 235 LQATCSFFRQPADFAPDHELSLAEVAALDMCHKRAIFKPMSEDERQALKQKCGGSWKLVL 414
           L+ATCSFFRQPA+FAPD +LSL+E+AALDMC KRAIFKPM+ ++RQ LK +CGGSWKLVL
Sbjct: 74  LEATCSFFRQPANFAPDSDLSLSELAALDMCQKRAIFKPMTTEQRQDLKLRCGGSWKLVL 133

Query: 415 RFFIAGEACTRREKSQAIAGPGHSIAVTSKGTVYSFGSNSS 537
           R+ +AGEAC RREKSQAIAGPGHSIAVTSKG VYSFGSNSS
Sbjct: 134 RYLMAGEACCRREKSQAIAGPGHSIAVTSKGIVYSFGSNSS 174



 Score = 91.3 bits (225), Expect(2) = 4e-62
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = +3

Query: 12  SFQRQQRHCFGNATPGEFPLSANPSIFLHVLTGCNLDPQDLAKLEA 149
           +FQRQQRHCFG++TPGEFPLSANPSI LHVLT CNLDPQDLAKLEA
Sbjct: 31  TFQRQQRHCFGDSTPGEFPLSANPSIVLHVLTACNLDPQDLAKLEA 76


>emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  170 bits (431), Expect(2) = 4e-61
 Identities = 82/104 (78%), Positives = 91/104 (87%)
 Frame = +1

Query: 226 KIVLQATCSFFRQPADFAPDHELSLAEVAALDMCHKRAIFKPMSEDERQALKQKCGGSWK 405
           K+   ATCSFFRQPA FAPD ELS++E+AALDMC KRAIF+PM  +ER+ LKQ+CGGSWK
Sbjct: 73  KLEASATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMXLEEREVLKQRCGGSWK 132

Query: 406 LVLRFFIAGEACTRREKSQAIAGPGHSIAVTSKGTVYSFGSNSS 537
           LVLRF +AGEAC RREKSQAIAGPGHSIAVT KG VYSFGSNSS
Sbjct: 133 LVLRFLLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSS 176



 Score = 89.7 bits (221), Expect(2) = 4e-61
 Identities = 39/50 (78%), Positives = 45/50 (90%)
 Frame = +3

Query: 12  SFQRQQRHCFGNATPGEFPLSANPSIFLHVLTGCNLDPQDLAKLEARTLC 161
           +FQRQQRHCFG+++PGEFPL+ANPSI LHVLT CNL+PQDLAKLEA   C
Sbjct: 31  TFQRQQRHCFGDSSPGEFPLAANPSIVLHVLTACNLEPQDLAKLEASATC 80


>ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
           gi|355490917|gb|AES72120.1| RCC1 domain-containing
           protein [Medicago truncatula]
          Length = 535

 Score =  174 bits (441), Expect(2) = 4e-61
 Identities = 84/101 (83%), Positives = 92/101 (91%)
 Frame = +1

Query: 235 LQATCSFFRQPADFAPDHELSLAEVAALDMCHKRAIFKPMSEDERQALKQKCGGSWKLVL 414
           L+ATCSFFRQPA+FAPD  LSLAE+AA DMC KRAIFKPM+ +ERQ LKQ+CGGSWKLVL
Sbjct: 75  LEATCSFFRQPANFAPDFALSLAELAAFDMCMKRAIFKPMTTEERQDLKQRCGGSWKLVL 134

Query: 415 RFFIAGEACTRREKSQAIAGPGHSIAVTSKGTVYSFGSNSS 537
           R+ +AGEAC RREKSQAIAGPGHSIAVTSKG VYSFGSNSS
Sbjct: 135 RYLLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSS 175



 Score = 85.9 bits (211), Expect(2) = 4e-61
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = +3

Query: 12  SFQRQQRHCFGNATPGEFPLSANPSIFLHVLTGCNLDPQDLAKLEA 149
           +FQRQQR C GN+TPGEFPLSA+PSI LHVLT CNLDPQDLAKLEA
Sbjct: 32  TFQRQQRQCLGNSTPGEFPLSASPSIVLHVLTSCNLDPQDLAKLEA 77


>ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  170 bits (431), Expect(2) = 4e-61
 Identities = 81/101 (80%), Positives = 92/101 (91%)
 Frame = +1

Query: 235 LQATCSFFRQPADFAPDHELSLAEVAALDMCHKRAIFKPMSEDERQALKQKCGGSWKLVL 414
           L+ATCSFFRQPA+FAPD +LSL+E+AALDMC KRAIFKPM+ ++RQ LK +CGGSWKL L
Sbjct: 74  LEATCSFFRQPANFAPDLDLSLSELAALDMCQKRAIFKPMTTEQRQDLKLRCGGSWKLAL 133

Query: 415 RFFIAGEACTRREKSQAIAGPGHSIAVTSKGTVYSFGSNSS 537
           R+ +AGEAC RREKSQAIAGPGHSIAVTSKG VYSFGSNSS
Sbjct: 134 RYLMAGEACCRREKSQAIAGPGHSIAVTSKGVVYSFGSNSS 174



 Score = 89.7 bits (221), Expect(2) = 4e-61
 Identities = 40/46 (86%), Positives = 44/46 (95%)
 Frame = +3

Query: 12  SFQRQQRHCFGNATPGEFPLSANPSIFLHVLTGCNLDPQDLAKLEA 149
           +FQRQQRHCFG++TPGEFPLSANPSI LHVLT CNL+PQDLAKLEA
Sbjct: 31  TFQRQQRHCFGDSTPGEFPLSANPSIVLHVLTACNLEPQDLAKLEA 76


>ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  172 bits (436), Expect(2) = 2e-60
 Identities = 81/99 (81%), Positives = 90/99 (90%)
 Frame = +1

Query: 241 ATCSFFRQPADFAPDHELSLAEVAALDMCHKRAIFKPMSEDERQALKQKCGGSWKLVLRF 420
           ATCSFFRQPA FAPD+ELS++E+AALDMC KRAIFKPM+ +ERQ LKQ+CGGSWKLVLRF
Sbjct: 80  ATCSFFRQPASFAPDYELSMSELAALDMCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRF 139

Query: 421 FIAGEACTRREKSQAIAGPGHSIAVTSKGTVYSFGSNSS 537
            +AGEAC RRE+SQAIAGPGHSIAVTS G  YSFGSNSS
Sbjct: 140 LLAGEACCRRERSQAIAGPGHSIAVTSNGVAYSFGSNSS 178



 Score = 85.9 bits (211), Expect(2) = 2e-60
 Identities = 37/49 (75%), Positives = 45/49 (91%)
 Frame = +3

Query: 12  SFQRQQRHCFGNATPGEFPLSANPSIFLHVLTGCNLDPQDLAKLEARTL 158
           ++QR QRHCFG++ PGEFPL+ANPSI LHVLT CNLDPQDLAKLEA+++
Sbjct: 31  TYQRNQRHCFGDSIPGEFPLAANPSIVLHVLTTCNLDPQDLAKLEAKSI 79