BLASTX nr result

ID: Bupleurum21_contig00000051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000051
         (1225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531858.1| PREDICTED: ninja-family protein AFP2-like [G...    99   1e-38
ref|XP_003562743.1| PREDICTED: ninja-family protein 3-like [Brac...    91   8e-28
ref|XP_003557721.1| PREDICTED: ninja-family protein Os03g0419100...    84   4e-24
ref|XP_002277117.1| PREDICTED: ninja-family protein AFP2-like [V...   106   1e-20
emb|CAN77669.1| hypothetical protein VITISV_038107 [Vitis vinifera]   106   1e-20

>ref|XP_003531858.1| PREDICTED: ninja-family protein AFP2-like [Glycine max]
          Length = 383

 Score = 99.4 bits (246), Expect(2) = 1e-38
 Identities = 47/118 (39%), Positives = 72/118 (61%)
 Frame = +3

Query: 870  LETQETPATNKSPEDRSPASGRSSVEQTPENKPAEIVMENASPIAEVRPPGPKDIEAMKK 1049
            ++ +   + N  P+    +    +   T +N  A +V    S   +  PP  +  + ++ 
Sbjct: 253  MDVRSPTSANLLPDSELKSPAGVAENNTGKNAAAAVVTMR-SQSNKHSPPQSRTKDIVRN 311

Query: 1050 ILGNMPCVSTREIGPDGKRIKGFLYKCNNGEELKIICACHGNFLSPDEFVKHGGGGDV 1223
            +L +MPCVST+  GP+GKRI+GFLY+   GEE++I+C CHG+FL+P EFVKH GGGDV
Sbjct: 312  LLEDMPCVSTKGEGPNGKRIEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKHAGGGDV 369



 Score = 88.6 bits (218), Expect(2) = 1e-38
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
 Frame = +1

Query: 361 EDGIELSLGLSLNGRFGVEPKRCNNIVRASSISGYMIGSGRKDPERLSLDGSHEAGGLSR 540
           E+ +ELSL LS+NGRFGV+P     I R +SI  +         + +        G L R
Sbjct: 68  EEELELSLDLSMNGRFGVDPT-AKKIKRTTSIPEFA------SDKEMGFATVGCTGSLVR 120

Query: 541 TCSLPMEVDE-WRKRKELQTLKRLEAKRKRMEKLKNVRMVREK------VVGDYGRIA-- 693
           TCSLP E +E WRKRKELQTL+R+EA+RKR EK +N++ +RE+      VVG  G     
Sbjct: 121 TCSLPTETEEEWRKRKELQTLRRMEARRKRSEKQRNMKALREQQQRVVGVVGSQGSNPVD 180

Query: 694 ------GDEVVGPPVVLGKKNSVQFCSQGSIG 771
                 G+  V PP+      + + C  G  G
Sbjct: 181 QGAGEYGEVAVAPPLARTVSLTTRVCGLGLNG 212


>ref|XP_003562743.1| PREDICTED: ninja-family protein 3-like [Brachypodium distachyon]
          Length = 335

 Score = 90.5 bits (223), Expect(2) = 8e-28
 Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
 Frame = +3

Query: 873  ETQETPATNKSPEDRSPASGRSSVEQTPENKPA-EIVMENASPIAEVRPPGPKDIEAM-- 1043
            E + T +   S ++ +  S +S     P   PA +      +  A+ +PP P  +  +  
Sbjct: 187  EARSTSSMETSSDNNNNGSNQSKSLPPPAPTPAGKPPAPPPNGTAKEQPPPPPPLRTLRS 246

Query: 1044 ------------KKILGNMPCVSTREIGPDGKRIKGFLYKCNNGEELKIICACHGNFLSP 1187
                        K ++ +MP VS++  GP+GK+I GFLYK   GEE++I+C CHGNFL+P
Sbjct: 247  LTMRTTSTGDLRKSMMEDMPMVSSKVDGPNGKKIDGFLYKYRKGEEVRIVCVCHGNFLTP 306

Query: 1188 DEFVKHGGGGDV 1223
             EFVKH GGGDV
Sbjct: 307  AEFVKHAGGGDV 318



 Score = 60.8 bits (146), Expect(2) = 8e-28
 Identities = 57/151 (37%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
 Frame = +1

Query: 361 EDGIELSLGLSLNGRFGVEPKRCNN-----IVRASSISGYMI----GSGRKDPERLSLDG 513
           E+ +ELSLGLSL G FG    R        + R+SSI         G G    E   L  
Sbjct: 30  EEAVELSLGLSLGGCFGASSGRDAKKPRLQLARSSSIGSMCSLPAGGGGGAGSENDDLAA 89

Query: 514 SHEAGG-LSRTCSLPMEVDEWR-KRKELQTLKRLEAKRKRMEKLKNVRMVREKVVGDYGR 687
           +  A   L RT SLP E +E R +R+E+Q+LKRL+AKRKR+E+  ++        G  G 
Sbjct: 90  ATPAPAPLMRTSSLPAETEEERWRRREMQSLKRLQAKRKRLERRNSMNS------GKSGG 143

Query: 688 IAGD--EVVGPPVVLGKKNSVQFCSQGSIGS 774
            AGD  E + P     +++ V   SQGS  S
Sbjct: 144 GAGDAQEPLYPSAFQLRRSVV---SQGSTSS 171


>ref|XP_003557721.1| PREDICTED: ninja-family protein Os03g0419100-like [Brachypodium
            distachyon]
          Length = 303

 Score = 84.0 bits (206), Expect(2) = 4e-24
 Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = +3

Query: 876  TQETPATNKSPEDRSPASGRSSVEQTPENKPAEIVMENASPIAEVRPPGPKDIEAMKKIL 1055
            ++ T   N  P   + A+ R+  EQ P  +    +    +  +++R          K ++
Sbjct: 180  SEYTDQNNVLPLSVTRAAERAGAEQQPPLRTLGSLTMRTNSSSDMR----------KSMM 229

Query: 1056 GNMPCVSTREIGPDGKRIKGFLYKCNNGEE-LKIICACHGNFLSPDEFVKHGGGGDV 1223
             +MP VS++  GPDGK+I GFLY+   G E ++I+C CHGNFL+P EFVKH GGGDV
Sbjct: 230  EDMPMVSSKVEGPDGKKIDGFLYRYRKGGEGVRIVCVCHGNFLTPAEFVKHAGGGDV 286



 Score = 55.1 bits (131), Expect(2) = 4e-24
 Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
 Frame = +1

Query: 358 EEDGIELSLGLSLNGRFGVE---PKRCNNIVRASSIS---GYMIGSGRKDPERLSLDGSH 519
           E D IEL LGL L  RFG +     +   ++R++SI+       G G  DP   S     
Sbjct: 28  ESDEIELGLGLCLGSRFGTDRSPDAKRPRLLRSTSIASTCSVSAGDGDGDPSPAS----- 82

Query: 520 EAGGLSRTCSLPMEVDEWR-KRKELQTLKRLEAKRKRMEKLKNVRMVREKVVGDYGRIAG 696
               L RT SLPM+ +E R +R+E+Q+ +RLEA+RK + +       R  +    G    
Sbjct: 83  -PLQLLRTSSLPMDTEEERWRRREMQSRRRLEARRKMLGR-------RSSMGSSSGPCKP 134

Query: 697 DEVVGPPVVLGKKNSVQFCSQGSIGS 774
           D+  G  VV G +      SQGS  S
Sbjct: 135 DKEDGDDVVNGLQLKRSTGSQGSSSS 160


>ref|XP_002277117.1| PREDICTED: ninja-family protein AFP2-like [Vitis vinifera]
          Length = 367

 Score =  106 bits (264), Expect = 1e-20
 Identities = 68/128 (53%), Positives = 81/128 (63%), Gaps = 2/128 (1%)
 Frame = +1

Query: 289 DLLQRFKIKNDLVGKLHEINEASEEDG-IELSLGLSLNGRFGVEPKRCNNIVRASSISGY 465
           DLLQR    N    K  E   ASEE G IELSLGLSLNGRFGV+PK+   + R+SSIS +
Sbjct: 7   DLLQRVIAGNLFPRKFEEA--ASEETGEIELSLGLSLNGRFGVDPKKAKMLTRSSSISDF 64

Query: 466 MIGSGRKDPERLSLDGSHEAGGLSRTCSLPMEV-DEWRKRKELQTLKRLEAKRKRMEKLK 642
           M     +D     L        L+RTCSLPME  +EWRKRKELQTL+RLEAKRKR  K +
Sbjct: 65  MTPLRYQDRASTVL----PITALTRTCSLPMETEEEWRKRKELQTLRRLEAKRKRTAKQR 120

Query: 643 NVRMVREK 666
           + +  R +
Sbjct: 121 SYKTARSR 128



 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 55/129 (42%), Positives = 71/129 (55%), Gaps = 12/129 (9%)
 Frame = +3

Query: 873  ETQETPATNKSPEDRSPASGRSSVEQ----------TPEN--KPAEIVMENASPIAEVRP 1016
            +  +    NK  E RSPAS +S   Q          TPE   K   +V EN      +  
Sbjct: 226  QPMQVKGVNKCSEARSPASIQSLPGQSEQKPLISPGTPEKSGKVGGVVAENQPKKPTISS 285

Query: 1017 PGPKDIEAMKKILGNMPCVSTREIGPDGKRIKGFLYKCNNGEELKIICACHGNFLSPDEF 1196
             G    E  +K++ +MPCVST   GP+GK++ GFLY+   GEE++I+C CHG FLSP EF
Sbjct: 286  RGVS--EMARKVMEDMPCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEF 343

Query: 1197 VKHGGGGDV 1223
            VKH GG DV
Sbjct: 344  VKHAGGSDV 352


>emb|CAN77669.1| hypothetical protein VITISV_038107 [Vitis vinifera]
          Length = 1100

 Score =  106 bits (264), Expect = 1e-20
 Identities = 68/128 (53%), Positives = 81/128 (63%), Gaps = 2/128 (1%)
 Frame = +1

Query: 289  DLLQRFKIKNDLVGKLHEINEASEEDG-IELSLGLSLNGRFGVEPKRCNNIVRASSISGY 465
            DLLQR    N    K  E   ASEE G IELSLGLSLNGRFGV+PK+   + R+SSIS +
Sbjct: 740  DLLQRVIAGNLFPRKFEEA--ASEETGEIELSLGLSLNGRFGVDPKKAKMLTRSSSISDF 797

Query: 466  MIGSGRKDPERLSLDGSHEAGGLSRTCSLPMEV-DEWRKRKELQTLKRLEAKRKRMEKLK 642
            M     +D     L        L+RTCSLPME  +EWRKRKELQTL+RLEAKRKR  K +
Sbjct: 798  MTPLRYQDRASTVL----PITALTRTCSLPMETEEEWRKRKELQTLRRLEAKRKRTAKQR 853

Query: 643  NVRMVREK 666
            + +  R +
Sbjct: 854  SYKTARSR 861



 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 55/129 (42%), Positives = 71/129 (55%), Gaps = 12/129 (9%)
 Frame = +3

Query: 873  ETQETPATNKSPEDRSPASGRSSVEQ----------TPEN--KPAEIVMENASPIAEVRP 1016
            +  +    NK  E RSPAS +S   Q          TPE   K   +V EN      +  
Sbjct: 959  QPMQVKGVNKCSEARSPASIQSLPGQSEQKPLISPGTPEKSGKVGGVVAENQPKKPTISS 1018

Query: 1017 PGPKDIEAMKKILGNMPCVSTREIGPDGKRIKGFLYKCNNGEELKIICACHGNFLSPDEF 1196
             G    E  +K++ +MPCVST   GP+GK++ GFLY+   GEE++I+C CHG FLSP EF
Sbjct: 1019 RGVS--EMARKVMEDMPCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEF 1076

Query: 1197 VKHGGGGDV 1223
            VKH GG DV
Sbjct: 1077 VKHAGGSDV 1085


Top